mRNA_P-wetherbeei_contig18392.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18392.1.1
Unique NamemRNA_P-wetherbeei_contig18392.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18392.1.1 vs. uniprot
Match: UPI0002D2B014 (fumarylacetoacetate hydrolase family protein n=1 Tax=Nocardia jiangxiensis TaxID=282685 RepID=UPI0002D2B014)

HSP 1 Score: 151 bits (381), Expect = 5.890e-40
Identity = 103/312 (33.01%), Postives = 156/312 (50.00%), Query Frame = 1
Query:   31 GIGTIIDAGNAATAVVVNDQVCRLADIVARHSTPGAAAPQ--MRDFMPDWDRWHNWLRNLDLDPAKEEGWQPIDAVQFSAPVPEPWNIF---QTYHNFDRPSRISGKVDPPKAERLLPDMFMASRSSLAGFGETIYREHGGYQFDFELEVTAIIGKPAFRVPAERADEYIAGYAIANDYTMHFSWWTKLREGRRTNDS------IRMKNFPGYTPMSRVIVPRDLVGDPHDLGVKVTVDGVLRQDTRTNAMLWRVPELVEYLSHVMPLKPGDLIITGSPEELPLPPGEKKGLRNGQVVVCEVEKLGRLSNTI 933
            G+ TI+     A A+  +  V  LA+   RH   GA AP   +R  + DWDRW + L     D   + GW    AV F   + +P  I+     YH+  R  R +     P+     P  F+   +SLAG      R  G  + D+E+E+  IIG+ A R+PA +A   IAGY +AND +        LR+    +D+      + MK++ G TP+   IVP + V DP +L + ++V+G  RQ + T  M++ + E +EYLS ++PL+ GD+I+TG+P        +   L  G  VV E+  +GRL   I
Sbjct:   11 GLATILLENTPALAIWADGFVLPLAEAARRH---GAGAPPSCIRAALTDWDRWCDLLEYARNDGVGDTGWLAETAVDFLPAITDPPTIYCAATNYHDHIREMRSTKTFAAPRT----PMYFLVPPASLAGHRGATARPDGCERLDWEVELAVIIGREADRIPAAQAHRVIAGYTVANDLS--------LRDFAHRDDTPFFPDRLAMKSYAGCTPLGPAIVPAECVPDPMNLELALSVNGERRQGSTTANMVFSIAEQIEYLSRIVPLRAGDVILTGTPAGTAAA-WDGAYLSPGDTVVAEIRGVGRLETRI 306          
BLAST of mRNA_P-wetherbeei_contig18392.1.1 vs. uniprot
Match: A0A0N7F443_9PSEU (FAA_hydrolase domain-containing protein n=1 Tax=Kibdelosporangium phytohabitans TaxID=860235 RepID=A0A0N7F443_9PSEU)

HSP 1 Score: 144 bits (364), Expect = 1.020e-37
Identity = 91/267 (34.08%), Postives = 139/267 (52.06%), Query Frame = 1
Query:  133 GAAAPQMRDFMPDWDRWHNWLRNLDLDPAKEEGWQPIDAVQFSAPVPEPWNIFQTYHNFDRPSRISGKVDPPKAERLLPDMFMASRSSLAGFGETIYREHGGYQFDFELEVTAIIGKPAFRVPAERADEYIAGYAIANDYTMHFSWWTKLREGRRTNDSIRMKNFPGYTPMSRVIVPRDLVGDPHDLGVKVTVDGVLRQDTRTNAMLWRVPELVEYLSHVMPLKPGDLIITGSPEELPLPPGEKKGLRNGQVVVCEVEKLGRLSNTI 933
            G   P +R  + DWD   + L + D      +   P   V F  P+ +P  I+    N+   +R  G  DPP+A       F+ S +SL G   T++R  G  + D+E+E+  +IG+PA  +    A ++IAGY +AND +        +R      D +R K++ G+TP+   IVPR LV D  DL + +TV+G ++Q + TN M+  V + V  LS + PL+PGD+++TG+P       G    L  G VVV E+  +GRL N I
Sbjct:   27 GVTTPTVRATLSDWDTLCDLLEDADRSGKLAKLSTPDTDVTFLPPLADPPAIYCAGANYHDHAREMG-TDPPQATF----HFLVSPASLTGHRSTVHRPEGCQRLDWEVELAIVIGRPASAIHPAAAADHIAGYTVANDLSAR----DHVRASGLGIDWLRHKSYAGFTPLGPAIVPRRLVPDATDLELTLTVNGQVKQHSNTNQMISGVGDQVAALSRIAPLRPGDVVLTGTPAGTAAAHGHY--LHPGDVVVAEITGIGRLENRI 282          
BLAST of mRNA_P-wetherbeei_contig18392.1.1 vs. uniprot
Match: K4QY12_STRDJ (Hydrolase n=1 Tax=Streptomyces davaonensis (strain DSM 101723 / JCM 4913 / KCC S-0913 / 768) TaxID=1214101 RepID=K4QY12_STRDJ)

HSP 1 Score: 143 bits (361), Expect = 7.820e-37
Identity = 109/317 (34.38%), Postives = 156/317 (49.21%), Query Frame = 1
Query:   28 FGIGTIIDAGNAATAVVVNDQVCRLADIVARHSTPGAAAPQMRDFMPDWDRWHNWLRNLDLDPAKEEGWQPIDAVQFSAPVPEPWNIFQTYHNF--------------DRP-------SRISGKVDPPKAERLLPDMFMASRSSLAGFGETIYREHGGYQFDFELEVTAIIGKPAFRVPAERADEYIAGYAIANDYTMHFSWWTKLREGRRTNDSIRMKNFPGYTPMSRVIVPRDLVGDPHDLGVKVTVDGVLRQDTRTNAMLWRVPELVEYLSHVMPLKPGDLIITGSPEELPLPPGEKKGLRNGQVVVCEVEKLG 915
            F +GT+   G A    +V  +  R AD+      P   A   R     WD     LR L  DP  E  WQP+D +   APV EP  +FQ+  N+              D P       + I+  +D   AE L P +F+   S++ G  + +       Q D+ELE+ A+IG+PA+RVP E A ++IAGY IAND T   + + +  +   T D +R KN PG+TP+   IVP + V DP +L V + ++G   QD  T  M++ V  +V Y S    L PGDL++TGSP    +  G    LR+G V+   +  LG
Sbjct:   10 FALGTLSAPGQAPFPALVTPEQ-RAADLRTALGDPALTA---RAVFERWDEVQPRLRALAADP--EAAWQPLDGLTVHAPV-EPRQVFQSGANYRQHVIDLEVAHRAPDDPRTVEEARTEIAAIMDRRAAEDL-PYVFIGLPSAITGPYDDVLLPAWAEQPDWELELAAVIGRPAYRVPVEEALDHIAGYTIANDLTDRATVFRRDMKAIGT-DWLRSKNAPGFTPLGPWIVPAESVTDPGELRVTLKLNGETMQDESTKDMIFGVARMVSYASQAAQLLPGDLVLTGSPAGNGMHWGRL--LRDGDVMEGSITGLG 315          
BLAST of mRNA_P-wetherbeei_contig18392.1.1 vs. uniprot
Match: A0A6I1Z6L7_9ACTN (FAA_hydrolase domain-containing protein n=3 Tax=Streptomyces TaxID=1883 RepID=A0A6I1Z6L7_9ACTN)

HSP 1 Score: 142 bits (359), Expect = 1.600e-36
Identity = 109/318 (34.28%), Postives = 157/318 (49.37%), Query Frame = 1
Query:   28 FGIGTIIDA-GNAATAVVVNDQVCRLADIVARHSTPGAAAPQMRDFMPDWDRWHNWLRNLDLDPAKEEGWQPIDAVQFSAPVPEPWNIFQTYHNF--------------DRP-------SRISGKVDPPKAERLLPDMFMASRSSLAGFGETIYREHGGYQFDFELEVTAIIGKPAFRVPAERADEYIAGYAIANDYTMHFSWWTKLREGRRTNDSIRMKNFPGYTPMSRVIVPRDLVGDPHDLGVKVTVDGVLRQDTRTNAMLWRVPELVEYLSHVMPLKPGDLIITGSPEELPLPPGEKKGLRNGQVVVCEVEKLG 915
            F +GT+    GN    +VV D+V  L+  +A           +R  +  W+     L  L  +   E  WQP+D +Q  APV EP  IFQ+  N+              D P       + I+  +D   AE L P +F+   S++ G  + +       Q D+ELE+ A+I KPA+RVP E A EY+AGY IAND T   + + +  +   T D +R KN PG+TP+   IVP   + DP DL V + ++G   QD  T  ML+ +  LV Y+S    L PGDL++TGSP    +  G    LR+G V+   +  LG
Sbjct:   11 FALGTLSTPDGNPFPGLVVRDRVLDLSQALAWKPA------DVRSVLERWEETLPVLHTLAGEDTLE--WQPLDGLQVHAPV-EPRQIFQSGANYRQHVIDLEVAHRSPDDPRTVEEARAEIAAVMDRRAAEDL-PYVFIGLASAITGPYDDVVLPAWAEQPDWELELAAVIAKPAYRVPVEAALEYVAGYTIANDLTDRATVFRRDMKAIGT-DWLRSKNAPGFTPLGPWIVPAGSIADPGDLRVTLKLNGETMQDESTKDMLFGIARLVSYVSQTARLLPGDLVLTGSPAGNGIHWGRL--LRDGDVMEGSITGLG 315          
BLAST of mRNA_P-wetherbeei_contig18392.1.1 vs. uniprot
Match: UPI001FE20196 (fumarylacetoacetate hydrolase family protein n=1 Tax=Nocardia jiangxiensis TaxID=282685 RepID=UPI001FE20196)

HSP 1 Score: 141 bits (355), Expect = 5.770e-36
Identity = 103/311 (33.12%), Postives = 157/311 (50.48%), Query Frame = 1
Query:   31 GIGTIIDAGNAATAVVVNDQVCRLADIVAR---HSTPGAAAPQMRDFMPDWDRWHNWLRNLDLDPAKEEGWQPIDAVQFSAPVPEPWNIFQTYHNF-DRPSRISGKVDPPKAERLLPDMFMASRSSLAGFGETIYREHGGYQFDFELEVTAIIGKPAFRVPAERADEYIAGYAIANDYTMHFSWWTKLREGRRTNDS------IRMKNFPGYTPMSRVIVPRDLVGDPHDLGVKVTVDGVLRQDTRTNAMLWRVPELVEYLSHVMPLKPGDLIITGSPEELPLPPGEKKGLRNGQVVVCEVEKLGRLSNTI 933
            G+ TI        A+  N  V  LA+   R    S PG+A    R  + DW+ W + +  +  D    EGW P   V+F  P  +   ++ T  N+ D    +SG  +  +A    P  F+A  +SLAG      R  G  +FD+E+E+  +IG+ A++VPA  A   IAGYA+A+D +        LR+  R  D+      + MK   G TP+  V+VP   V DP +L + ++V+G  RQ + T  M++ + E +EYLS ++PL+PGD+I+TG+P         K  L  G  VV E+  +G+L   I
Sbjct:   10 GLATISLDSAPTLAIWANGHVLPLAEAAPRVGSDSVPGSA----RTALLDWESWCSLIDRVSAD-VGGEGWLPDTEVEFR-PAIDASTVYCTAANYHDHIREMSGTTERSQARA--PLYFLAPPASLAGHRGAAARPDGCQRFDWEVELAVVIGRRAWQVPAGDAYTVIAGYAVADDLS--------LRDFARREDTPFFPDWLGMKGHAGCTPIGPVLVPAAAVPDPMNLELSLSVNGERRQHSNTAEMIFSIAEQIEYLSGIVPLRPGDVILTGTPAGTGA--AWKSFLAPGDTVVAEIGGVGQLETRI 302          
BLAST of mRNA_P-wetherbeei_contig18392.1.1 vs. uniprot
Match: A0A100JQE0_STRSC (Ureidoglycolate lyase n=6 Tax=Streptomyces TaxID=1883 RepID=A0A100JQE0_STRSC)

HSP 1 Score: 140 bits (353), Expect = 1.290e-35
Identity = 110/324 (33.95%), Postives = 158/324 (48.77%), Query Frame = 1
Query:    7 SGKFETLFGIGTIIDAG-NAATAVVVNDQVCRLADIVARHSTPGAAAPQMRDFMPDWDRWHNWLRNLDLDPAKEEGWQPIDAVQFSAPVPEPWNIFQTYHNF--------------DRPSRIS------GKVDPPKAERLLPDMFMASRSSLAGFGETIYREHGGYQFDFELEVTAIIGKPAFRVPAERADEYIAGYAIANDYTMHFSWWTKLREGRRTNDSIRMKNFPGYTPMSRVIVPRDLVGDPHDLGVKVTVDGVLRQDTRTNAMLWRVPELVEYLSHVMPLKPGDLIITGSPEELPLPPGEKKGLRNGQVVVCEVEKLG 915
            S  F   F +GT+  AG +   A+VV  +  R+ D+ A    P   A   R  +  WD     LR L  D A +  W P+D ++  APV EP  +FQ+  N+              D P  +        +V   +A   LP +F+   S++ G  + +       Q D+ELE+ A+I KPA +V  E A EYIAGY IAND T   + + +   G  T D +  KN PG+TP+   IVP + + DP DL V + ++G   QD  T  ML+ +  LV Y+S    L PGDL++TGSP    +  G    LR+G V+   +  LG
Sbjct:    7 SPTFSGPFALGTVSAAGRDPFPALVVPGR--RVLDLRAALGAPELTA---RTLLEGWDEVLPRLRALAADTAGD--WLPLDGLRVHAPV-EPRQVFQSGANYRQHVIDLAVAHRAPDDPRTVEEARAEFAEVMDRRAREDLPYVFIGLPSAITGPYDDVVLPAWATQPDWELELAAVIAKPAHQVSVEEAPEYIAGYTIANDLTDRATVFRQDMPGIGT-DWLHSKNAPGFTPLGPWIVPAESIADPGDLRVTLKLNGDTMQDESTKDMLFGIARLVSYISQTSRLLPGDLVLTGSPAGNGMHWGRL--LRDGDVMEGSITGLG 319          
BLAST of mRNA_P-wetherbeei_contig18392.1.1 vs. uniprot
Match: UPI00047B372D (fumarylacetoacetate hydrolase family protein n=1 Tax=Acidobacterium ailaaui TaxID=1382359 RepID=UPI00047B372D)

HSP 1 Score: 137 bits (346), Expect = 4.420e-35
Identity = 76/232 (32.76%), Postives = 131/232 (56.47%), Query Frame = 1
Query:  241 IDAVQFSAPVPEPWNIFQTYHNFDRPSRISGKVDPPKAERLLPDMFMASRSSLAGFGETIYREHGGYQFDFELEVTAIIGKPAFRVPAERADEYIAGYAIANDYTMHFSWWTKLREGR-RTNDSIRMKNFPGYTPMSRVIVPRDLVGDPHDLGVKVTVDGVLRQDTRTNAMLWRVPELVEYLSHVMPLKPGDLIITGSPEELPLPPGEKKGLRNGQVVVCEVEKLGRLSNTI 933
            +D V+  AP+P+P  IF    N+ R   +  +++ PK    +P +F+   ++L G GE I       Q D+E+E   +IG+   R+  E   +Y+ GY I ND +         R+ +  T+  +  K+FP + P+   IV +D + DPH L +++++DG L Q + T  +++++P+L+ YLS ++PL PGD+I TG+P  + L    ++ L+ G+ V CEV  LG+L N +
Sbjct:   60 LDEVRLLAPIPDPPRIFCIGLNY-RDHAVESRMEVPK----VPTVFLKLPTALVGHGEAIRLPSISSQPDYEVEFACVIGRDGHRIARENWLDYVFGYTILNDVS--------ARDVQLATSQWVLGKSFPTFAPLGPAIVTKDEIPDPHALDIRLSIDGELLQHSNTQELIFKLPDLIAYLSSIVPLLPGDIISTGTPAGVGLGRTPQRWLKPGETVTCEVAGLGQLVNPV 278          
BLAST of mRNA_P-wetherbeei_contig18392.1.1 vs. uniprot
Match: UPI001CEF183D (fumarylacetoacetate hydrolase family protein n=1 Tax=Kibdelosporangium phytohabitans TaxID=860235 RepID=UPI001CEF183D)

HSP 1 Score: 134 bits (336), Expect = 3.060e-34
Identity = 83/232 (35.78%), Postives = 126/232 (54.31%), Query Frame = 1
Query:  238 PIDAVQFSAPVPEPWNIFQTYHNFDRPSRISGKVDPPKAERLLPDMFMASRSSLAGFGETIYREHGGYQFDFELEVTAIIGKPAFRVPAERADEYIAGYAIANDYTMHFSWWTKLREGRRTNDSIRMKNFPGYTPMSRVIVPRDLVGDPHDLGVKVTVDGVLRQDTRTNAMLWRVPELVEYLSHVMPLKPGDLIITGSPEELPLPPGEKKGLRNGQVVVCEVEKLGRLSNTI 933
            P   V F  P+ +P  I+    N+   +R  G  DPP+A       F+ S +SL G   T++R  G  + D+E+E+  +IG+PA  +    A ++IAGY +AND +        +R      D +R K++ G+TP+   IVPR LV D  DL + +TV+G ++Q + TN M+  V + V  LS + PL+PGD+++TG+P       G    L  G VVV E+  +GRL N I
Sbjct:    4 PDTDVTFLPPLADPPAIYCAGANYHDHAREMG-TDPPQATF----HFLVSPASLTGHRSTVHRPEGCQRLDWEVELAIVIGRPASAIHPAAAADHIAGYTVANDLSAR----DHVRASGLGIDWLRHKSYAGFTPLGPAIVPRRLVPDATDLELTLTVNGQVKQHSNTNQMISGVGDQVAALSRIAPLRPGDVVLTGTPAGTAAAHGHY--LHPGDVVVAEITGIGRLENRI 224          
BLAST of mRNA_P-wetherbeei_contig18392.1.1 vs. uniprot
Match: UPI000FF89384 (fumarylacetoacetate hydrolase family protein n=2 Tax=Streptomyces TaxID=1883 RepID=UPI000FF89384)

HSP 1 Score: 136 bits (343), Expect = 3.560e-34
Identity = 97/281 (34.52%), Postives = 145/281 (51.60%), Query Frame = 1
Query:  136 AAAPQMRDFMPDWDRWHNWLRNLDLDPAKEEGWQPIDAVQFSAPVPEPWNIFQTYHNF--------------DRP-------SRISGKVDPPKAERLLPDMFMASRSSLAGFGETIYREHGGYQFDFELEVTAIIGKPAFRVPAERADEYIAGYAIANDYTMHFSWWTKLREGRRTNDSIRMKNFPGYTPMSRVIVPRDLVGDPHDLGVKVTVDGVLRQDTRTNAMLWRVPELVEYLSHVMPLKPGDLIITGSPEELPLPPGEKKGLRNGQVVVCEVEKLG 915
            +A   +R  +  W+     LR L  D A+E  WQP++ ++  APV EP  IFQ+  N+              D P       + I+  +D   AE L P +F+   +++AG  + +       Q D+ELE+ A+I KPA+RV  E A EY+AGY IAND T   + + +  +   T D +R KN PG+TP+   +VP + + DP DL V + ++G   QD  T  ML+ +  LV Y+S    L PGD ++TGSP    +  G    LR+G V+   +  LG
Sbjct:   44 SAPSDVRAVLERWEDTLPMLRALAGDDARE--WQPLEGLRVHAPV-EPRQIFQSGANYRQHVIDLEVAHRSPDDPRTVEEARAEIAAVMDRRAAEDL-PYVFIGLPTTVAGPYDDVVLPSWAQQPDWELELAAVIAKPAYRVGVEEAMEYVAGYTIANDLTDRATVFRRDMKAIGT-DWLRCKNAPGFTPLGPWLVPAESIADPDDLRVTLKLNGDTMQDESTKDMLFGIARLVSYISQTAQLLPGDCVLTGSPAGNGIHWGRL--LRDGDVMEGSITGLG 317          
BLAST of mRNA_P-wetherbeei_contig18392.1.1 vs. uniprot
Match: A0A1H4SC45_9BACT (2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (Catechol pathway) n=1 Tax=Terriglobus roseus TaxID=392734 RepID=A0A1H4SC45_9BACT)

HSP 1 Score: 135 bits (339), Expect = 3.880e-34
Identity = 82/246 (33.33%), Postives = 133/246 (54.07%), Query Frame = 1
Query:  190 WLRNLDLDPAKEEGWQPIDAVQFSAPVPEPWNIFQTYHNFDRPSRISGKVDPPKAERLLPDMFMASRSSLAGFGETIYREHGGYQFDFELEVTAIIGKPAFRVPAERADEYIAGYAIANDYTMHFSWWTKLREGRRTNDSIRMKNFPGYTPMSRVIVPRDLVGDPHDLGVKVTVDGVLRQDTRTNAMLWRVPELVEYLSHVMPLKPGDLIITGSPEELPLPPGEKKGLRNGQVVVCEVEKLGRLSN 927
            ++ + D  PA E     +  V+  AP+  P  IF    N+   +  S  V      + +P +FM   SS+ G  E +       Q DFE+E+  +IG+P +R+ A   ++++ GY I ND +       +L   + T      K+FP +TPM   IV RD V DPH L +K+T+DG + Q   T  +++RVPEL+ Y+S ++PL+ GD+I TG+P  + L    ++ L+ G+ ++ EVE++G L N
Sbjct:   38 FIESGDTQPALEAQTLALSEVKLLAPIQRPPRIFGVGLNYREHAAESKMV-----VQSVPTVFMKLSSSVIGPEEDVILAPEALQPDFEVELGVVIGRPGYRIAAGDWEDHVFGYTIVNDVSARA---VQLATTQWTLG----KSFPTFTPMGPCIVTRDEVPDPHALDIKLTLDGEVMQSANTRDLIFRVPELIAYISSIVPLEAGDVISTGTPPGVGLGRTPQRWLKPGEQMLLEVERIGTLRN 271          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18392.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0002D2B0145.890e-4033.01fumarylacetoacetate hydrolase family protein n=1 T... [more]
A0A0N7F443_9PSEU1.020e-3734.08FAA_hydrolase domain-containing protein n=1 Tax=Ki... [more]
K4QY12_STRDJ7.820e-3734.38Hydrolase n=1 Tax=Streptomyces davaonensis (strain... [more]
A0A6I1Z6L7_9ACTN1.600e-3634.28FAA_hydrolase domain-containing protein n=3 Tax=St... [more]
UPI001FE201965.770e-3633.12fumarylacetoacetate hydrolase family protein n=1 T... [more]
A0A100JQE0_STRSC1.290e-3533.95Ureidoglycolate lyase n=6 Tax=Streptomyces TaxID=1... [more]
UPI00047B372D4.420e-3532.76fumarylacetoacetate hydrolase family protein n=1 T... [more]
UPI001CEF183D3.060e-3435.78fumarylacetoacetate hydrolase family protein n=1 T... [more]
UPI000FF893843.560e-3434.52fumarylacetoacetate hydrolase family protein n=2 T... [more]
A0A1H4SC45_9BACT3.880e-3433.332-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18392contigP-wetherbeei_contig18392:288..1223 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1382359.JIAL01000001_gene1492
PFAMsFAA_hydrolase
Model size936
Max annot lvl204432|Acidobacteriia
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.24e-36
EggNOG OGsCOG0179@1|root,COG0179@2|Bacteria,3Y4QZ@57723|Acidobacteria,2JP1G@204432|Acidobacteriia
DescriptionFumarylacetoacetate (FAA) hydrolase family
Cds size936
COG categoryQ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186144.5620816-CDS-P-wetherbeei_contig18392:287..12231683186144.5620816-CDS-P-wetherbeei_contig18392:287..1223Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18392 288..1223 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18392.1.1prot_P-wetherbeei_contig18392.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18392 288..1223 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18392.1.1

>prot_P-wetherbeei_contig18392.1.1 ID=prot_P-wetherbeei_contig18392.1.1|Name=mRNA_P-wetherbeei_contig18392.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=312bp
MASGKFETLFGIGTIIDAGNAATAVVVNDQVCRLADIVARHSTPGAAAPQ
MRDFMPDWDRWHNWLRNLDLDPAKEEGWQPIDAVQFSAPVPEPWNIFQTY
HNFDRPSRISGKVDPPKAERLLPDMFMASRSSLAGFGETIYREHGGYQFD
FELEVTAIIGKPAFRVPAERADEYIAGYAIANDYTMHFSWWTKLREGRRT
NDSIRMKNFPGYTPMSRVIVPRDLVGDPHDLGVKVTVDGVLRQDTRTNAM
LWRVPELVEYLSHVMPLKPGDLIITGSPEELPLPPGEKKGLRNGQVVVCE
VEKLGRLSNTIG
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mRNA from alignment at P-wetherbeei_contig18392:288..1223+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18392.1.1 ID=mRNA_P-wetherbeei_contig18392.1.1|Name=mRNA_P-wetherbeei_contig18392.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=936bp|location=Sequence derived from alignment at P-wetherbeei_contig18392:288..1223+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCCAGCGGCAAGTTTGAGACGCTCTTCGGTATCGGCACGATCATTGA CGCAGGCAACGCAGCGACGGCGGTCGTTGTGAACGATCAGGTCTGCCGGC TCGCGGACATCGTCGCCCGGCATTCCACGCCGGGGGCCGCAGCCCCGCAG ATGCGGGATTTCATGCCGGATTGGGATCGCTGGCACAATTGGTTGCGCAA TCTCGATCTCGATCCCGCAAAGGAAGAGGGCTGGCAGCCGATCGATGCAG TACAATTCTCCGCGCCGGTACCCGAGCCTTGGAACATCTTTCAGACCTAC CACAATTTCGACCGGCCGAGCCGGATCAGCGGTAAGGTCGATCCCCCGAA GGCAGAACGCCTGTTGCCGGATATGTTCATGGCCTCGCGGTCGTCCCTCG CCGGTTTCGGTGAGACGATCTATCGCGAGCACGGCGGCTATCAGTTCGAT TTCGAGTTGGAGGTGACTGCAATCATCGGAAAACCCGCATTCCGGGTTCC CGCGGAACGCGCCGACGAGTACATCGCCGGCTACGCCATCGCCAACGACT ACACGATGCACTTCTCGTGGTGGACGAAGCTGCGCGAGGGACGCCGCACC AACGACAGCATCCGCATGAAAAACTTCCCCGGCTACACCCCGATGAGCCG AGTAATCGTCCCCCGCGACCTCGTGGGCGACCCGCACGATCTCGGCGTCA AAGTCACGGTAGACGGCGTGCTGCGGCAGGACACCCGTACGAATGCGATG CTGTGGCGGGTGCCCGAACTCGTCGAGTACCTCTCCCATGTCATGCCGCT CAAGCCGGGCGACCTGATCATCACGGGATCGCCTGAGGAATTGCCGCTGC CGCCTGGAGAAAAGAAGGGATTGCGGAACGGACAGGTCGTCGTGTGCGAA GTCGAGAAGCTTGGCCGGTTGTCGAACACGATCGGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18392:288..1223+

>mRNA_P-wetherbeei_contig18392.1.1 ID=mRNA_P-wetherbeei_contig18392.1.1|Name=mRNA_P-wetherbeei_contig18392.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=936bp|location=Sequence derived from alignment at P-wetherbeei_contig18392:288..1223+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCCAGCGGCAAGTTTGAGACGCTCTTCGGTATCGGCACGATCATTGA
CGCAGGCAACGCAGCGACGGCGGTCGTTGTGAACGATCAGGTCTGCCGGC
TCGCGGACATCGTCGCCCGGCATTCCACGCCGGGGGCCGCAGCCCCGCAG
ATGCGGGATTTCATGCCGGATTGGGATCGCTGGCACAATTGGTTGCGCAA
TCTCGATCTCGATCCCGCAAAGGAAGAGGGCTGGCAGCCGATCGATGCAG
TACAATTCTCCGCGCCGGTACCCGAGCCTTGGAACATCTTTCAGACCTAC
CACAATTTCGACCGGCCGAGCCGGATCAGCGGTAAGGTCGATCCCCCGAA
GGCAGAACGCCTGTTGCCGGATATGTTCATGGCCTCGCGGTCGTCCCTCG
CCGGTTTCGGTGAGACGATCTATCGCGAGCACGGCGGCTATCAGTTCGAT
TTCGAGTTGGAGGTGACTGCAATCATCGGAAAACCCGCATTCCGGGTTCC
CGCGGAACGCGCCGACGAGTACATCGCCGGCTACGCCATCGCCAACGACT
ACACGATGCACTTCTCGTGGTGGACGAAGCTGCGCGAGGGACGCCGCACC
AACGACAGCATCCGCATGAAAAACTTCCCCGGCTACACCCCGATGAGCCG
AGTAATCGTCCCCCGCGACCTCGTGGGCGACCCGCACGATCTCGGCGTCA
AAGTCACGGTAGACGGCGTGCTGCGGCAGGACACCCGTACGAATGCGATG
CTGTGGCGGGTGCCCGAACTCGTCGAGTACCTCTCCCATGTCATGCCGCT
CAAGCCGGGCGACCTGATCATCACGGGATCGCCTGAGGAATTGCCGCTGC
CGCCTGGAGAAAAGAAGGGATTGCGGAACGGACAGGTCGTCGTGTGCGAA
GTCGAGAAGCTTGGCCGGTTGTCGAACACGATCGGC
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