mRNA_P-wetherbeei_contig18382.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18382.1.1
Unique NamemRNA_P-wetherbeei_contig18382.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18382.1.1 vs. uniprot
Match: A0A7X8XXP9_9BURK (Uncharacterized protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XXP9_9BURK)

HSP 1 Score: 282 bits (722), Expect = 3.870e-92
Identity = 146/267 (54.68%), Postives = 187/267 (70.04%), Query Frame = 1
Query:    7 ERLSRLDRRWIYLLVALSVMVPLIFPLRLPIKTTQPTRGVYEAINALPGGSVMLFSFDYGPGTKVELHPMAVAAMHLAFRHDVKIVAIALDPAGQAMANEAFHEVAPIYKKEEGKDYVNLGYKAGNEAVLVSRGLNFRSTFPYDPQNK--SQNPLMARVSKLDDFALVGSWSAGSPGALEHIRLTQGAYGRPLVVGVTAVQTPEFFPYYRAGQIKGLLGGLRGAAELEVLAGVPGTATPGMDAQSSTHFMLAFLIILSNVAYWTQRR 801
             RL  LDRRWI+L+V L+V+VPL+ PLRLPI+ + PTRGVY AI ALP G+++  SFDYGPGTKVE HPMA+AA+  AFR D+K+VAIAL P G   A EA  +V     + EG DYVNLGYK+G E VL     +FR+ +  D   +   + PLM RV     F LV  WS G+PG L+++R+    YGRPLV GVTAV  PE +P+  +GQ++GLL GLRGAAE EV+ G PGTAT GMDAQS  HF++A  I+++N+ Y+ +RR
Sbjct:    3 RRLVDLDRRWIFLIVGLAVVVPLLCPLRLPIEPSAPTRGVYAAIEALPPGALVCMSFDYGPGTKVECHPMALAALRHAFRKDLKVVAIALWPEGALFAREALRQVGAEMDRVEGVDYVNLGYKSGGEVVLRGIADDFRNIYSTDLSGRRVDELPLMNRVRGWKSFDLVCDWSMGNPGFLQYVRVVATQYGRPLVAGVTAVTAPEAYPFLDSGQVQGLLSGLRGAAEYEVMVGHPGTATRGMDAQSVVHFVIAGFIVVANLLYFAERR 269          
BLAST of mRNA_P-wetherbeei_contig18382.1.1 vs. uniprot
Match: A0A7Z9U9B6_9BACT (Uncharacterized protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9U9B6_9BACT)

HSP 1 Score: 281 bits (718), Expect = 1.510e-91
Identity = 145/263 (55.13%), Postives = 187/263 (71.10%), Query Frame = 1
Query:    1 WGERLSRLDRRWIYLLVALSVMVPLIFPLRLPIKTTQPTRGVYEAINALPGGSVMLFSFDYGPGTKVELHPMAVAAMHLAFRHDVKIVAIALDPAGQAMANEAFHEVAPIYK-KEEGKDYVNLGYKAGNEAVLVSRGLNFRSTFPYDPQNK--SQNPLMARVSKLDDFALVGSWSAGSPGALEHIRLTQGAYGRPLVVGVTAVQTPEFFPYYRAGQIKGLLGGLRGAAELEVLAGVPGTATPGMDAQSSTHFMLAFLIILSNV 780
            W ++L  LDRR+IYL+V LSV++PL+ P+ LPIK T      ++A   LP G+++L S DYGP T VEL PMA+AA      H  K+  +AL P GQA+ N     +  ++K KEEG DYVNLGYKAGNEAV +  GL+FRS FP D + K  S+ P++  V++L  FALV ++SAG PGALEHIR+T   YG PLVVG TAVQTP++FPY+ +GQ+ G++GGLRGAAE E LAG  GTAT GM+AQS  HF +A LIIL+N+
Sbjct:    3 WVDKLIHLDRRYIYLIVLLSVVLPLMNPMGLPIKVTPSVEASFKAYEDLPKGALVLMSIDYGPSTAVELEPMALAACDQVMNHGQKVAFMALYPEGQALTNRLISRIKELHKDKEEGVDYVNLGYKAGNEAVPLKMGLDFRSQFPTDTRGKPLSEIPMLRDVTQLKQFALVATYSAGFPGALEHIRITASEYGMPLVVGTTAVQTPQYFPYFDSGQVVGIIGGLRGAAEYEKLAGFKGTATGGMEAQSIAHFTVAGLIILANI 265          
