mRNA_P-wetherbeei_contig18272.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18272.1.1
Unique NamemRNA_P-wetherbeei_contig18272.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18272.1.1 vs. uniprot
Match: A0A7X8XM07_9BURK (tRNA modification GTPase MnmE n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XM07_9BURK)

HSP 1 Score: 348 bits (893), Expect = 9.690e-113
Identity = 208/446 (46.64%), Postives = 281/446 (63.00%), Query Frame = 1
Query:   22 ETIVAIATPPGEGGVAIVRLSGSRALPIQTRLFRT---RSAAESHRLQFGELVGSDGALIDRCLSVWMQGPRSYTGEDVVEFHTHGGSTLAALTVQACLESGARLARPGEFTMRAFLNGKIDLAQAEAVQQIIASRHQKAAQLAAQNLVGAFSQQVETMRDQLLQWLTLLEAEIDFGDEIDSFPAEAGLQRCQTHLETLDRLLEGAQGGQMCAEGLRTVLLGPPNAGKSTLLNLILGKERALVTPIPGTTRDTLEEMTVLGGIVLHVVDTAGIRSEPGDLVEKLGIDRSRIQGAAADLILLVLDGSQPLPEMDEFVTLAENAA-TVVLLNKSDLGDAVVPEEIQRRLPHATVTKLSLIKAEG---MQTALDEITAAARRVTGQHDQVFTLTRRQLEALTRCRESLNLVRSTLEAGYSAEFVCLDLRKAIGALGEIQGIDITDEVLD 1338
            ETIVA+ATPPGEGGVAIVRLSG R+  I T++ R        ESHRL  G+   +    +D  L+V M+ PRSYT EDV E H HGG  +  L + +C+  GARLARPGEFT+RAFL+G+IDL QAE+V  +I +     A+LAA+ L GA S++V  +R  LL+W+   EAE DFGDE+     +    R +   E L  LL  A  G+ C EGL T+L+GPPNAGKSTL NL+LG+ERALVTP PGTTRD LE+    GG    +VD+AG+R   G  VE++G+DR R     A+++++VLD S P PE  EF++ A     TVV+LNK DL + +   E++ RL   +V    L++ E    ++ AL +  AA R   G+     ++ RRQ +AL R +E L  + S L+ G   + + +DLR A+ ALGEI G ++TDEVL+
Sbjct:   10 ETIVAVATPPGEGGVAIVRLSGPRSEAILTQVVRRPRPEGIWESHRLYAGQAFSATDHFLDEVLAVLMRAPRSYTREDVAEIHCHGGLVVPGLLLDSCVSRGARLARPGEFTLRAFLSGRIDLGQAESVLALIQAGSTGEARLAAEGLRGALSRRVAALRQDLLEWMAFWEAEFDFGDEVPGLSVQQVADRLKKAREALQGLLAEALEGRNCGEGLLTLLVGPPNAGKSTLWNLLLGEERALVTPYPGTTRDLLEQPLRFGGHYFRLVDSAGLRPGGGP-VERMGMDRCRQAVHQAEMLVVVLDSSLPWPEGLEFLSEASREVPTVVILNKRDLPERLGIREVEERLDCFSVVPTCLLRPEEAVPVRAALQD--AAKRAGAGRAAGALSVNRRQWQALARAQEHLETLESGLQDGMPWDCLAVDLRMAVSALGEITGENVTDEVLE 452          
BLAST of mRNA_P-wetherbeei_contig18272.1.1 vs. uniprot
Match: A0A7C1FH55_9CHLR (tRNA modification GTPase MnmE n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C1FH55_9CHLR)

HSP 1 Score: 321 bits (823), Expect = 2.680e-102
Identity = 200/445 (44.94%), Postives = 274/445 (61.57%), Query Frame = 1
