prot_P-wetherbeei_contig1840.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1840.2.1
Unique Nameprot_P-wetherbeei_contig1840.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length450
Homology
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BLAST of mRNA_P-wetherbeei_contig1840.2.1 vs. uniprot
Match: D7FQC9_ECTSI (SMC_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQC9_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 8.380e-19
Identity = 99/296 (33.45%), Postives = 130/296 (43.92%), Query Frame = 0 
Query:  137 DPAALLRQLEEAGSANRAAHAALSRAAEGRRRKLAALRSRLGDAPWHAALRRGGSGSSSGNXXXXXXXXXXXXXXXXXXXXXXAKASGHRGPLFDLVHVAKGNPAAAAEAARCRDALAAILGGHLVVWICETAAEAGAALDAARAAGAAIRVWPREHLAAAASSESGATGQWAAVRRQRLAEARHVAGNTDAAVMAASFLAPSVLPSAAAVAPGSDSVMDPASLLEWDEADPAVDAAARRVLGDVFITADDATSAALLSCSGVRSVTRTGRRHSPGELVSSASAAAGRAAAAWLEY 432
            D    LR +++  S  R     LSRA E  R+ LAA R R+G   W + L   G G                               GHRG LF++  + +G      +    + ALA++L G L VW+CE+   A  ALD A++  A +RVWP   L AA  +  G  G+   VR+                           L  A    PG   V DPASLL WDE D  V AA  + LG   ITADD TSA +L   G+ SVT +G RH+PGE+V  A+   G    A L++
Sbjct:  258 DAEMYLRGVKDQRSIQRERQLDLSRALESSRQSLAAARRRVGAPQWCSQLVYSGGGGG-----------------------------GHRGFLFEVFEIRRG----LGDEGHLQ-ALASLLAGSLSVWVCESPQHADQALDLAKSNAAGLRVWPIARLKAATRASRG-QGRSGRVRQ--------------------------ALEWAERKWPGQGKVTDPASLLAWDEEDEGVTAAVDKALGTWVITADDDTSALVLDELGMSSVTLSGVRHAPGEVVGGAAQGEGARLRAKLDW 492
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1840.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FQC9_ECTSI8.380e-1933.45SMC_N domain-containing protein n=1 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 60..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..219
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 184..222
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1840contigP-wetherbeei_contig1840:3599..4948 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1840.2.1mRNA_P-wetherbeei_contig1840.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1840 3599..4949 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1840.2.1 ID=prot_P-wetherbeei_contig1840.2.1|Name=mRNA_P-wetherbeei_contig1840.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=450bp
GSGGAAGGSNAAAAAAVLRERRQAAAALCGAAGRLKATAATMAADAAGLV
AEAGAARDTLLRVESQADSVEQEAAAAEALVAAALAGCQGNGDSVGCGGG
GGGGSGGSGCWGGVIHGCRSDTPNADSAGSAGGGGGDPAALLRQLEEAGS
ANRAAHAALSRAAEGRRRKLAALRSRLGDAPWHAALRRGGSGSSSGNRGS
GSGNSGCGISGSGDGSSGTAKASGHRGPLFDLVHVAKGNPAAAAEAARCR
DALAAILGGHLVVWICETAAEAGAALDAARAAGAAIRVWPREHLAAAASS
ESGATGQWAAVRRQRLAEARHVAGNTDAAVMAASFLAPSVLPSAAAVAPG
SDSVMDPASLLEWDEADPAVDAAARRVLGDVFITADDATSAALLSCSGVR
SVTRTGRRHSPGELVSSASAAAGRAAAAWLEYGALVAAAEHDCGHSEALV
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