BLAST of mRNA_P-wetherbeei_contig18382.1.1 vs. uniprot
Match: A0A1F4YKF9_9BACT (Uncharacterized protein n=1 Tax=candidate division Zixibacteria bacterium RBG_16_48_11 TaxID=1802785 RepID=A0A1F4YKF9_9BACT)

HSP 1 Score: 239 bits (610), Expect = 3.510e-75
Identity = 122/266 (45.86%), Postives = 169/266 (63.53%), Query Frame = 1
Query:    7 ERLSRLDRRWIYLLVALSVMVPLIFPLRLPIKTTQPTRGVYEAINALPGGSVMLFSFDYGPGTKVELHPMAVAAMHLAFRHDVKIVAIALDPAGQAMANEAFHEVAPIYKKEEGKDYVNLGYKAGNEAVLVSRGLNFRSTFP--YDPQNKSQNPLMARVSKLDDFALVGSWSAGSPGALEHIRLTQGAYGRPLVVGVTAVQTPEFFPYYRAGQIKGLLGGLRGAAELEVLAGVPGTATPGMDAQSSTHFMLAFLIILSNVAYWTQR 798
            E ++ LDRRWI+L + L+V +PL FPL +    + P +G Y+ I  +P GS +L S DY PG+  EL+PM VAA+   FR D+K++   L PAG  +   A + +A  YKKE+G D+VNLG+K G E V+VS G +  +TFP  Y+    +Q  +M  V+   D A++ + SAG PG  E ++  Q  Y   LV G TAV  PEF+PYY+ GQ+KGLLGG++GAAE E L GV G  T GMDAQS +H  + F I++ N+AY+  R
Sbjct:    6 EFINNLDRRWIFLFIGLAVSLPLFFPLGIDFTVSHPVQGFYDTIEKVPNGSKILMSCDYDPGSLPELYPMTVAALEQMFRKDLKVIVTCLWPAGPPVVERALNHMAFEYKKEKGIDFVNLGFKEGREVVMVSMGASIPNTFPTDYNGTPVTQIQIMQGVTNFKDLAMIVNISAGYPGTKEWVQQVQARYNIDLVSGCTAVSAPEFYPYYQTGQLKGLLGGMKGAAEYEKLVGVMGLGTRGMDAQSVSHLTVFFFILIGNLAYFVLR 271          
BLAST of mRNA_P-wetherbeei_contig18382.1.1 vs. uniprot
Match: A0A7C5B5Y6_9BACT (Uncharacterized protein n=2 Tax=unclassified candidate division Zixibacteria TaxID=2751484 RepID=A0A7C5B5Y6_9BACT)

HSP 1 Score: 238 bits (608), Expect = 7.050e-75
Identity = 121/266 (45.49%), Postives = 166/266 (62.41%), Query Frame = 1
Query:    7 ERLSRLDRRWIYLLVALSVMVPLIFPLRLPIKTTQPTRGVYEAINALPGGSVMLFSFDYGPGTKVELHPMAVAAMHLAFRHDVKIVAIALDPAGQAMANEAFHEVAPIYKKEEGKDYVNLGYKAGNEAVLVSRGLNFRSTFPYDPQNK--SQNPLMARVSKLDDFALVGSWSAGSPGALEHIRLTQGAYGRPLVVGVTAVQTPEFFPYYRAGQIKGLLGGLRGAAELEVLAGVPGTATPGMDAQSSTHFMLAFLIILSNVAYWTQR 798
            E ++ LDRR+I+L + L+V +PL FP+ +    T P +G Y  I  +P GS +L S DY PG+  EL+PM ++A+   F+ D+K+V   L PAG  +  +A   V P Y K+ G DYVNLG+K G E V+VS G +  +TFP D Q K  SQ P+M  V+   D A++ + SAG PG  E ++  Q  Y   LV G TAV  PEF+PYY+ GQ+KGLLGG++GAAE E L G  G  T GMDAQS +H  +   I++ N+AY+  R
Sbjct:    6 ETINSLDRRYIFLFIGLAVSLPLFFPIGIKFTVTHPVQGFYNTIEKVPNGSKILMSCDYDPGSAPELYPMTISALEQMFKKDLKVVITCLWPAGPPLVEKALAHVTPQYHKQPGIDYVNLGFKEGREVVMVSMGASIPNTFPTDYQGKPVSQIPIMQGVTNFKDVAMIVNISAGYPGTKEWVQQVQSRYQIDLVAGCTAVSAPEFYPYYQTGQLKGLLGGMKGAAEYEKLVGFKGLGTRGMDAQSISHLTVFLFILIGNLAYFALR 271          
BLAST of mRNA_P-wetherbeei_contig18382.1.1 vs. uniprot
Match: A0A355TQU2_9BACT (Uncharacterized protein (Fragment) n=1 Tax=bacterium UBP9_UBA11836 TaxID=2060920 RepID=A0A355TQU2_9BACT)

HSP 1 Score: 232 bits (592), Expect = 4.850e-73
Identity = 121/227 (53.30%), Postives = 148/227 (65.20%), Query Frame = 1
Query:  127 YEAINALPGGSVMLFSFDYGPGTKVELHPMAVAAMHLAFRHDVKIVAIALDPAGQAMANEAFHEVAPIYKKEEGKDYVNLGYKAGNEAVLVSRGLNFRSTFPYDPQNKSQN--PLMARVSKLDDFALVGSWSAGSPGALEHIRLTQGAYGRPLVVGVTAVQTPEFFPYYRAGQIKGLLGGLRGAAELEVLAGVPG-TATPGMDAQSSTHFMLAFLIILSNVAYWTQR 798
            Y  +  LP GS +  SFDYGPGTKVE HPMAVA +H  FR   K+V IAL P G   A EA  +VAP YK ++G DYVNLGYK G E VL + G +F S FP D   +     P+M  V   + FALV  WS G PG  E +R+  G Y RPL+ G TAV TPE +P+  +GQ+ GLLGGLRGA+E EVL G+ G  AT G+DAQS  HF +AFLIIL+N+ Y+ +R
Sbjct:    1 YNTVEQLPKGSYVCLSFDYGPGTKVECHPMAVAMLHHLFRRQCKVVCIALWPEGSLFAREALQQVAPQYKAQDGVDYVNLGYKNGGEVVLRAMGESFSSMFPADLAGRLTESLPIMQEVKGWESFALVCDWSMGRPGLAEFVRVVVGQYHRPLLSGTTAVTTPEAYPFLNSGQVIGLLGGLRGASEYEVLIGLKGGQATRGIDAQSIAHFFVAFLIILANIIYFAER 227          
BLAST of mRNA_P-wetherbeei_contig18382.1.1 vs. uniprot
Match: A0A1F4XC64_9BACT (Uncharacterized protein n=1 Tax=candidate division Zixibacteria bacterium RBG_16_40_9 TaxID=1802783 RepID=A0A1F4XC64_9BACT)

HSP 1 Score: 231 bits (588), Expect = 6.750e-72
Identity = 118/268 (44.03%), Postives = 175/268 (65.30%), Query Frame = 1
Query:    7 ERLSRLDRRWIYLLVALSVMVPLIFPLRLPIKTTQPTRGVYEAINALPGGSVMLFSFDYGPGTKVELHPMAVAAMHLAFRHDVKIVAIALDPAGQAMANEAFHEVAPI-YKKEEGKDYVNLGYKAGNEAVLVSRGLNFRSTFPYDPQNK--SQNPLMARVSKLDDFALVGSWSAGSPGALEHIRLTQGAYGRPLVVGVTAVQTPEFFPYYRAGQIKGLLGGLRGAAELEVLAGVPGTATPGMDAQSSTHFMLAFLIILSNVAYWTQRR 801
            E +++LDRR I++ VAL++++PL+ PL +    T+P +G Y+AI  +P GS +LFS DY PG++ EL PM VAA+    R ++K++A++L PAG  +  EA  +VA   +K + G DYVNLG+K G E V+VS G +  +TFP D +    S+ P+M  VS   D  L+ + S G PG  E ++  Q  Y   LV G TAV  PE++PYY++GQ++GLLGG++GAAE E+L G  G    GMDAQS  H ++   I+L N+AY++ ++
Sbjct:    6 EFINKLDRRVIFIFVALAIIIPLLRPLNIKFTVTEPVQGFYDAIEKVPQGSKVLFSCDYEPGSRPELFPMTVAALEQMLRRNLKVIALSLWPAGPPIVEEALSDVAEKQFKSKYGVDYVNLGFKEGREVVMVSMGSSIPTTFPQDFRGTKVSEIPIMQGVSNFSDVKLIVNISGGYPGTKEWVQQVQARYNIGLVSGCTAVSAPEYYPYYQSGQLRGLLGGMKGAAEYEMLVGRTGLGRKGMDAQSMAHLIIFLFIVLGNLAYFSLKK 273          
BLAST of mRNA_P-wetherbeei_contig18382.1.1 vs. uniprot
Match: A0A1F4YC50_9BACT (Uncharacterized protein n=1 Tax=candidate division Zixibacteria bacterium RBG_16_48_11 TaxID=1802785 RepID=A0A1F4YC50_9BACT)

HSP 1 Score: 229 bits (584), Expect = 2.980e-71
Identity = 114/264 (43.18%), Postives = 165/264 (62.50%), Query Frame = 1
Query:    7 ERLSRLDRRWIYLLVALSVMVPLIFPLRLPIKTTQPTRGVYEAINALPGGSVMLFSFDYGPGTKVELHPMAVAAMHLAFRHDVKIVAIALDPAGQAMANEAFHEVAPIYKKEEGKDYVNLGYKAGNEAVLVSRGLNFRSTFPYDPQNK--SQNPLMARVSKLDDFALVGSWSAGSPGALEHIRLTQGAYGRPLVVGVTAVQTPEFFPYYRAGQIKGLLGGLRGAAELEVLAGVPGTATPGMDAQSSTHFMLAFLIILSNVAYWT 792
            E ++ LDRRWI++ + L+V +PL FP+ +    + P +G Y+ I  +P GS +L S D+ PG+  EL+PM + A+   FR D+K++   L PAG  +   A   V   Y K++G DYV+LG+K G E V+VS G +  +TFP D      S+ P+M  V+   + A++ + SAG PG  E ++  Q  Y   LV G TAV  PEF+PYY+ GQ+KGL+GG++GAAE E L GV G  T GMDAQS +H M+   I++ N+AY+T
Sbjct:    6 EIINTLDRRWIFVFIGLAVSLPLFFPIGIKFSVSHPVQGFYDTIEKIPDGSKILMSCDFDPGSMPELYPMTITALEQMFRKDLKVIITCLWPAGPPLVERALAHVGAEYNKQKGIDYVHLGFKEGKEVVMVSMGASIPNTFPTDYHGTPVSEIPIMQGVTNYREVAMIVNISAGYPGTKEWVQQVQSRYQIGLVAGCTAVSAPEFYPYYQTGQLKGLMGGMKGAAEYEKLVGVMGLGTRGMDAQSVSHLMVFAFILIGNLAYFT 269          
BLAST of mRNA_P-wetherbeei_contig18382.1.1 vs. uniprot
Match: A0A5D0MH90_9BACT (Uncharacterized protein n=1 Tax=Candidatus Mcinerneyibacterium aminivorans TaxID=2703815 RepID=A0A5D0MH90_9BACT)

HSP 1 Score: 226 bits (577), Expect = 3.400e-70
Identity = 118/267 (44.19%), Postives = 165/267 (61.80%), Query Frame = 1
Query:    7 ERLSRLDRRWIYLLVALSVMVPLIFPLRLPIKTTQPTRGVYEAINALPGGSVMLFSFDYGPGTKVELHPMAVAAMHLAFRHDVKIVAIALDPAGQAMANEAFHEVAPIYKKEEGKDYVNLGYKAGNEAVLVSRGLNFRSTFPYDPQNKSQN--PLMARVSKLDDFALVGSWSAGSPGALEHIRLTQGAYGRPLVVGVTAVQTPEFFPYYRAGQIKGLLGGLRGAAELEVLAGVPGTATPGMDAQSSTHFMLAFLIILSNVAYWTQRR 801
            E+++ LDRR IYL++ L+V +PL+F + +  K TQP   +Y+ IN+L    V+L SFDY   +  EL PMA A +   FR+D+K+V +AL P G  +      + A  Y KE GKDYVNLGYK+G   V+ S G + + TFP D    +    P+M  V+KLDDF+L  + SAG PG    + +    +G P+  G TAV  P+FF YY +GQ+ GL+GGLRGAAE E L  VPGTA+ GM AQ+  H M+   II+ N++ +  +R
Sbjct:    5 EKVNDLDRRIIYLIIGLTVFIPLLFNVTMESKPTQPVENIYDKINSLEEDDVVLVSFDYAASSLPELQPMANAVIDHLFRNDIKVVGMALWPVGVGLGTLVMEKKAAKYDKEYGKDYVNLGYKSGGLVVIDSMGGSVKKTFPTDKDGVALKDLPIMKHVNKLDDFSLAVTLSAGDPGLRHWVMVASDKFGLPVAGGCTAVSAPQFFAYYNSGQLLGLMGGLRGAAEYENLIDVPGTASAGMSAQTVAHLMIIIFIIIGNISMFIIKR 271          
BLAST of mRNA_P-wetherbeei_contig18382.1.1 vs. uniprot
