prot_P-wetherbeei_contig18273.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig18273.1.1
Unique Nameprot_P-wetherbeei_contig18273.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length97
Homology
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BLAST of mRNA_P-wetherbeei_contig18273.1.1 vs. uniprot
Match: A0A835YW79_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW79_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 4.840e-15
Identity = 49/101 (48.51%), Postives = 62/101 (61.39%), Query Frame = 0 
Query:    1 MAFCTVNRRLFTSGADATIRAWTLQR--EAPDGGGGYRVSLRPHAVMRRHTEVVQELLCVRDDDVEGGCCLVSAALDRCVHLWDTAACSFV--QVGGWAGI 97
            +A+  V++RLFT G  A+I  W L R  E   G G     LR  A + +HT+VV  LL VRDDDVEGG C+VSAALDR V+LWD     ++  +VG  A I
Sbjct:  178 LAWDGVSQRLFTVGGSASIAVWELDRTNEVETGLG-----LRRIATLTKHTDVVLALLAVRDDDVEGGHCIVSAALDRKVYLWDADKLEYMACKVGNTAAI 273
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BLAST of mRNA_P-wetherbeei_contig18273.1.1 vs. uniprot
Match: D7G4K6_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4K6_ECTSI)

HSP 1 Score: 52.4 bits (124), Expect = 1.050e-5
Identity = 26/47 (55.32%), Postives = 33/47 (70.21%), Query Frame = 0 
Query:   44 VMRRHTEVVQELLCVRDDDVEGGCCLVSAALDRCVHLWDTAACSFVQ 90
            V+RRHT+V+Q+LL V   + EGG  LVS  LDR V +WD A  +FVQ
Sbjct:   15 VLRRHTDVIQDLLAVSGTETEGGQRLVSCGLDRRVCIWDIAKGTFVQ 61
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18273.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835YW79_9STRA4.840e-1548.51Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G4K6_ECTSI1.050e-555.32EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..95
e-value: 4.9E-9
score: 37.6
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18273contigP-wetherbeei_contig18273:953..1243 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18273.1.1mRNA_P-wetherbeei_contig18273.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig18273 953..1243 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig18273.1.1 ID=prot_P-wetherbeei_contig18273.1.1|Name=mRNA_P-wetherbeei_contig18273.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=97bp
MAFCTVNRRLFTSGADATIRAWTLQREAPDGGGGYRVSLRPHAVMRRHTE
VVQELLCVRDDDVEGGCCLVSAALDRCVHLWDTAACSFVQVGGWAGI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf