prot_P-wetherbeei_contig1831.2.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1831.2.2
Unique Nameprot_P-wetherbeei_contig1831.2.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length160
Homology
BLAST of mRNA_P-wetherbeei_contig1831.2.2 vs. uniprot
Match: A0A6H5KTC2_9PHAE (Ribosomal_L28e domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTC2_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 4.040e-45
Identity = 82/159 (51.57%), Postives = 105/159 (66.04%), Query Frame = 0
Query:    1 MVQLSKDLTWLLVKDNNCFLQKRNGKTPRSGFITMSAEPLNLTNKNSFKASGLANTRAVGIEEGKDFKGNSVAFLQLKASCIFGGGASKPKLAVGATLLKKCWRSGANTVTKQVEGTYYRPDLTGAALTRWSKIHRSIRTAGGHKKPMIVKAGRSSKSA 159
            M  +S +L W LV+ N CFL KRNG+T RSG + ++AEP NLTN NS+K SGLAN++AVGI+  KD K    A + LK+S       +KPK +VG +LLKK   S +  + KQ  GT YRPDL  AAL RWSK+HR++R   G +KPM V AGR +  A
Sbjct:    1 MTNVSNELVWSLVRRNTCFLYKRNGQTKRSGKVVLTAEPNNLTNVNSYKYSGLANSKAVGIQFAKDPKDRPCAAITLKSS----KNGNKPKKSVGRSLLKKTHPSVSQAIMKQTGGTNYRPDLQHAALVRWSKVHRALRVQKGERKPMTVNAGRKNLKA 155          
BLAST of mRNA_P-wetherbeei_contig1831.2.2 vs. uniprot
Match: A0A836CDH5_9STRA (Putative 60S ribosomal protein L28 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDH5_9STRA)

HSP 1 Score: 134 bits (337), Expect = 2.890e-37
Identity = 76/152 (50.00%), Postives = 94/152 (61.84%), Query Frame = 0
Query:    8 LTWLLVKDNNCFLQKRNGKTPRSGFITMSAEPLNLTNKNSFKASGLANTRAVGIEEGKDFKGNSVAFLQLKASCIFGGGASKPKLAVGATLLKKCWRSGANTVTKQVEGTYYRPDLTGAALTRWSKIHRSIRTAGGHKKPMIVKAGRSSKSA 159
            L W LV+ NNCF+QKRNG T RSG + +S EP+NL N +SFK SGLAN++AVGI EG D KG     L  K+S       ++P  AV  TLLKK  RS A  V     GT+YR DLT  AL R+  ++R+ R   G  KPM+ K  R+ KSA
Sbjct:    8 LVWSLVRQNNCFMQKRNGNTRRSGRVVLSGEPMNLKNVHSFKYSGLANSKAVGIAEGADDKGRPCVVLTQKSSKK----VNQPAKAVAQTLLKKNNRSSARAVKAITAGTFYREDLTQDALARFCIVNRATRAKRGLAKPMVTKGRRAKKSA 155          
BLAST of mRNA_P-wetherbeei_contig1831.2.2 vs. uniprot
Match: K0RNK4_THAOC (Ribosomal_L28e domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RNK4_THAOC)

HSP 1 Score: 107 bits (268), Expect = 7.820e-27
Identity = 66/160 (41.25%), Postives = 92/160 (57.50%), Query Frame = 0
Query:    1 MVQLSKDLTWLLVKDNNCFLQKRNGKTPRSGFITMSAEPLNLTNKNSFKASGLANTRAVGIEEGKDFKGNSVAFLQLKAS-CIFGGGASKPKLAVGATLLKKCWRSGANTVTKQVEGTYYRPDLTGAALTRWSKIHRSIRTAGGHKKPMIVKAGRSSKSA 159
            MV  +  L W LVK+NN F++K++G+T RSG I  S E  NLTNK+S+K SGLAN++ + I       G++ A L LK       G + K ++A     L K +R    T+  Q    YYRPDL  AAL +++ ++RS R A G KK + VK GR +  A
Sbjct:    1 MVAAADSLVWELVKNNNSFMRKKSGRTSRSGSIRFSVERGNLTNKSSYKYSGLANSKTIDISS----VGDNKAALTLKTKKAATSGKSGKTEIA-----LNKDFRRSEKTIKSQATDNYYRPDLKSAALAKYTVVYRSNRVAKGVKKAVPVKKGRGNSEA 151          
BLAST of mRNA_P-wetherbeei_contig1831.2.2 vs. uniprot
Match: A0A7S2EU82_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EU82_TRICV)

HSP 1 Score: 106 bits (264), Expect = 2.650e-26
Identity = 66/157 (42.04%), Postives = 85/157 (54.14%), Query Frame = 0
Query:    1 MVQLSKDLTWLLVKDNNCFLQKRNGKTPRSGFITMSAEPLNLTNKNSFKASGLANTRAVGIEEGKDFKGNSVAFLQLKASCIFGGGASKPKLAVGATLLKKCWRSGANTVTKQVEGTYYRPDLTGAALTRWSKIHRSIRTAGGHKKPMIVKAGRSSK 157
            MV     L W LV  NNCF++K NG+T RSG I  S EP NL + ++ + SG+ANT+AVGI    DF     A L  K +      ++ PK       L K +R    T+  QV    YRPDL GAA  ++S ++R+ R A G KK   VK GRS K
Sbjct:    1 MVHCPDALVWQLVNRNNCFMKKTNGRTSRSGSIKFSVEPGNLRSLSTLRYSGIANTKAVGI----DFAEGDKAVLTTKTASK---ASTAPKKGRATIPLNKDYRRTEKTIRSQVLDNRYRPDLVGAATAKYSAVYRANRFAKGVKKAPAVKKGRSKK 150          
BLAST of mRNA_P-wetherbeei_contig1831.2.2 vs. uniprot
Match: A0A7S2DNV5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DNV5_9STRA)

HSP 1 Score: 103 bits (257), Expect = 3.930e-25
Identity = 64/159 (40.25%), Postives = 81/159 (50.94%), Query Frame = 0
Query:    1 MVQLSKDLTWLLVKDNNCFLQKRNGKTPRSGFITMSAEPLNLTNKNSFKASGLANTRAVGI---EEGKDFKGNSVAFLQLKASCIFGGGASKPKLAVGATLLKKCWRSGANTVTKQVEGTYYRPDLTGAALTRWSKIHRSIRTAGGHKKPMIVKAGRSS 156
            M      LTW+LVK+ NCF QKRNG+T RSG I +S+EP NL N N+FK SGLAN++A+     EEG+D        + LK S        +P        L K +R     +  Q     YR DL  AAL RWS +HR  +   G  KP   K  + S
Sbjct:    1 MATCPDSLTWMLVKNQNCFQQKRNGQTKRSGMIVLSSEPGNLRNINAFKYSGLANSKAIRFDFKEEGEDDDKKIKMSMGLKIS----KNGKRPNKQYSTIPLNKDFRRVEKCIKAQTVDQAYRADLLDAALARWSALHRYSKVKKGIMKPAYFKPAKGS 155          
BLAST of mRNA_P-wetherbeei_contig1831.2.2 vs. uniprot
Match: A0A6V2ABZ3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2ABZ3_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 1.320e-23
Identity = 62/156 (39.74%), Postives = 86/156 (55.13%), Query Frame = 0
Query:    1 MVQLSKDLTWLLVKDNNCFLQKRNGKTPRSGFITMSAEPLNLTNKNSFKASGLANTRAVGIEEGKDFKGNSVAFLQLKASCIFGGGASKPKLAVGATLLKKCWRSGANTVTKQVEGTYYRPDLTGAALTRWSKIHRSIRTAGGHKKPMIVKAGRSS 156
            MVQ+S  L W LVK N  F++K NG++ RSG I  S E  N+ + NSFK SGLAN++ + I    D +G     L  K         ++ K    AT L K +R   +T+  Q    YYRPDL+  AL +WS ++R+ R A G KK + +K GR +
Sbjct:    1 MVQISDSLCWELVKKNTSFMKKVNGRSRRSGTIQFSVEKGNVKSINSFKYSGLANSKTIDIASTADNRG----MLSTKTKKAH----NEVKKGQAATPLNKDFRRVEHTIKSQALDNYYRPDLSKDALAKWSAVYRANRYAKGIKKTLPMKKGRKT 148          
BLAST of mRNA_P-wetherbeei_contig1831.2.2 vs. uniprot
Match: A0A1Z5JGY5_FISSO (Large subunit ribosomal protein L28e n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JGY5_FISSO)

HSP 1 Score: 97.8 bits (242), Expect = 5.250e-23
Identity = 59/156 (37.82%), Postives = 86/156 (55.13%), Query Frame = 0
Query:    1 MVQLSKDLTWLLVKDNNCFLQKRNGKTPRSGFITMSAEPLNLTNKNSFKASGLANTRAVGIEEGKDFKGNSVAFLQLKASCIFGGGASKPKLAVGATLLKKCWRSGANTVTKQVEGTYYRPDLTGAALTRWSKIHRSIRTAGGHKKPMIVKAGRSS 156
            MV +   LTW +V+ NNCFL+KRNG+T RSG +  S EP N  + N  K S +AN++A+ +     F G + A L  K +     G S  K+AV    + K +R     +  Q    +YR DL GA L +++ ++++ R A G  KP+ VK GR S
Sbjct:    1 MVAIPDQLTWEIVRRNNCFLKKRNGQTKRSGSVQFSVEPGNCKSLNQLKYSAIANSKALDVV----FSGENRAQLIKKTA-----GKSGSKVAVAKINVNKDFRRSEKVIVGQGIDNFYRQDLKGAVLAKYTAVYQANRRAKGITKPVPVKKGRKS 147          
BLAST of mRNA_P-wetherbeei_contig1831.2.2 vs. uniprot
Match: A0A7S0G6T1_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G6T1_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 4.900e-22
Identity = 61/156 (39.10%), Postives = 89/156 (57.05%), Query Frame = 0
Query:    1 MVQLSKDLTWLLVKDNNCFLQKRNGKTPRSGFITMSAEPLNLTNKNSFKASGLANTRAVGIEEGKDFKGNSVAFLQLKASCIFGGGASKPKLAVGATLLKKCWRSGANTVTKQVEGTYYRPDLTGAALTRWSKIHRSIRTA-GGHKKPMIVKAGRS 155
            MVQ+S+ L W LVK+NNCF++ RNG++ R+G I  S+EP NL N ++F+ SG+   + + I    D   N V  L++K+       + K    +  T L KC+R    T+  Q    YYR DL  AAL ++S I+R  + A G  KK + VK GR+
Sbjct:    1 MVQISESLAWELVKNNNCFMKIRNGRSARTGSIRFSSEPGNLRNISTFQDSGIVKEKTLDIAATSD---NRVT-LKIKSK------SGK----IRTTPLNKCFRRSEKTIMSQAISNYYRSDLKKAALAKYSAIYRGNKVATGSTKKRVPVKKGRN 142          
BLAST of mRNA_P-wetherbeei_contig1831.2.2 vs. uniprot
Match: A0A448YV76_9STRA (Ribosomal_L28e domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YV76_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 1.750e-21
Identity = 56/156 (35.90%), Postives = 84/156 (53.85%), Query Frame = 0
Query:    1 MVQLSKDLTWLLVKDNNCFLQKRNGKTPRSGFITMSAEPLNLTNKNSFKASGLANTRAVGIEEGKDFKGNSVAFLQLKASCIFGGGASKPKLAVGATLLKKCWRSGANTVTKQVEGTYYRPDLTGAALTRWSKIHRSIRTAGGHKKPMIVKAGRSS 156
            MV +S  L W ++K NN FL+KRNGKT RSG I  S+E  N+ + N FK SGLANT+   +    D K   +  ++  + C       K  +A+     K  +R   +T+ K     +YR DL  A L +W+K++++ + A G KK +  K GR +
Sbjct:    1 MVAVSDQLVWEVIKSNNSFLKKRNGKTSRSGKIEFSSEKGNVKSLNRFKYSGLANTKVCDVVCTDDNKAELI--VKTASKCATQPAKGKASIALN----KSDFRKVESTIKKSTSDVFYRRDLEAAMLGKWTKVYQANKRANGVKKGVPPKMGRGT 150          
BLAST of mRNA_P-wetherbeei_contig1831.2.2 vs. uniprot
Match: U9TQU6_RHIID (Ribosomal_L28e domain-containing protein n=6 Tax=Rhizophagus TaxID=1129544 RepID=U9TQU6_RHIID)

HSP 1 Score: 93.6 bits (231), Expect = 1.950e-21
Identity = 59/143 (41.26%), Postives = 80/143 (55.94%), Query Frame = 0
Query:    4 LSKDLTWLLVKDNNCFLQKRNGKTPRSGFITMSAEPLNLTNKNSFKASGLANTRAVGIEEGKDFKGNSVAFLQLKASCIFGGGASKPKLAVGATLLKKCWRSGANTVTKQVEGTYYRPDLTGAALTRWSKIHRSIRTAGGHKK 146
            +S DLTWLLV++N+ FL KRNG       + +S+EP NLTN NSFK SGLAN +A+GI  G   +G +V   +   +        KP  A+    L K  R  A + T  +  ++YRPDL  AAL R S I++S +    H K
Sbjct:    1 MSADLTWLLVRNNSSFLVKRNG-------LELSSEPNNLTNLNSFKYSGLANKKAIGITPGPSNRGVTVVAKKTNIASY------KPAKAINKVTLTKGVRRSAKSFTSLLTKSHYRPDLRKAALARISAIYQSQKPPKVHAK 130          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1831.2.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KTC2_9PHAE4.040e-4551.57Ribosomal_L28e domain-containing protein n=2 Tax=E... [more]
A0A836CDH5_9STRA2.890e-3750.00Putative 60S ribosomal protein L28 n=1 Tax=Tribone... [more]
K0RNK4_THAOC7.820e-2741.25Ribosomal_L28e domain-containing protein n=1 Tax=T... [more]
A0A7S2EU82_TRICV2.650e-2642.04Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2DNV5_9STRA3.930e-2540.25Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6V2ABZ3_9STRA1.320e-2339.74Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A1Z5JGY5_FISSO5.250e-2337.82Large subunit ribosomal protein L28e n=2 Tax=Fistu... [more]
A0A7S0G6T1_9STRA4.900e-2239.10Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A448YV76_9STRA1.750e-2135.90Ribosomal_L28e domain-containing protein n=1 Tax=P... [more]
U9TQU6_RHIID1.950e-2141.26Ribosomal_L28e domain-containing protein n=6 Tax=R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029004Ribosomal L28e/Mak16PFAMPF01778Ribosomal_L28ecoord: 8..137
e-value: 1.5E-22
score: 80.5
NoneNo IPR availableGENE3D3.30.390.110coord: 5..141
e-value: 5.7E-33
score: 116.0
NoneNo IPR availablePANTHERPTHR10544:SF060S RIBOSOMAL PROTEIN L28coord: 1..146
IPR002672Ribosomal protein L28ePANTHERPTHR1054460S RIBOSOMAL PROTEIN L28coord: 1..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1831contigP-wetherbeei_contig1831:4071..5048 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1831.2.2mRNA_P-wetherbeei_contig1831.2.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1831 3789..5048 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1831.2.2 ID=prot_P-wetherbeei_contig1831.2.2|Name=mRNA_P-wetherbeei_contig1831.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=160bp
MVQLSKDLTWLLVKDNNCFLQKRNGKTPRSGFITMSAEPLNLTNKNSFKA
SGLANTRAVGIEEGKDFKGNSVAFLQLKASCIFGGGASKPKLAVGATLLK
KCWRSGANTVTKQVEGTYYRPDLTGAALTRWSKIHRSIRTAGGHKKPMIV
KAGRSSKSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029004L28e/Mak16
IPR002672Ribosomal_L28e