mRNA_P-wetherbeei_contig1836.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1836.2.1 vs. uniprot
Match: A0A812VDT6_SYMPI (TIL protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812VDT6_SYMPI) HSP 1 Score: 125 bits (313), Expect = 1.850e-29 Identity = 56/119 (47.06%), Postives = 81/119 (68.07%), Query Frame = 3
Query: 285 KSAPIDINFTYNNGAFDGKKKEMQQRGWIYNAKTKAEWRIAPKI--VGPV--YLPMKLPYIILSCEDDYSSTVIGYPSRAYLWIMAREPAMSPEAYQKALDLAKSCGYDLSHLRVVPQI 629
K I +++ +N A DG+ + QRGW++N T AEWR++PK+ +G Y +KLPYII+ C DYSS ++GYPSR YLWI++R+PA+S YQK ++ +K GYD + +R VPQI
Sbjct: 79 KKQRIGVHYRFNEKALDGRINDSYQRGWVWNKDTNAEWRVSPKLPLLGYFFSYCGLKLPYIIVDCASDYSSAIVGYPSRTYLWILSRKPAVSDAEYQKLIEKSKELGYDEAKIRKVPQI 197
BLAST of mRNA_P-wetherbeei_contig1836.2.1 vs. uniprot
Match: A0A835YRJ4_9STRA (Lipocalin/cytosolic fatty-acid binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRJ4_9STRA) HSP 1 Score: 114 bits (286), Expect = 5.980e-26 Identity = 51/120 (42.50%), Postives = 75/120 (62.50%), Query Frame = 3
Query: 276 DPSKSAPIDINFTYNNGAFDGKKKEMQQRGWIYNAKTKAEWRIAPKIVGPVYLPMKLPYIILSCED---DYSSTVIGYPSRAYLWIMAREPAMSPEAYQKALDLAKSCGYDLSHLRVVPQ 626
+ S ID++F +N G+F G EM+Q+GW+ N +T EWR++P + G +P K PYII + Y +T+IGYP R+YLW+MAR+P +S + YQ + K GYDL ++ VPQ
Sbjct: 52 EAGSSYDIDVSFKFNKGSFAGSVSEMRQKGWVKNKETFTEWRVSPIVAG-FTIPYKAPYIICDITEGKSQYETTIIGYPDRSYLWVMARQPQISDDTYQSQMAKVKEMGYDLEKVQKVPQ 170
BLAST of mRNA_P-wetherbeei_contig1836.2.1 vs. uniprot
Match: A0A812SZ76_9DINO (TIL protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812SZ76_9DINO) HSP 1 Score: 122 bits (307), Expect = 1.230e-25 Identity = 53/120 (44.17%), Postives = 82/120 (68.33%), Query Frame = 3
Query: 288 SAPIDINFTYNNGAFDGKKKEMQQRGWIYNAKTKAEWRIAPKIVGPVY------LPMKLPYIILSCEDDYSSTVIGYPSRAYLWIMAREPAMSPEAYQKALDLAKSCGYDLSHLRVVPQI 629
S I +++ +N A DG+ + QRGW++N +T AEWR++PK+ P++ L +KLPYII+ C +DYS ++GYP+RAYLWI++R+P +S YQK + +K GYD + +R VPQ+
Sbjct: 1114 SQRIGVHYRFNENALDGRINDSYQRGWLWNKETSAEWRVSPKL--PLFGYFFSHLGLKLPYIIVDCAEDYSQAIVGYPNRAYLWILSRKPTVSDADYQKLIQKSKDLGYDEAKIRKVPQV 1231
BLAST of mRNA_P-wetherbeei_contig1836.2.1 vs. uniprot
Match: A0A812VWN3_9DINO (TIL protein n=5 Tax=Symbiodinium TaxID=2949 RepID=A0A812VWN3_9DINO) HSP 1 Score: 120 bits (301), Expect = 6.840e-25 Identity = 54/122 (44.26%), Postives = 81/122 (66.39%), Query Frame = 3
Query: 273 YDPSKSAPIDINFTYNNGAFDGKKKEMQQRGWIYNAKTKAEWRIAPKIVGPVYL----PMKLPYIILSCEDDYSSTVIGYPSRAYLWIMAREPAMSPEAYQKALDLAKSCGYDLSHLRVVPQ 626
+D SK I +++ +N + DG+ + QRGW++N +T AEWR++PK+ YL +KLPYII+ C DDYS ++GYP+RAYLWI++R+P +S Y+K + +K GYD +R VPQ
Sbjct: 1063 WDESKQR-IGVHYRFNEKSMDGRINDSYQRGWVWNKETSAEWRVSPKLPLFGYLLSYCGLKLPYIIVDCADDYSKAIVGYPNRAYLWILSRKPTVSDADYEKLIQKSKELGYDEDKIRKVPQ 1183
BLAST of mRNA_P-wetherbeei_contig1836.2.1 vs. uniprot
Match: A0A8J6C9W4_DIALT (Lipocln_cytosolic_FA-bd_dom domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C9W4_DIALT) HSP 1 Score: 110 bits (276), Expect = 1.100e-24 Identity = 48/108 (44.44%), Postives = 70/108 (64.81%), Query Frame = 3
Query: 303 INFTYNNGAFDGKKKEMQQRGWIYNAKTKAEWRIAPKIVGPVYLPMKLPYIILSCEDDYSSTVIGYPSRAYLWIMAREPAMSPEAYQKALDLAKSCGYDLSHLRVVPQ 626
+++ +N DGK E +QRG+I+N T + R++PK+ Y P++LPY+I DDY +T++GYPSR+YLWIMAR P + Y K +D K GYD + +R VPQ
Sbjct: 55 VHYKFNEAKADGKVSESEQRGYIHNYDTFTDLRVSPKLPLFGYTPLRLPYLICHLSDDYQTTIVGYPSRSYLWIMARTPTLPDAEYAKLIDKTKQMGYDPAQIRKVPQ 162
BLAST of mRNA_P-wetherbeei_contig1836.2.1 vs. uniprot
Match: A0A514XFM6_9PROT (Outer membrane lipoprotein Blc n=2 Tax=unclassified Bdellovibrio TaxID=2633795 RepID=A0A514XFM6_9PROT) HSP 1 Score: 109 bits (272), Expect = 3.600e-24 Identity = 50/116 (43.10%), Postives = 71/116 (61.21%), Query Frame = 3
Query: 282 SKSAPIDINFTYNNGAFDGKKKEMQQRGWIYNAKTKAEWRIAPKIVGPVYLPMKLPYIILSCEDDYSSTVIGYPSRAYLWIMAREPAMSPEAYQKALDLAKSCGYDLSHLRVVPQI 629
SK ID++F YN + G K Q+ WIY+ KT AEWR+ P + P+K Y+++ DDYS TVIG PSR Y+WIM+R+P M + Y + K+ GYD+S ++ VPQ+
Sbjct: 64 SKEERIDVDFRYNADSPTGPVKRYPQKAWIYDKKTNAEWRVQP------WWPLKFAYLVIDLADDYSYTVIGVPSRNYVWIMSRKPTMPSDVYDTLVAKLKASGYDISKIQKVPQV 173
BLAST of mRNA_P-wetherbeei_contig1836.2.1 vs. uniprot
Match: A0A2E4WJ76_9BACT (Lipocln_cytosolic_FA-bd_dom domain-containing protein n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A2E4WJ76_9BACT) HSP 1 Score: 106 bits (265), Expect = 1.860e-23 Identity = 48/112 (42.86%), Postives = 73/112 (65.18%), Query Frame = 3
Query: 297 IDINFTYNNGAFDGKKKEMQQRGWIYNAKTKAEWRIAPKIVGPVYLPMKLPYIILSCEDDYSSTVIGYPSRAYLWIMAREPAMSPEAYQKALDLAKSCGYDLSHLRVVPQIE 632
ID+ F++N +F G K++ Q+ +IYN KT AEWRI P + P+KLPY+++ +++YS TVIGYPSR +LWIM+R +++ E K + + GYD S ++ VP E
Sbjct: 48 IDVIFSFNQDSFSGTPKKLTQKAYIYNKKTNAEWRIQP------FWPLKLPYLVIDLDEEYSYTVIGYPSRKFLWIMSRSKSLNEEILSKIYEKLNAQGYDTSLIQQVPHSE 153
BLAST of mRNA_P-wetherbeei_contig1836.2.1 vs. uniprot
Match: A0A2E3DQD2_9BACT (Lipocln_cytosolic_FA-bd_dom domain-containing protein n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A2E3DQD2_9BACT) HSP 1 Score: 107 bits (266), Expect = 2.750e-23 Identity = 52/118 (44.07%), Postives = 72/118 (61.02%), Query Frame = 3
Query: 273 YDPSKSAPIDINFTYNNGAFDGKKKEMQQRGWIYNAKTKAEWRIAPKIVGPVYLPMKLPYIILSCEDDYSSTVIGYPSRAYLWIMAREPAMSPEAYQKALDLAKSCGYDLSHLRVVPQ 626
Y S + I+ F++ G DG+KK +G+IYN +T AEWR+ P K+P++I+ + DYS TVIGYPSR Y+WIMAREP M + Y+ LD GYD+S ++ VPQ
Sbjct: 66 YALSDNGIIETTFSFYKGTPDGEKKIYYPKGFIYNKETNAEWRMQ------FLWPFKMPFLIIELDQDYSYTVIGYPSRKYVWIMAREPIMKEDRYKMILDNLSDIGYDISLIQKVPQ 177
BLAST of mRNA_P-wetherbeei_contig1836.2.1 vs. uniprot
Match: A0A2E5I3W6_9BACT (Lipocln_cytosolic_FA-bd_dom domain-containing protein n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A2E5I3W6_9BACT) HSP 1 Score: 106 bits (264), Expect = 3.360e-23 Identity = 46/109 (42.20%), Postives = 72/109 (66.06%), Query Frame = 3
Query: 297 IDINFTYNNGAFDGKKKEMQQRGWIYNAKTKAEWRIAPKIVGPVYLPMKLPYIILSCEDDYSSTVIGYPSRAYLWIMAREPAMSPEAYQKALDLAKSCGYDLSHLRVVP 623
ID+ F++N +F G++K++ Q+ +IYN+ T AEWRI P + P+KLPY+++ ++DY TVIGYPSR +LWIM+R + E + D ++ GYD S ++ VP
Sbjct: 58 IDVTFSFNKDSFSGERKQLTQKAFIYNSTTNAEWRIQP------FWPLKLPYLVIDLDEDYQYTVIGYPSRKFLWIMSRSKNLDKETLRIIYDKLEAQGYDASMIQKVP 160
BLAST of mRNA_P-wetherbeei_contig1836.2.1 vs. uniprot
Match: UPI001BC21A3E (Lipocalin family protein n=2 Tax=Methylococcaceae TaxID=403 RepID=UPI001BC21A3E) HSP 1 Score: 103 bits (258), Expect = 3.080e-22 Identity = 47/109 (43.12%), Postives = 68/109 (62.39%), Query Frame = 3
Query: 297 IDINFTYNNGAFDGKKKEMQQRGWIYNAKTKAEWRIAPKIVGPVYLPMKLPYIILSCEDDYSSTVIGYPSRAYLWIMAREPAMSPEAYQKALDLAKSCGYDLSHLRVVP 623
IDI+FTYN G+F+G+ K + Q+GWIY+ KT+A W+++P + P+K Y++++ +DYS T IG P + YLWIMAR+ A A K GYD +L VP
Sbjct: 70 IDIDFTYNRGSFNGELKSLPQKGWIYDTKTQAHWKVSP------FWPLKFDYLVVALAEDYSWTAIGVPDQKYLWIMARDWKNPDSAVAAATRALKDAGYDAQNLVTVP 172 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1836.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1836.2.1 >prot_P-wetherbeei_contig1836.2.1 ID=prot_P-wetherbeei_contig1836.2.1|Name=mRNA_P-wetherbeei_contig1836.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=127bp MQQRGWIYNAKTKAEWRIAPKIVGPVYLPMKLPYIILSCEDDYSSTVIGYback to top mRNA from alignment at P-wetherbeei_contig1836:1731..3759+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1836.2.1 ID=mRNA_P-wetherbeei_contig1836.2.1|Name=mRNA_P-wetherbeei_contig1836.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2029bp|location=Sequence derived from alignment at P-wetherbeei_contig1836:1731..3759+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1836:1731..3759+ >mRNA_P-wetherbeei_contig1836.2.1 ID=mRNA_P-wetherbeei_contig1836.2.1|Name=mRNA_P-wetherbeei_contig1836.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=381bp|location=Sequence derived from alignment at P-wetherbeei_contig1836:1731..3759+ (Phaeothamnion wetherbeei SAG_119_79)back to top |