mRNA_P-wetherbeei_contig1838.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1838.1.2
Unique NamemRNA_P-wetherbeei_contig1838.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1838.1.2 vs. uniprot
Match: A0A835YZ42_9STRA (Aspartyl/Asparaginyl beta-hydroxylase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ42_9STRA)

HSP 1 Score: 322 bits (825), Expect = 9.310e-99
Identity = 148/252 (58.73%), Postives = 187/252 (74.21%), Query Frame = 1
Query:    7 SLGEAIELAITRKYGDADVSRVLESWRRLRVGEAFEMDWKEKGLQQCGSYIEGLTADPWHDT---EAYSWALGLEENWKTIAIELSNAMKKKNLAQRGNNVWAAAAREEAMAYGPDWRTLVLQDRTWDAANSAIFKKTTKIIKDLGVPSCEVFFARQEPRTGIKPHTDNCNFILTAHLGLDVPEGECWIRVGNERRDWRNGRTMVFDTSFEHETDNATDLPRTVLLIRFWHPEVTAVERDALSFIFAALEDP 753
            SLG+ IE A+  ++G   V RV++ + + R GEAFEM W +KGLQQ  SY+EGL A+PWHD      Y WA  LE+    IA EL   M KK + ++G N+W+ AAR++A+AYGPDWRTLVLQDR WD  N  +F KT  I+++ G+PSCEVFFA+Q PRTGIKPHTD+ NFILTAHLGLDVPEGEC + VG+E R+WRN + ++FDTSF H T N +D PRTVLL+RF+HPEVTA ER AL FIF  +++P
Sbjct:   49 SLGDKIERALVIRFGKDKVQRVVDCFNKSRKGEAFEMQWPDKGLQQASSYMEGLFAEPWHDAADGNMYPWAAKLEQQAGVIASELKAVMAKKGVEKQGTNIWSVAARDDALAYGPDWRTLVLQDRVWDPVNMQLFPKTAAIVQECGIPSCEVFFAKQAPRTGIKPHTDDTNFILTAHLGLDVPEGECRMTVGDETREWRNNKMLIFDTSFVHSTANDSDRPRTVLLMRFFHPEVTADERRALQFIFEVVDNP 300          
BLAST of mRNA_P-wetherbeei_contig1838.1.2 vs. uniprot
Match: W7TMK2_9STRA (Beta-aspartyl asparaginyl family n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMK2_9STRA)

HSP 1 Score: 278 bits (711), Expect = 9.830e-83
Identity = 127/257 (49.42%), Postives = 174/257 (67.70%), Query Frame = 1
Query:    1 EPSLGEAIELAITRKYGDADVSRVLESWRRLRVGEAFEMDWKEKGLQQCG-SYIEGLTADPWHDTEAYSWALGLEENWKTIAIELSNAMKKKNLAQR-GNNVWAAAAREEAMAYGPDWRTLVLQDRTWDAANSAIFKKTTKIIKDLGVPSCEVFFARQEPRTGIKPHTDNCNFILTAHLGLDVPEGECWIRVGNERRDWRNGRTMVFDTSFEHETDNATDLPRTVLLIRFWHPEVTAVERDALSFIFAALEDPEVLT 765
            E ++ + I+  +  +Y   D+ RVL SW R+   + FE    +K  Q+   SYIEGL A PWHD   + W   LEEN   +  EL  A+    + ++ GNNVW  A   E  AYGPDW+TLVLQDR WD  N+ IF KT ++++++G P+ EVFFA+Q+ +TGI+PH+D CNF+LTAHLG+DVPEGECWI+VG ++ +WRNG+ + FDT + HET NA+D  R VLL+RFWHP VT  ER+AL ++F AL+ P+  T
Sbjct:   42 ENAVADRIKDGLLIRYMPEDIHRVLASWNRMVENQPFE----DKEAQRFATSYIEGLEAKPWHDVSKFPWLQKLEENAGVVQQELKEALAMGEMLEKTGNNVWVGALTSEGAAYGPDWKTLVLQDRAWDETNARIFPKTVQLLREIGAPTVEVFFAKQKGKTGIQPHSDGCNFVLTAHLGVDVPEGECWIKVGGQKEEWRNGKALAFDTHYFHETGNASDKDRYVLLMRFWHPGVTPKEREALQYVFDALDGPQAQT 294          
BLAST of mRNA_P-wetherbeei_contig1838.1.2 vs. uniprot
Match: K8ENT2_9CHLO (Asp_Arg_Hydrox domain-containing protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8ENT2_9CHLO)

HSP 1 Score: 279 bits (713), Expect = 1.300e-82
Identity = 131/249 (52.61%), Postives = 178/249 (71.49%), Query Frame = 1
Query:   19 AIELAITRKYGDADVSRVLESWRRLRVGEAFEMDWKEKGLQQCGSYIEGLTADPWHDTEA--YSWALGLEENWKTIAIELSNAMKKKNLAQRGNNVWAAAAREEAMAYGPDWRTLVLQDR-TWDAANSAIFKKTTKIIKDLGVPSCEVFFARQEPRTGIKPHTDNCNFILTAHLGLDVPEGECWIRVGNERRDWRNGRTMVFDTSFEHETDNATD-LPRTVLLIRFWHPEVTAVERDALSFIFAALEDP 753
            ++  AI  +YG  +  RV+ES   L   E +  D    G+Q+  SYI GL A P+HDT++  + W   LE++++ I  EL  A+   ++ ++GN +WA AAREEA+AYGPDWRTLVLQDR  WD  NS++F +TT+++K   VPS EVFFARQ P+TGI+PH+DN NFILT+HLGLDVPEGECW+RVGNE+  W+NG  ++ DTSF H T N ++   R VL+IRFWHP ++  ER+AL+F+F A+EDP
Sbjct:   56 SVSSAIRERYGSVETKRVIESLNFLAADEEYYRDHANFGIQRASSYISGLEARPFHDTDSPDFLWMKKLEKDYEVILGELQGAVTNTDIEKQGNYIWAPAAREEAIAYGPDWRTLVLQDRCVWDVTNSSLFPRTTELVKRFKVPSVEVFFARQSPQTGIEPHSDNTNFILTSHLGLDVPEGECWMRVGNEQHFWKNGSGVIADTSFIHSTKNLSEKTDRYVLIIRFWHPGLSKTERNALTFLFDAIEDP 304          
BLAST of mRNA_P-wetherbeei_contig1838.1.2 vs. uniprot
Match: A0A5J4Z4R2_PORPP (Aspartyl/asparaginyl beta-hydroxylase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z4R2_PORPP)

HSP 1 Score: 280 bits (715), Expect = 2.230e-82
Identity = 135/265 (50.94%), Postives = 177/265 (66.79%), Query Frame = 1
Query:    1 EPSLGEAIELAITRKYGDADVSRVLESWRRLRVGEAFEMDWKEKGL------QQCGSYIEGLTADPWHDTEA--YSWALGLEENWKTIAIELSNAMK-KKNLAQRGNNVWAAAAREEAMAYGPDWRTLVLQDRTWDAANSAIFKKTTKIIKDLGVPSCEVFFARQEPRTGIKPHTDNCNFILTAHLGLDVPEGECWIRVGNERRDWRNGRTMVFDTSFEHETDN--ATDLPRTVLLIRFWHPEVTAVERDALSFIFAALEDPEVL 762
            E +  EA+ + +   + +  ++RVL +W   + G  +E +W   G       Q+CGS+IEGL A P+HD     + W   LE+NW+TI  EL  +     ++ +RG NVW  A ++ A+ YGPDWRTLVLQDR W+  NS +F KTTKI+KD  VPS EVFFARQ P+TGIKPHTDNCNFI+TAHL LD P  + WI+VG E+R W NG+ +VFDTSF H T N  +TD  R VLLIRFWHP++  VER AL FIF A+E+P ++
Sbjct:  106 EDTFFEAVAIVLKEMFDEDKIARVLAAWHLAQKGTVYEKNWDPSGQNGEEFWQRCGSFIEGLDARPFHDPNGGNFPWVHELEQNWETIRDELRRSYSDNSHVVKRGVNVWVPAVKDVALEYGPDWRTLVLQDRVWEPTNSKLFSKTTKIVKDAKVPSVEVFFARQGPQTGIKPHTDNCNFIMTAHLALDAPPNQSWIKVGGEQRFWENGKALVFDTSFTHSTFNESSTDT-RYVLLIRFWHPQLMPVERKALQFIFDAVENPALV 369          
BLAST of mRNA_P-wetherbeei_contig1838.1.2 vs. uniprot
Match: A0A7S1XP57_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XP57_9STRA)

HSP 1 Score: 277 bits (709), Expect = 2.990e-82
Identity = 137/268 (51.12%), Postives = 179/268 (66.79%), Query Frame = 1
Query:   19 AIELAITRKYGDADVSRVLESWRRLRVGEAFEMDWKEKG--LQQCGSYIEGLTADPWHDTEAYSWALGLEENWKTIAIELSNAMKK---KNLAQRGNNVWAAAAREEAMAYGPDWRTLVLQDRTWDAANSAIFKKTTKIIKDLG------VPSCEVFFARQEPRTGIKPHTDNCNFILTAHLGLDVPEGECWIRVGNERRDWRNGRTMVFDTSFEHETDNATDLPRTVLLIRFWHPEVTAVERDALSFIFAALEDPEVLT-PALTPQP 786
            AI+ A+ ++Y    ++RV++S   + +G+   ++ +E G   Q+  SY+EGLTA PW DT  + W   LEEN   IA EL  A+     K L   G N+WA+A  E A+AYGPDW+TLVLQDR WD  N  +F +T +I++ +       VPS E FFARQ P TGIKPHTD  NFILTAHLGLD P G+CWI+VG E+++W NG+T++ DTSF H T+N TD  R VLL+R WHPEVT +ER+ALSF+F A EDP +L  PAL   P
Sbjct:   41 AIQEALFKRYDIDSIARVMDSLDSVSMGKDLAVNHEEHGGARQEAHSYLEGLTAKPWWDTSEFKWCQRLEENADIIAEELRQALSDEGAKKLEAEGTNIWASAVDEGALAYGPDWKTLVLQDREWDPVNCGLFPRTAEILRKITADKSAVVPSVEAFFARQTPGTGIKPHTDFTNFILTAHLGLDTPTGDCWIKVGEEKKNWENGKTILMDTSFIHSTENNTDQDRFVLLLRVWHPEVTKIEREALSFVFRATEDPSLLEKPALKKSP 308          
BLAST of mRNA_P-wetherbeei_contig1838.1.2 vs. uniprot
Match: A0A2E5QEW0_9EURY (Asp_Arg_Hydrox domain-containing protein n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E5QEW0_9EURY)

HSP 1 Score: 273 bits (697), Expect = 1.670e-80
Identity = 131/248 (52.82%), Postives = 173/248 (69.76%), Query Frame = 1
Query:   31 AITRKYGDADVSRVLESWRRLRVGEAFEMDWKEKGLQQCGSYIEGLTADPWHDTEA--YSWALGLEENWKTIAIELSNAMKKKNLAQRGNNVWAAAAREEAMAYGPDWRTLVLQDR-TWDAANSAIFKKTTKIIKDLGVPSCEVFFARQEPRTGIKPHTDNCNFILTAHLGLDVPEGECWIRVGNERRDWRNGRTMVFDTSFEHETDNATDLP-RTVLLIRFWHPEVTAVERDALSFIFAALEDPEVL 762
            A+  +Y + +V RVL+S   +  G+ +      KGLQ+  SYI GL A+P+HD +   Y W   LEEN+  I  EL++A+    L+  G +VW  AAR EA+AYGPDW+TLVLQDR  W+  N A+F KT +++K  GVPS EVFFA+Q P TGIKPHTDN NFILT+HLGLDVPEGECW++VG  +++W+NG  M+ DTSF H T N +++  R VL+IRFWHP++T VER AL F+F A+ DP  L
Sbjct:   50 ALKEQYKEDEVKRVLDSLEFVSTGQEYTRFHPSKGLQKASSYISGLLAEPFHDLDDLNYLWMRKLEENFSDIQGELTSALSNPKLSAVGQHVWVQAARAEAVAYGPDWKTLVLQDRCVWEDTNCALFPKTVELLKKNGVPSVEVFFAKQAPNTGIKPHTDNTNFILTSHLGLDVPEGECWMKVGEFKKEWKNGHGMIADTSFVHSTANESEVKTRYVLIIRFWHPQLTTVERCALQFLFDAIADPSEL 297          
BLAST of mRNA_P-wetherbeei_contig1838.1.2 vs. uniprot
Match: A0A090M790_OSTTA (Aspartyl/Asparaginyl beta-hydroxylase n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090M790_OSTTA)

HSP 1 Score: 271 bits (692), Expect = 8.010e-80
Identity = 135/256 (52.73%), Postives = 173/256 (67.58%), Query Frame = 1
Query:    4 PSLGEAIEL--AITRKYGDADVSRVLESWRRLRVGEAFEMDWKEKGLQQCGSYIEGLTADPWHDTEA--YSWALGLEENWKTIAIELSNAMKKKNLAQRGNNVWAAAAREEAMAYGPDWRTLVLQDR-TWDAANSAIFKKTTKIIKDLGVPSCEVFFARQEPRTGIKPHTDNCNFILTAHLGLDVPEGECWIRVGNERRDWRNGRTMVFDTSFEHETDNATDLP-RTVLLIRFWHPEVTAVERDALSFIFAALEDP 753
            P +G+   +  A+  +YG     RVL+S      G+ +      KGLQ+  SYIEGL+A P+HD     Y W  GLE ++  I  EL +A+    L+  GN +WAAAAREEA+AYGPDW+TLVLQDR  WD  N+++F KT +I+K+  VPS E FFARQ P TGIKPH+D  NFILT+HLGLDVPEG+CW++VG  ++DW NG  M+ DTSF H T N +D   R VL+IRFWHPE+T  ER AL F+F AL+DP
Sbjct:   35 PGVGDVSRIHDAMRARYGKTS-QRVLDSLAFAATGQEYTRFHPGKGLQKASSYIEGLSAKPFHDVSDLDYEWLRGLERDYPVILDELVSALTNPQLSTFGNRIWAAAAREEAVAYGPDWKTLVLQDRCVWDETNASLFPKTVEILKNHNVPSVEAFFARQAPSTGIKPHSDYTNFILTSHLGLDVPEGQCWMKVGEFKKDWVNGGGMIVDTSFVHSTANESDSKTRYVLIIRFWHPELTLAERQALQFLFEALDDP 289          
BLAST of mRNA_P-wetherbeei_contig1838.1.2 vs. uniprot
Match: R7QQ79_CHOCR (Asp_Arg_Hydrox domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQ79_CHOCR)

HSP 1 Score: 259 bits (662), Expect = 4.280e-76
Identity = 129/257 (50.19%), Postives = 172/257 (66.93%), Query Frame = 1
Query:    1 EPSLGEAIELAITRKYGDADVSRVLESWRRLRVGEAFEMDWKEKGLQQCGSYIEGLTADPWHDT--EAYSWALGLEENWKTIAIELSNAMKKKNLAQRGNNVWAAAAREEAMAYGPDWRTLVLQDRTWDAANSAIFKKTTKIIKD--LGVPSCEVFFARQEPRTGIKPHTDNCNFILTAHLGLDVPEGECWIRVGNERRDWRNGRTMVFDTSFEHETDN-ATDLPRTVLLIRFWHPEVTAVERDALSFIFAALEDPE 756
            E SL + I  A+  ++    +SRV++S+R +  G+  E++  E   Q+  S+IEGL A P+ +     Y W   LE NW+TIA EL  AMK+K++ ++GNN+WA    E A AYGPDWRTLVLQDR WD  N  +F KTT I++D    VPS E FFARQ   TGIK HTD+CNFILT HL L  PE + WI V  ERR W NG+ +VF+TSF H+T N + +  R VLLIRFWHP++  +ER+ALSF+F A+++P+
Sbjct:    4 EVSLADTILKALENEFRGKSISRVIQSFRNVVDGKKLEVNEGEITHQRATSFIEGLDATPFIEDFDNDYQWVRHLENNWETIAAELREAMKQKDIQRKGNNIWAPPVVEAANAYGPDWRTLVLQDRVWDPVNINLFPKTTAILQDSEAHVPSVEAFFARQAAGTGIKLHTDDCNFILTMHLALSAPEKQSWIEVAGERRYWENGKGLVFNTSFFHQTMNESNEQDRVVLLIRFWHPQLRPIEREALSFLFQAIDNPD 260          
BLAST of mRNA_P-wetherbeei_contig1838.1.2 vs. uniprot
Match: A0A7S3UYA1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UYA1_HETAK)

HSP 1 Score: 258 bits (658), Expect = 5.020e-75
Identity = 115/254 (45.28%), Postives = 166/254 (65.35%), Query Frame = 1
Query:    7 SLGEAIELAITRKYGDADVSRVLESWRRLRVGEAFEMDWKEKGLQQCGSYIEGLTADPWHDTEAYSWALGLEENWKTIAIELSNAMKKKN-LAQRGNNVWAAAAREEAMAYGPDWRTLVLQDR-TWDAANSAIFKKTTKIIKDLGVPSCEVFFARQEPRTGIKPHTDNCNFILTAHLGLDVPEGECWIRVGNERRDWRNGRTMVFDTSFEHETDNATDLPRTVLLIRFWHPEVTAVERDALSFIFAALEDPEVL 762
            SL   I   + +++G   V +VL+++ R+  G+ +EM W EK  Q   SY+EGLT   + D + + WA+ L++NW+ I  EL N ++    L Q+GNN+W+AA   +A AYG DW+TLVL DR  WD  NS +F +T +++K  GVP CE FFA+Q   TGIKPH+D  NFI+T+HL L  P+ + WI VG +R  W  G+ ++FDTS  H T N  D+ R VL++RFWHP++T  ER A+ FIF  ++DPE++
Sbjct:   42 SLQNRINTVVDKQWGKKKVGKVLDAFNRIAKGDIWEMPWGEKSKQVAHSYMEGLTVKDYWDVDDFQWAIKLQDNWEQIRDELQNHIQAPTELEQKGNNIWSAALTSDAQAYGQDWKTLVLMDRGVWDPTNSGLFPQTVEVLKKCGVPCCEAFFAKQPADTGIKPHSDGTNFIITSHLALMTPKDKAWIEVGGKRAYWEEGKVLIFDTSLLHNTRNDGDIDRYVLMLRFWHPDMTKQERQAMQFIFNCIDDPELV 295          
BLAST of mRNA_P-wetherbeei_contig1838.1.2 vs. uniprot
Match: M1VKP3_CYAM1 (Similar to aspartyl beta-hydroxylase n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VKP3_CYAM1)

HSP 1 Score: 258 bits (658), Expect = 5.680e-75
Identity = 126/251 (50.20%), Postives = 164/251 (65.34%), Query Frame = 1
