prot_P-wetherbeei_contig18410.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig18410.2.1
Unique Nameprot_P-wetherbeei_contig18410.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length103
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18410.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 3..103
e-value: 1.1E-26
score: 96.0
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 49..82
e-value: 4.3E-6
score: 24.6
coord: 13..47
e-value: 4.3E-6
score: 24.5
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 9..59
e-value: 2.2E-9
score: 37.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 46..80
score: 10.687325
NoneNo IPR availablePANTHERPTHR47942TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 8..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18410contigP-wetherbeei_contig18410:389..828 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18410.2.1mRNA_P-wetherbeei_contig18410.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig18410 389..855 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig18410.2.1 ID=prot_P-wetherbeei_contig18410.2.1|Name=mRNA_P-wetherbeei_contig18410.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=103bp
MEPIHKVKPDNTSYSSLINALAEDGQSRAACALLKEMTDCSGLAPNVVAF
GTAIKACARGGDWRQALDILDGMPAVGVQPNIIAVNTALAACARAGRAAE
AIG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat