prot_P-wetherbeei_contig18404.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig18404.1.1
Unique Nameprot_P-wetherbeei_contig18404.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length63
Homology
BLAST of mRNA_P-wetherbeei_contig18404.1.1 vs. uniprot
Match: D8LBR5_ECTSI (Vesicle coat complex COPII, subunit SEC31 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBR5_ECTSI)

HSP 1 Score: 74.7 bits (182), Expect = 3.670e-14
Identity = 35/62 (56.45%), Postives = 46/62 (74.19%), Query Frame = 0
Query:    1 MGKGVLEAEVLAKVSQFVALLQSRETHGATAVHTDLVNTAWGAHKDWLKGIKHLTTLVAKKL 62
            MG+G +E E LAKV Q V  LQ+R+   A AV   L N+AW +HKDWLKG+K+LTTLV+++L
Sbjct:  880 MGRGQVEQETLAKVGQLVESLQARDIKRAGAVQQGLANSAWASHKDWLKGLKYLTTLVSRRL 941          
BLAST of mRNA_P-wetherbeei_contig18404.1.1 vs. uniprot
Match: A0A6H5KCD9_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCD9_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 6.880e-14
Identity = 35/62 (56.45%), Postives = 45/62 (72.58%), Query Frame = 0
Query:    1 MGKGVLEAEVLAKVSQFVALLQSRETHGATAVHTDLVNTAWGAHKDWLKGIKHLTTLVAKKL 62
            MG+G LE E LAKV   V  LQ+R+   A AV   L N+AW +HKDWLKG+K+LTTLV+++L
Sbjct: 1226 MGRGQLEQETLAKVGHLVESLQARDIKRAGAVQQGLANSAWASHKDWLKGLKYLTTLVSRRL 1287          
BLAST of mRNA_P-wetherbeei_contig18404.1.1 vs. uniprot
Match: A0A482RQQ0_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RQQ0_9ARCH)

HSP 1 Score: 58.9 bits (141), Expect = 5.930e-10
Identity = 26/56 (46.43%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    6 LEAEVLAKVSQFVALLQSRETHGATAVHTDLVNTAWGAHKDWLKGIKHLTTLVAKK 61
            ++  VLAK+  F+  + +R   GA+AV TDL NTAW  HK+W+KG+K+L  L ++K
Sbjct:   31 VDGGVLAKLGVFMEHMANRNFPGASAVQTDLANTAWSEHKEWVKGLKNLIQLASRK 86          
BLAST of mRNA_P-wetherbeei_contig18404.1.1 vs. uniprot
Match: A0A7S2KGC2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KGC2_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 2.060e-9
Identity = 27/62 (43.55%), Postives = 39/62 (62.90%), Query Frame = 0
Query:    1 MGKGVLEAEVLAKVSQFVALLQSRETHGATAVHTDLVNTAWGAHKDWLKGIKHLTTLVAKKL 62
            M +G++  +V  KV +  + +Q+R  HGAT++ T LVN+ W  HKDWL+G K L  L  K L
Sbjct: 1038 MARGMVTGDVCDKVGELASAIQNRNYHGATSIQTQLVNSEWKLHKDWLRGTKLLIQLATKFL 1099          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18404.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LBR5_ECTSI3.670e-1456.45Vesicle coat complex COPII, subunit SEC31 n=1 Tax=... [more]
A0A6H5KCD9_9PHAE6.880e-1456.45WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A482RQQ0_9ARCH5.930e-1046.43Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S2KGC2_9STRA2.060e-943.55Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.940.10Functional domain of the splicing factor Prp18coord: 1..61
e-value: 1.3E-8
score: 36.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18404contigP-wetherbeei_contig18404:1050..1238 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18404.1.1mRNA_P-wetherbeei_contig18404.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig18404 1050..1256 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig18404.1.1 ID=prot_P-wetherbeei_contig18404.1.1|Name=mRNA_P-wetherbeei_contig18404.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=63bp
MGKGVLEAEVLAKVSQFVALLQSRETHGATAVHTDLVNTAWGAHKDWLKG
IKHLTTLVAKKL*
back to top