Query:   22 ETIVAIATPPGEGGVAIVRLSGSRALPIQTRLF----RTRSAAESHRLQFGEL-VGSDGALIDRCLSVWMQGPRSYTGEDVVEFHTHGGSTLAALTVQACLESGARLARPGEFTMRAFLNGKIDLAQAEAVQQIIASRHQKAAQLAAQNLVGAFSQQVETMRDQLLQWLTLLEAEIDF-GDEIDSFPAEAGLQRCQTHLETLDRLLEGAQGGQMCAEGLRTVLLGPPNAGKSTLLNLILGKERALVTPIPGTTRDTLEEMTVLGGIVLHVVDTAGIRSEPGDLVEKLGIDRSRIQGAAADLILLVLDGSQPL-PEMDEFVTLAENAATVVLLNKSDLGDAVVPEEIQRRLPHATVTKLSLIKAEGMQTALDEITAAARRVTGQHDQVFTLTRRQLEALTRCRESLNLVRSTLEAGYSAEFVCLDLRKAIGALGEIQGIDITDEVL 1335
            +TIVAI TP GEGG+ I+RLSG  A PI   L     R     +  RL +G +   +DGA++D  L+VWM  PR+YT +DV E H HGG       ++ CL++GARLA PGEFT+RAFLNG+IDLAQAEAV  ++ +R +   Q A   L G  S+QV  +R  L+  L  LEA IDF  DEI +F  EA L R     E +DRLL GA+ G +  +G+RT ++G PN GKS+LLN +LG ERA+VTP+PGTTRDT+EE  +LGGI L +VDTAGIR +  D VE+LG++RS+   AAADL+LLVLDGS+PL P+    + LA    TV+++NK+DL  A   E     LP   ++ L+    + ++  + E     R   G+   V     R +EAL R R  +         G+  + + +D+R A+ ALGEI G  +++++L
Sbjct:    7 DTIVAIGTPLGEGGIGIIRLSGPEARPILECLVVPARRGGHGWQPWRLTYGHVREPADGAIVDEVLAVWMPAPRTYTRQDVAEIHCHGGYLPLRRVLELCLQAGARLAEPGEFTLRAFLNGRIDLAQAEAVADVVRARSRVGLQSAVGQLEGRLSRQVREIRAGLVAALAHLEAAIDFPADEIPAFDLEAALARTG---EAIDRLLGGAEQGILYRQGIRTAIVGRPNVGKSSLLNALLGSERAIVTPVPGTTRDTVEETALLGGIPLVLVDTAGIR-KTADPVERLGVERSQRAIAAADLVLLVLDGSEPLTPDDRAIMDLARGRPTVLVVNKADLPPAPGMEAPSAGLPTVHISALTGEGLDRLERTVLETVLGGRVQAGEAPLVSRP--RHVEALRRARAHVAAALEAYREGWPEDCLAVDVRGAVSALGEITGETVSEDLL 445          
BLAST of mRNA_P-wetherbeei_contig18272.1.1 vs. uniprot
Match: A0A2N6F307_9DELT (tRNA modification GTPase MnmE n=1 Tax=Desulfuromonas sp. TaxID=892 RepID=A0A2N6F307_9DELT)

HSP 1 Score: 311 bits (797), Expect = 2.140e-98
Identity = 192/445 (43.15%), Postives = 271/445 (60.90%), Query Frame = 1
Query:   22 ETIVAIATPPGEGGVAIVRLSGSRALPIQTRLFRTRSAA---ESHRLQFGELVGSDGALIDRCLSVWMQGPRSYTGEDVVEFHTHGGSTLAALTVQACLESGARLARPGEFTMRAFLNGKIDLAQAEAVQQIIASRHQKAAQLAAQNLVGAFSQQVETMRDQLLQWLTLLEAEIDFGDEIDSFPAEAGL-QRCQTHLETLDRLLEGAQGGQMCAEGLRTVLLGPPNAGKSTLLNLILGKERALVTPIPGTTRDTLEEMTVLGGIVLHVVDTAGIRSEPGDLVEKLGIDRSRIQGAAADLILLVLDGSQPLPEMDEFV-TLAENAATVVLLNKSDLGDAVVPEEIQR-RLPHATVTKLSLIKAEGMQTALDEITAAARRVTGQHDQVFTLTRRQLEALTRCRESLNLVRSTLEAGYSAEFVCLDLRKAIGALGEIQGIDITDEVLD 1338