Match: T0LDX0_9BACT (Uncharacterized protein n=1 Tax=candidate division Zixibacteria bacterium RBG-1 TaxID=1379698 RepID=T0LDX0_9BACT)

HSP 1 Score: 224 bits (571), Expect = 2.490e-69
Identity = 116/268 (43.28%), Postives = 175/268 (65.30%), Query Frame = 1
Query:    7 ERLSRLDRRWIYLLVALSVMVPLIFPLRLPIKTTQPTRGVYEAINALPGGSVMLFSFDYGPGTKVELHPMAVAAMHLAFRHDVKIVAIALDPAGQAMANEAFHEVAPI-YKKEEGKDYVNLGYKAGNEAVLVSRGLNFRSTFPYDPQNK--SQNPLMARVSKLDDFALVGSWSAGSPGALEHIRLTQGAYGRPLVVGVTAVQTPEFFPYYRAGQIKGLLGGLRGAAELEVLAGVPGTATPGMDAQSSTHFMLAFLIILSNVAYWTQRR 801
            E +++LDRR I++ VAL++++PL+FPL +    T+P RG YEAI+ +P GS +LF+ D+ PG+  EL+PM  AA+    + D+KI+A++L PAG  +  +A  ++A   +K++ G DYVNLG+K G E V+VS G +  +TFP D +    SQ P+M  V+   D  L+ + SAG PG  E ++  Q  Y   LV G TAV  PE++PYY++ Q+ GLLGG++GAAE E+L    G    GMDAQS  H ++   I+L N+AY++ ++
Sbjct:    6 EFINQLDRRIIFIFVALAIILPLLFPLNIKFTVTEPVRGFYEAIDKVPNGSKVLFACDFEPGSLPELYPMTYAALEQMLKKDLKIIALSLWPAGPPLVEKALTDMAQNEFKRKYGVDYVNLGFKEGREVVMVSMGSSIPNTFPQDYRGTKVSQIPIMQGVNNFKDVKLIVNISAGYPGTKEWVQQVQARYNIGLVSGCTAVSAPEYYPYYQSKQLLGLLGGMKGAAEYEILVNRIGLGRRGMDAQSMAHVIIFLFILLGNLAYFSLKK 273          
BLAST of mRNA_P-wetherbeei_contig18382.1.1 vs. uniprot
Match: A0A3M1JVV3_9BACT (Uncharacterized protein n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A3M1JVV3_9BACT)

HSP 1 Score: 224 bits (570), Expect = 4.120e-69
Identity = 116/269 (43.12%), Postives = 166/269 (61.71%), Query Frame = 1
Query:   10 RLSRLDRRWIYLLVALSVMVPLIFPLRLPIKTTQPTRGVYEAINALPGGSVMLFSFDYGPGTKVELHPMAVAAMHLAFRHDVKIVAIALDPAGQAMANEAFHEVAPI-YKKEEGKDYVNLGYKAGNEAVLVSRGLNFRSTFPYDPQNK--SQNPLMARVSKLDDFALVGSWSAGSPGALEHIRLTQGAYGRPLVVGVTAVQTPEFFPYYRAGQIKGLLGGLRGAAELEVLAGVPGTATPGMDAQSSTHFMLAFLIILSNVAYWTQRRNA 807
            RL +LDRRWI+L++A+ V +PL FPL LPI+ T  T+  Y+A++ALP GS +L SF+YGP TK E+HPMA+A +   F   +K+    L P GQ MA EA ++VA   +  + G+DYV LG++ GNEAV+     N R  +  D +       P+M  V++  DF  + S SAG PG +E ++      G P+  G T++Q  E  PY ++GQ+KG+L G+ GAAE E L   PG  T GMDAQS  H ++   IIL N+ ++ +R+ A
Sbjct:   10 RLGKLDRRWIFLIIAIVVALPLFFPLGLPIRPTNATQVAYDAMDALPAGSKVLVSFEYGPSTKPEIHPMAIAVLRHLFSKQIKVYVTCLWPDGQFMAEEALNQVAENEFHLKYGEDYVLLGFRPGNEAVVKGVVSNIRKMYTVDARGTLIDDIPMMKGVNQFSDFDFLFSASAGYPGTVEWVQYASDPTGVPMSTGTTSIQVNEVMPYVQSGQVKGILAGMPGAAEYEALIHQPGIGTSGMDAQSIAHLVIVLFIILGNIGFYIERKRA 278          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18382.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X8XXP9_9BURK3.870e-9254.68Uncharacterized protein n=1 Tax=Burkholderiales ba... [more]
A0A7Z9U9B6_9BACT1.510e-9155.13Uncharacterized protein n=1 Tax=Phycisphaerales ba... [more]
A0A1F4YKF9_9BACT3.510e-7545.86Uncharacterized protein n=1 Tax=candidate division... [more]
A0A7C5B5Y6_9BACT7.050e-7545.49Uncharacterized protein n=2 Tax=unclassified candi... [more]
A0A355TQU2_9BACT4.850e-7353.30Uncharacterized protein (Fragment) n=1 Tax=bacteri... [more]
A0A1F4XC64_9BACT6.750e-7244.03Uncharacterized protein n=1 Tax=candidate division... [more]
A0A1F4YC50_9BACT2.980e-7143.18Uncharacterized protein n=1 Tax=candidate division... [more]
A0A5D0MH90_9BACT3.400e-7044.19Uncharacterized protein n=1 Tax=Candidatus Mcinern... [more]
T0LDX0_9BACT2.490e-6943.28Uncharacterized protein n=1 Tax=candidate division... [more]
A0A3M1JVV3_9BACT4.120e-6943.12Uncharacterized protein n=1 Tax=Candidatus Marinim... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18382contigP-wetherbeei_contig18382:207..1019 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1379698.RBG1_1C00001G0113
Model size813
Max annot lvl2|Bacteria
Hectar predicted targeting categorysignal anchor
Exons1
Evalue4.08e-70
EggNOG OGs28MYQ@1|root,2ZB5K@2|Bacteria,2NPC8@2323|unclassified Bacteria
DescriptionEvidence 5 No homology to any previously reported sequences
Cds size813
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186144.2369716-CDS-P-wetherbeei_contig18382:206..10191683186144.2369716-CDS-P-wetherbeei_contig18382:206..1019Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18382 207..1019 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18382.1.1prot_P-wetherbeei_contig18382.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18382 207..1019 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18382.1.1

>prot_P-wetherbeei_contig18382.1.1 ID=prot_P-wetherbeei_contig18382.1.1|Name=mRNA_P-wetherbeei_contig18382.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=271bp
WGERLSRLDRRWIYLLVALSVMVPLIFPLRLPIKTTQPTRGVYEAINALP
GGSVMLFSFDYGPGTKVELHPMAVAAMHLAFRHDVKIVAIALDPAGQAMA
NEAFHEVAPIYKKEEGKDYVNLGYKAGNEAVLVSRGLNFRSTFPYDPQNK
SQNPLMARVSKLDDFALVGSWSAGSPGALEHIRLTQGAYGRPLVVGVTAV
QTPEFFPYYRAGQIKGLLGGLRGAAELEVLAGVPGTATPGMDAQSSTHFM
LAFLIILSNVAYWTQRRNAN*
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mRNA from alignment at P-wetherbeei_contig18382:207..1019-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18382.1.1 ID=mRNA_P-wetherbeei_contig18382.1.1|Name=mRNA_P-wetherbeei_contig18382.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=813bp|location=Sequence derived from alignment at P-wetherbeei_contig18382:207..1019- (Phaeothamnion wetherbeei SAG_119_79)
TGGGGCGAACGGTTGAGCCGGCTCGACCGCCGCTGGATTTATCTGCTGGT GGCTCTCTCGGTCATGGTTCCTTTGATTTTCCCCTTGCGTCTGCCCATCA AGACCACCCAGCCGACCCGGGGGGTCTACGAGGCTATCAATGCTCTCCCC GGCGGCTCGGTCATGCTGTTTTCCTTCGACTACGGTCCAGGAACCAAAGT CGAGCTCCATCCCATGGCGGTCGCCGCGATGCATCTAGCTTTCCGTCACG ATGTCAAAATCGTGGCCATCGCTCTCGATCCCGCCGGGCAGGCTATGGCC AATGAAGCGTTCCACGAAGTCGCCCCGATCTACAAAAAGGAAGAGGGCAA AGACTACGTCAATCTAGGCTACAAGGCCGGTAACGAAGCCGTTCTGGTAT CGCGGGGACTCAACTTCCGCTCCACCTTCCCCTACGATCCGCAAAACAAA AGCCAGAATCCGCTGATGGCTCGCGTCTCCAAACTCGACGATTTCGCTCT GGTGGGCAGCTGGTCGGCCGGCAGCCCGGGCGCCCTGGAGCATATCCGGC TGACCCAGGGAGCCTATGGACGACCTCTGGTAGTCGGCGTGACGGCGGTT CAGACGCCCGAGTTCTTCCCCTATTATCGCGCGGGCCAAATCAAAGGGCT GCTCGGAGGCCTCCGAGGCGCTGCCGAGCTCGAAGTTCTGGCGGGAGTTC CGGGAACCGCGACGCCCGGCATGGATGCACAATCCTCGACGCACTTTATG CTGGCCTTCCTGATTATCTTGTCCAATGTGGCCTACTGGACGCAAAGGCG GAACGCGAATTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18382:207..1019-

>mRNA_P-wetherbeei_contig18382.1.1 ID=mRNA_P-wetherbeei_contig18382.1.1|Name=mRNA_P-wetherbeei_contig18382.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=813bp|location=Sequence derived from alignment at P-wetherbeei_contig18382:207..1019- (Phaeothamnion wetherbeei SAG_119_79)
TGGGGCGAACGGTTGAGCCGGCTCGACCGCCGCTGGATTTATCTGCTGGT
GGCTCTCTCGGTCATGGTTCCTTTGATTTTCCCCTTGCGTCTGCCCATCA
AGACCACCCAGCCGACCCGGGGGGTCTACGAGGCTATCAATGCTCTCCCC
GGCGGCTCGGTCATGCTGTTTTCCTTCGACTACGGTCCAGGAACCAAAGT
CGAGCTCCATCCCATGGCGGTCGCCGCGATGCATCTAGCTTTCCGTCACG
ATGTCAAAATCGTGGCCATCGCTCTCGATCCCGCCGGGCAGGCTATGGCC
AATGAAGCGTTCCACGAAGTCGCCCCGATCTACAAAAAGGAAGAGGGCAA
AGACTACGTCAATCTAGGCTACAAGGCCGGTAACGAAGCCGTTCTGGTAT
CGCGGGGACTCAACTTCCGCTCCACCTTCCCCTACGATCCGCAAAACAAA
AGCCAGAATCCGCTGATGGCTCGCGTCTCCAAACTCGACGATTTCGCTCT
GGTGGGCAGCTGGTCGGCCGGCAGCCCGGGCGCCCTGGAGCATATCCGGC
TGACCCAGGGAGCCTATGGACGACCTCTGGTAGTCGGCGTGACGGCGGTT
CAGACGCCCGAGTTCTTCCCCTATTATCGCGCGGGCCAAATCAAAGGGCT
GCTCGGAGGCCTCCGAGGCGCTGCCGAGCTCGAAGTTCTGGCGGGAGTTC
CGGGAACCGCGACGCCCGGCATGGATGCACAATCCTCGACGCACTTTATG
CTGGCCTTCCTGATTATCTTGTCCAATGTGGCCTACTGGACGCAAAGGCG
GAACGCGAATTGA
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