Query:    7 SLGEAIELAITRKYGDADVSRVLESWRRLRVGEAFEMDWKEKGLQQCGSYIEGLTADPWHDTEAYSWALGLEENWKTIAIELSNAMKK-KNLAQRGNNVWAAAAREEAMAYGPDWRTLVLQDRTWDAANSAIFKKTTKIIKDLGVPSCEVFFARQEPRTGIKPHTDNCNFILTAHLGLDVPEGECWIRVGNERRDWRNGRTMVFDTSFEHETDNAT-DLPRTVLLIRFWHPEVTAVERDALSFIFAALEDP 753
            S  E +E ++ RK+    V+RV+++WR+++ GE    D +E       SYI GL    + D   + WA  LE NW+TI  EL +     + L   G+ VW  AAR EA+AYGPDWRTLVLQDR W   N  +F KTT+II+D GVPS E FFARQ P++GIK H+D CNFILTAHL L  P  + WI VG ERR W +G+ ++FDTS+ HET N + D  R VLL+RFWHPE T VER+AL +IF  +++P
Sbjct:   31 SFAERVERSLRRKFPADSVARVIQAWRQIQRGEMLREDQRE-----AHSYIRGLRTARFFDNAEFPWAAALERNWETIRDELRHXXXXXQELEALGSQVWVTAARAEAVAYGPDWRTLVLQDRRWHDDNCKLFTKTTRIIRDCGVPSVEAFFARQAPQSGIKLHSDGCNFILTAHLALQAPPRQSWIAVGGERRFWEDGKVLIFDTSYLHETYNESQDSDRYVLLLRFWHPETTRVEREALQYIFDVVDNP 276          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1838.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YZ42_9STRA9.310e-9958.73Aspartyl/Asparaginyl beta-hydroxylase-domain-conta... [more]
W7TMK2_9STRA9.830e-8349.42Beta-aspartyl asparaginyl family n=1 Tax=Nannochlo... [more]
K8ENT2_9CHLO1.300e-8252.61Asp_Arg_Hydrox domain-containing protein n=1 Tax=B... [more]
A0A5J4Z4R2_PORPP2.230e-8250.94Aspartyl/asparaginyl beta-hydroxylase n=1 Tax=Porp... [more]
A0A7S1XP57_9STRA2.990e-8251.12Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A2E5QEW0_9EURY1.670e-8052.82Asp_Arg_Hydrox domain-containing protein n=1 Tax=E... [more]
A0A090M790_OSTTA8.010e-8052.73Aspartyl/Asparaginyl beta-hydroxylase n=1 Tax=Ostr... [more]
R7QQ79_CHOCR4.280e-7650.19Asp_Arg_Hydrox domain-containing protein n=1 Tax=C... [more]
A0A7S3UYA1_HETAK5.020e-7545.28Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
M1VKP3_CYAM15.680e-7550.20Similar to aspartyl beta-hydroxylase n=1 Tax=Cyani... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1838contigP-wetherbeei_contig1838:386..4507 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog70448.A0A090M790
PFAMsAsp_Arg_Hydrox
Model size2666
Max annot lvl2759|Eukaryota
KEGG koko:K00476
Hectar predicted targeting categoryother localisation
Exons8
Evalue2.73e-84
EggNOG OGsCOG3555@1|root,KOG3696@2759|Eukaryota
Ec32 ortholog descriptionIsopenicillin N synthase-like
Ec32 orthologEc-24_000830.1
EC1.14.11.16
Descriptionpeptide-aspartate beta-dioxygenase activity
Cds size786
COG categoryO
BRITEko00000,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1838.1.2prot_P-wetherbeei_contig1838.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1838 500..2443 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186144.1295896-UTR-P-wetherbeei_contig1838:385..4991683186144.1295896-UTR-P-wetherbeei_contig1838:385..499Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1838 386..499 +
1683186144.1925585-UTR-P-wetherbeei_contig1838:2443..27771683186144.1925585-UTR-P-wetherbeei_contig1838:2443..2777Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1838 2444..2777 +
1683186144.1999764-UTR-P-wetherbeei_contig1838:2919..34361683186144.1999764-UTR-P-wetherbeei_contig1838:2919..3436Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1838 2920..3436 +
1683186144.207257-UTR-P-wetherbeei_contig1838:3455..38531683186144.207257-UTR-P-wetherbeei_contig1838:3455..3853Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1838 3456..3853 +
1683186144.214607-UTR-P-wetherbeei_contig1838:3990..45071683186144.214607-UTR-P-wetherbeei_contig1838:3990..4507Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1838 3991..4507 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186144.140846-CDS-P-wetherbeei_contig1838:499..6191683186144.140846-CDS-P-wetherbeei_contig1838:499..619Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1838 500..619 +
1683186144.154246-CDS-P-wetherbeei_contig1838:878..10601683186144.154246-CDS-P-wetherbeei_contig1838:878..1060Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1838 879..1060 +
1683186144.1644392-CDS-P-wetherbeei_contig1838:1365..15041683186144.1644392-CDS-P-wetherbeei_contig1838:1365..1504Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1838 1366..1504 +
1683186144.1748312-CDS-P-wetherbeei_contig1838:1807..19481683186144.1748312-CDS-P-wetherbeei_contig1838:1807..1948Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1838 1808..1948 +
1683186144.184387-CDS-P-wetherbeei_contig1838:2239..24431683186144.184387-CDS-P-wetherbeei_contig1838:2239..2443Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1838 2240..2443 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1838.1.2

>prot_P-wetherbeei_contig1838.1.2 ID=prot_P-wetherbeei_contig1838.1.2|Name=mRNA_P-wetherbeei_contig1838.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=262bp
MDWKEKGLQQCGSYIEGLTADPWHDTEAYSWALGLEENWKTIAIELSNAM
KKKNLAQRGNNVWAAAAREEAMAYGPDWRTLVLQDRTWDAANSAIFKKTT
KIIKDLGVPSCEVFFARQEPRTGIKPHTDNCNFILTAHLGLDVPEGECWI
RVGNERRDWRNGRTMVFDTSFEHETDNATDLPRTVLLIRFWHPEVTAVER
DALSFIFAALEDPEVLTPALTPQPFVPDWMAVDAPAGPQPADSRAERRRA
ERERRKQEERD*
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mRNA from alignment at P-wetherbeei_contig1838:386..4507+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1838.1.2 ID=mRNA_P-wetherbeei_contig1838.1.2|Name=mRNA_P-wetherbeei_contig1838.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4122bp|location=Sequence derived from alignment at P-wetherbeei_contig1838:386..4507+ (Phaeothamnion wetherbeei SAG_119_79)
GAGCCATCCCTTGGAGAAGCGATCGAACTGGCTATTACGAGGAAGTATGG AGATGCCGATGTGTCCCGTGTGCTCGAATCGTGGCGTCGCCTGCGGGTAG GGGAGGCTTTTGAGATGGACTGGAAGGAAAAGGGACTGCAACAGTGCGGG TCATACATCGAGGGCTTGACAGCTGACCCGTGGCATGATACCGAGGCTTA TTCTTGGGCCTTGGGTCTCGAAGAGAACTGGAAGGTAACCGGGAAAGAGA ACATTTTCGCTTCCTCTTGAGCCTTTTTCCATGTTACTTCCTGTGTTACT CTTCGAGCCCAGGAGCTCCTGCTGCGTTACCGCACTATCGGCTTAATTCT TCTAACAGTCATGCGTTGTTCAACAAAGAAAGTTCAAGTTTCTACATCTT CCCGACGTCCTTCTTCGCCTAAGAAAAGAGCCTCTGTTTCAGATGAAATG TGCCAGTTCTTTTATCCCCTCCTCTCGCACAAACGAAGAGCAGACCATCG CTATTGAGCTCTCCAACGCCATGAAGAAGAAGAACCTGGCCCAGAGGGGC AACAACGTGTGGGCGGCGGCGGCGCGGGAGGAGGCCATGGCCTACGGGCC CGACTGGCGGACCCTCGTCCTCCAGGACCGCACCTGGGACGCCGCCAACT CCGCTATCTTCAAGAAGACTACCAAGTACGTTTCCTTTCCCCTTCACCGT CCTGTTTCTTTGCAGTCGTTCGGCACTTGCGTCCCCAGTAGCAAGCTGCA TTGGATGGTCAGCGCGATCGGCTGGGTGGCTATCTACCTAAGGACGCCTT CCCTCAAGAAATGGCGGCGCGCGAGTGGACAATGCTGCCATGATTCCAGT TCGTAGCTCTCCGAAGCAAGAGCTCCTGTCATGGATAAACCAGGCAACGC TTGCTGCTTCCGCTACCTCCGCCTGCCCCACAACCAATCTGTTTCGTCCT TTTCTCCACCATCCTCTGCGTCCGCGCCAGGATAATCAAGGACCTCGGAG TGCCGTCCTGCGAGGTGTTCTTCGCTCGGCAGGAGCCGCGGACGGGCATC AAACCCCACACGGATAACTGTAATTTCATCCTGACGGCGCATCTGGGACT TGACGTGCCGGAGGGCGAGGTATGCTTTGAGACTGCGCATTTTTTCCGAA ATGACTGAGGTTTCCGGCTGGGGCAATCCCTGGAACAATTGGCAAGGGTT GAAGGACGGAACTGCCGTGCCTGGAGCTTCGTCTTTGAGTAACATGTTAC GTGCTTCACAACGGCGAGGTAATTTAGAATACGTTGGAATGCGTGTCTGT GCTGTCGCTGCCAGGTTGCTTGCCTGCTATGCTGATGTGCAAATTCACCA TCTCTGCTTTCCACCACGGTCAACTGGTCGGTTTGAACTGGTCTGCTACG CGACGGCGGTGGCGGCACGCAGTGCTGGATCCGGGTGGGGAACGAGCGGC GCGACTGGCGCAACGGTAGAACGATGGTGTTCGACACGAGCTTCGAGCAC GAGACGGACAACGCCACGGACCTGCCGCGGACGGTGCTCCTCATCCGCTT CTGGCACCCTGAGGTGAATTGTGTGGAGGTTGGTTTTGCAATTGGTGGCA GAAACTGAGGACTGTTTCTCGCTGCCGCGCATTCCCTGAAAGGTTCGCCT TGGCTACCGGCCAAGCAATTTCTGTTGGATGCGAATCCCGCGAGGCCTTG CGCAGCTAGTAGCGCTCCAGCGCATTGTGTTCTGTGTCGTTTCGCCAGCC TCGTTCCCCCTGCCAGGCCTAGCGCACACACTCCCAGCACTGCTGCTCTT GCCTTCCATTTGGCCATTTCAGAACGTGTTTGCCCTGTCCTCAGCTGCGT GCAGGTGACGGCGGTGGAGCGAGACGCTCTCAGCTTCATCTTTGCGGCGC TCGAAGACCCCGAGGTCCTGACGCCGGCGCTGACGCCGCAGCCATTCGTC CCCGACTGGATGGCAGTGGACGCTCCGGCGGGGCCCCAGCCGGCGGACAG CCGTGCGGAGCGGCGGCGGGCGGAGCGCGAGCGCAGGAAGCAGGAGGAGC GCGACTGAATGAGGGTTTTTTTAACTTAAAAAAGATCTCTGAGTTTGTCT TCCTATGCCGCTTTTCTGACTTGACCTGCGCGGGTCGCTGCGTGCAGCTC TCTTGGTGAAATGTCTCGAAACCGCCTCCAGTGTGATTCCTCAGTCTAGA CCAGGATGTGCACCGGAAGAGAAGCAATCCACCGCTTCGTCGTCGACGTC CCGGCGCCACTCTGTTCCGAACACCATTCCTCGTTCCACTCTATCGGGCC AATCTTCCCCAAGCCCTTCATGCCATGGCCGCTGCTCGCGAGCAGCGACG GCGGTAGCGGCCGGTAGTGGCTGGCGCGACGGTGATGAATAGGCAAGCGG CGGAGGTGGTGAAAGCAGGCCCGCCTCTTAAAATCACGGCATTCCTACTA AGCTCTTCGTTAGGGTCTCCTGTTCAGGGGGCCAGTGACTCGATCCCTTT GACTTCCCGCTACCAATCCAACCATGATCTGCAGAGATCGATAAGGCGGC AGCAGATAAGGCAGCGGCGCAGCTGTCGGTAGCGGCCCAGCACGGTGCGT GCTTCCAGCAGCGATTGGGGGCTGACAAGGCAGAACCGCGCCGGCGAGGC GCGACCGACTCCACTGTCAACGGCAGTACCGGCGGCGGCATGCGGGGCCA GGAACGACGAGTGGAGTCAGCTGGGTGGAGTGAAGCGGCAGAGCCATCGC TCGGCAGGGGGCGCTGCGGGCCAGTGATAGAAAAGTCATGACAGCAGGGA GCAGGGCCGGCATTGGAGAAGCGTGGTCCCAGCAGCGGTGGATGGAGCCG ACATTGACAGAGCCGCCGGCAGTGCGGAACGAGATAGCGCCGCCGTGTTT ATCATGCGAGGGAAATATGCTATGACCGCTGCTGCGCCGCCACGCTGTGT CCACCGCGGCTCTTCCCCGCCGACTGCCTCAGTTCCTGCCACGATTTTCA GGTTCTTTCCTTCCAACCTCCCCGCTGGCATTTTTGCTGACACGCATTCG CATGTTTCCCATGCCTTCCTGGCCTTGTGCGCGGGCGAGTCTGGAATGCG ACTGCGCCGCCCCCTTTCTCTTGCAGCGTGGGAGGAACCTGACGGCGCCG AAGACAAGCTGCTGGCCAAGCTGCTGGCCAAGTACGGCAGCCAAGTGGTC TCGGCGCGAAGAGCGATGGCGTCATCTCTTACCAAAAAGGTGTTACGGGA CTCCGAGGACAACCGGACCTTCAACATACACCTTCATGGCCATTGTCACC GTCGACGCGGGCGAGGTGACGAGCGTCACGTGGGATGCCACTATTGTCTC GTGGAGATGTGCGATTTACGTACGACGGGCTGCACGCCAACACCACCAAC GGCGAGGACTGCTGGTGGACGAATGACGACTGCACGGGCGTCAACGGCAC ATTTACCAAGATCTGCCGGTGCGTCTGGTTTTCTGTTGTGCGACTGAGTT GTTCTGCTGCTGCGTTATTCGTTTACATATGTTTTGCTGCCGTGCCGTCG CATTTTGTGACCCTGTACGCCCCTTTGCGCCATTCCACTCCCACAACGAT ATCAGGCTCACGGTCTACGTCGTCTGGTCTGGTACGGACAAGAGCGACGA CGCCTTCACCAGCTCCAGCAAGCGCGTATCCGGTCAGTTGCTTCTGGAGG CACGGTTCAGGGCGGCAGAGCGGCTCAGATCTCTCACGGCTTGTGCGCTT TACGTGTTAGTCTAAAGTGCCGGTGTGCTTTTTGGCTGCAAATGCGGTAG GCGGCGGCGACGGTGGAAGCGGCGGCAATGGCACAAAGAGGAGTGAAGCG GTCGTGTGCCCGCCAATTTCGACAAAATGTATGCCCTTGGTTTCGAGTCG TTGCCTACACTTGCTCATTGCCCGCAACACTTCCGCCACTTCCCTTCATT TCCGCAATCGCCTCCCTTCATTTCCGCAATCGCTTCCCTTCATTTCCGCA ATCGCTCTTTCGCACACTACATTGCCGAGCGCCAGCAAACTGTTATCGCG GATAGATGAGCTAATAGCAGTTAGTCACCAGCTGTAGCACGCGCCATTGG ATGACTTTGAAGGTAGCCCGGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1838:386..4507+

>mRNA_P-wetherbeei_contig1838.1.2 ID=mRNA_P-wetherbeei_contig1838.1.2|Name=mRNA_P-wetherbeei_contig1838.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=786bp|location=Sequence derived from alignment at P-wetherbeei_contig1838:386..4507+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGACTGGAAGGAAAAGGGACTGCAACAGTGCGGGTCATACATCGAGGG
CTTGACAGCTGACCCGTGGCATGATACCGAGGCTTATTCTTGGGCCTTGG
GTCTCGAAGAGAACTGGAAGACCATCGCTATTGAGCTCTCCAACGCCATG
AAGAAGAAGAACCTGGCCCAGAGGGGCAACAACGTGTGGGCGGCGGCGGC
GCGGGAGGAGGCCATGGCCTACGGGCCCGACTGGCGGACCCTCGTCCTCC
AGGACCGCACCTGGGACGCCGCCAACTCCGCTATCTTCAAGAAGACTACC
AAGATAATCAAGGACCTCGGAGTGCCGTCCTGCGAGGTGTTCTTCGCTCG
GCAGGAGCCGCGGACGGGCATCAAACCCCACACGGATAACTGTAATTTCA
TCCTGACGGCGCATCTGGGACTTGACGTGCCGGAGGGCGAGTGCTGGATC
CGGGTGGGGAACGAGCGGCGCGACTGGCGCAACGGTAGAACGATGGTGTT
CGACACGAGCTTCGAGCACGAGACGGACAACGCCACGGACCTGCCGCGGA
CGGTGCTCCTCATCCGCTTCTGGCACCCTGAGGTGACGGCGGTGGAGCGA
GACGCTCTCAGCTTCATCTTTGCGGCGCTCGAAGACCCCGAGGTCCTGAC
GCCGGCGCTGACGCCGCAGCCATTCGTCCCCGACTGGATGGCAGTGGACG
CTCCGGCGGGGCCCCAGCCGGCGGACAGCCGTGCGGAGCGGCGGCGGGCG
GAGCGCGAGCGCAGGAAGCAGGAGGAGCGCGACTGA
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