            ETIVA AT  GEGG+ I+RLSG+ A     R FR   +    ESH+L  G L+ S G+L+D  L+V M+ PRSYTGE++VE H HGG  +    V   +++G RLARPGEFT+RAFLNG++DL++AEAV  +I SR + A+QLA + L GA S+ +  +R++L++ L+L+EA IDF DE  S PA A L    +   + +D LL     G++  EGL  ++LG PN GKS+LLN +LG+ RA+VT IPGTTRDT+EE  V+ G+ + ++DTAG+ +   D +E  G+ R+  +   ADL+LLV+DGSQ     D F   L E    ++++NKSD      P  + R R      T +S     G+    D+I +         +      RR  EAL R RE+LN   +++++    EF+ LDLR+A+ ALGEI G    DE+LD
Sbjct:    8 ETIVAPATAVGEGGIGIIRLSGTSAELTLQRFFRPSRSVDVFESHQLYHGHLLDSSGSLLDEVLAVVMRAPRSYTGEEIVEVHCHGGPVIIRQIVDLFIDAGLRLARPGEFTLRAFLNGRLDLSRAEAVIDLIRSRSESASQLAVRQLDGALSRIIYDLRERLVENLSLIEAHIDFPDEDISPPALANLCANVKKARDEIDPLLASFDSGRVLREGLNVLILGRPNVGKSSLLNALLGESRAIVTDIPGTTRDTVEESFVISGLPIRLIDTAGVHAT-SDPIEAEGVRRATEKVKTADLVLLVVDGSQEASPDDFFAFDLVEKDRALLVVNKSDC-----PAVLDRSRFSGLAATPVSAKNGAGLDLLKDKIASLFSAGGEVSESTMISDRRHREALLRSREALNRFLASVQSAQEPEFLALDLREALHALGEITGETTPDEILD 446          
BLAST of mRNA_P-wetherbeei_contig18272.1.1 vs. uniprot
Match: A0A533RHD7_9DELT (tRNA modification GTPase MnmE n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A533RHD7_9DELT)

HSP 1 Score: 310 bits (793), Expect = 9.880e-98
Identity = 198/452 (43.81%), Postives = 271/452 (59.96%), Query Frame = 1
Query:    1 RPGVDALETIVAIATPPGEGGVAIVRLSGSRALPIQTRLFRTR---SAAESHRLQFGELVGSDGALIDRCLSVWMQGPRSYTGEDVVEFHTHGGSTLAALTVQACLESGARLARPGEFTMRAFLNGKIDLAQAEAVQQIIASRHQKAAQLAAQNLVGAFSQQVETMRDQLLQWLTLLEAEIDF-GDEIDSFPAEAGLQRCQTHLETLDRLLEGAQGGQMCAEGLRTVLLGPPNAGKSTLLNLILGKERALVTPIPGTTRDTLEEMTVLGGIVLHVVDTAGIRSEPGDLVEKLGIDRSRIQGAAADLILLVLDGSQPLPEMDEF-VTLAENAATVVLLNKSDLGDAVVPEEIQRRLPHATVTKLSLIKAEGMQTAL-DEITAAARRVTGQHDQVFTLTRRQLEALTRCRESLNLVRSTLEAGYSAEFVCLDLRKAIGALGEIQGIDITDEVLD 1338
            R    A +TIVA ATPPG+GG+ IVRLSG +A  +   +FR R   +A  SHRL  G L  + G  +D  L+V M+ PRSYTGEDVVE H HGGS L    +   L +GARLARPGEFT RAFLNG++DLAQAEAV  +I SR  +AA+ A   L G  SQQ+     +L + L LLEA IDF  D++     EA + R +     +  LL     G++  EGL  ++LG PN GKS+LLN +LG+ RA+VT IPGTTRDT+EE  VLGG+ L +VDTAG+R+   D +E  G+ R+R + AAADL+LLV+DG++PL + D   + + + A T+++ NK DL  A   +E+        V+       + +Q A+    +A   R  G  D V    RR  EAL    ++L+   +   A   AE + ++LR+A+ ALG+I G    D +L+
Sbjct:    3 RTAAPASDTIVAPATPPGDGGIGIVRLSGPQAEQLLGGVFRGRLAPAAMASHRLYHGRLCDAAGRPVDEVLAVIMRAPRSYTGEDVVEVHCHGGSQLLRCALDLFLAAGARLARPGEFTERAFLNGRLDLAQAEAVAALIGSRSARAARAALAQLDGRLSQQLYRYTAELRELLLLLEAHIDFPDDDLGPLDGEALVARTRAVRTAMTGLLHSFDTGRVLREGLNVLILGRPNVGKSSLLNALLGEARAIVTDIPGTTRDTIEEQLVLGGLPLRLVDTAGVRATD-DPIELEGVRRAREKVAAADLVLLVIDGARPLNDEDRMALAMVQPARTILVRNKCDLPPAAPADELAGFPCQVAVSVRQGTGLDALQAAVVAHFSATGDREAG--DGVVLTERRHREALAGALQALDRFLAAQAAAEPAECLAMELREALAALGQITGETTPDLILE 451          
BLAST of mRNA_P-wetherbeei_contig18272.1.1 vs. uniprot
Match: A0A2J6J0S9_9DELT (tRNA modification GTPase MnmE n=1 Tax=Desulfuromonas sp. TaxID=892 RepID=A0A2J6J0S9_9DELT)

HSP 1 Score: 309 bits (791), Expect = 1.700e-97
Identity = 189/446 (42.38%), Postives = 274/446 (61.43%), Query Frame = 1
Query:   22 ETIVAIATPPGEGGVAIVRLSGSRALPIQTRLFRTRSAA---ESHRLQFGELVGSDGALIDRCLSVWMQGPRSYTGEDVVEFHTHGGSTLAALTVQACLESGARLARPGEFTMRAFLNGKIDLAQAEAVQQIIASRHQKAAQLAAQNLVGAFSQQVETMRDQLLQWLTLLEAEIDFGDEIDSFPAEAGLQRCQTHLET-LDRLLEGAQGGQMCAEGLRTVLLGPPNAGKSTLLNLILGKERALVTPIPGTTRDTLEEMTVLGGIVLHVVDTAGIRSEPGDLVEKLGIDRSRIQGAAADLILLVLDGSQPLPEMDEF-VTLAENAATVVLLNKSDLG--DAVVPEEIQRRLPHATVTKLSLIKAEGMQTALDEITAAARRVTGQHDQVFTLTRRQLEALTRCRESLNLVRSTLEAGYSAEFVCLDLRKAIGALGEIQGIDITDEVLD 1338
            +TIVA AT  GEGG+ IVR+SG+ A  +  R FR+  A    ESHRL +G +   DGA ID  ++V M+ PRSYTGEDVVE H HGG  +    +   +E+G RLA PGEFT+RAFLNG++DL +AEAV  +I SR + A QLA + + GA S+ V ++RD+L++ L L+EA IDF +E  S P  A L      + + +DRLL G    ++  EGL  ++LG PN GKS+LLN +LG+ RA+VT IPGTTRDT+EE   + GI L ++DTAG+  +  DLVE  G+ R+ ++   ADL+L V+DGSQP+ + D   + +A++   ++++NKSD    +   P      +P +  T   L   +G++  +  +  +   ++   +      RR  EAL R  E+L   R  + A +  EF+ LDL++A+ ALGEI G    D++LD
Sbjct:    8 QTIVAPATAVGEGGIGIVRVSGTSAEAMLQRFFRSPGAVDQFESHRLYYGHIFDPDGAPIDEVMAVIMRAPRSYTGEDVVEVHCHGGPLIIRRILDLFIEAGLRLAHPGEFTLRAFLNGRLDLTRAEAVIDVIRSRSEAAGQLALRQMDGALSRVVYSLRDRLVEHLALVEAHIDFPEEDISPPTIARLAEDVDAVSSEIDRLLAGFDSCRVLREGLNVLILGRPNVGKSSLLNALLGESRAIVTDIPGTTRDTVEESLEIAGIPLRLIDTAGVH-DTSDLVEAEGVRRAGLRAETADLVLFVIDGSQPVCDDDLLALEMAKDKRCLLVVNKSDRETLELTPPFTDLEAVPLSAKTGSGL---DGLKEKISTLFFSGGEIS---ESTLVSDRRHREALLRANEALTRFREAISATHDPEFLALDLKEALQALGEITGETTPDDILD 446          
BLAST of mRNA_P-wetherbeei_contig18272.1.1 vs. uniprot
Match: A0A357R4N1_9FIRM (tRNA modification GTPase MnmE n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A357R4N1_9FIRM)

HSP 1 Score: 308 bits (790), Expect = 2.330e-97
Identity = 188/447 (42.06%), Postives = 272/447 (60.85%), Query Frame = 1
Query:   19 LETIVAIATPPGEGGVAIVRLSGSRALPIQTRLF--RTRSAAESHRLQFGELVGSDGALIDRCLSVWMQGPRSYTGEDVVEFHTHGGSTLAALTVQACLESGARLARPGEFTMRAFLNGKIDLAQAEAVQQIIASRHQKAAQLAAQNLVGAFSQQVETMRDQLLQWLTLLEAEIDFGD-EIDSFPAEAGLQRCQTHLETLDRLLEGAQGGQMCAEGLRTVLLGPPNAGKSTLLNLILGKERALVTPIPGTTRDTLEEMTVLGGIVLHVVDTAGIRSEPGDLVEKLGIDRSRIQGAAADLILLVLDGSQPLPEMDEFVTLAENAA---TVVLLNKSDLGDAVVPEEIQRR-LPHATVTKLSLIKAEGMQTALDEITAAARRVTGQHDQVFTLTRRQLEALTRCRESLNLVRSTLEAGYSAEFVCLDLRKAIGALGEIQGIDITDEVLD 1338
            L+TI A+ATPPG GG+ I+R+SG +A  +  +LF  + + A    R+ FG+   S G  ID  L VW + PRS+TGEDVVEFH HGG  +    ++A  + G RLA PGEF+ RAFLNG+IDLAQAE++  +I++   KAA++A  +  G  S  +E +RD+++  L  +EAEID+ + E+D    +      +  +  L+ L    Q G++  +G+ TV+LG PN GKS+LLN++ G+ERA+VT IPGTTRD LE    + GI L + DTAGIR E GD++EK+GI+R+R     ADLILL+LD S+PL E D+   L +N +    +V+LNK+DL   +   EI  R   H  +T++S ++ +G++   DEI           D  F   +R  +AL      L  V +  E    ++ + LDLR+A  ALGEI G   TD++LD
Sbjct:    5 LDTIAAVATPPGFGGIGIIRISGEKAAALGAKLFNPKRKVAFSPGRMYFGDFTDSKGKHIDTGLFVWFKSPRSFTGEDVVEFHCHGGIVILQTMLRAIFDLGVRLAEPGEFSKRAFLNGRIDLAQAESISDLISASSNKAAEIARSHYRGRLSAAIEAIRDKVISVLAWIEAEIDYPEAELDLPGRDKAAATLEQQITVLEGLQSTYQEGKIYRDGVVTVILGSPNVGKSSLLNILAGEERAIVTDIPGTTRDVLEVPVTIRGIPLRLADTAGIR-ESGDVIEKIGIERARKLAEQADLILLILDTSRPLTEEDDL--LLQNVSRDNAIVVLNKTDLPAVIDAGEIAARGFQH--ITEISALQEQGIEALKDEIENLFISGKFSPDTTFISNQRHYQALVTAAGLLRQVAANWET-LPSDLLALDLRQAWQALGEITGAVWTDDLLD 445          
BLAST of mRNA_P-wetherbeei_contig18272.1.1 vs. uniprot
Match: A0A831UTW9_9BACT (tRNA modification GTPase MnmE n=2 Tax=unclassified Armatimonadetes TaxID=1042316 RepID=A0A831UTW9_9BACT)

HSP 1 Score: 308 bits (788), Expect = 4.780e-97
Identity = 196/448 (43.75%), Postives = 272/448 (60.71%), Query Frame = 1
Query:   10 VDALETIVAIATPPGEGGVAIVRLSGSRALPIQTRLFRTRSAA--ESHRLQFGELVG-SDGALIDRCLSVWMQGPRSYTGEDVVEFHTHGGSTLAALTVQACLESGARLARPGEFTMRAFLNGKIDLAQAEAVQQIIASRHQKAAQLAAQNLVGAFSQQVETMRDQLLQWLTLLEAEIDFGDEIDSFPAEAGLQRCQTHLETLDRLLEGAQGGQMCAEGLRTVLLGPPNAGKSTLLNLILGKERALVTPIPGTTRDTLEEMTVLGGIVLHVVDTAGIRSEPGDLVEKLGIDRSRIQGAAADLILLVLDGSQPLPEMDEFV--TLAENAATVVLLNKSDLGDAVVPEEIQRRLPHATVTKLSLIKAEGMQTALDEITAAARRVTGQHDQVFTLTR-RQLEALTRCRESLNLVRSTLEAGYSAEFVCLDLRKAIGALGEIQGIDITDEVL 1335
            +++ +TI +IATPPGEGG+ IVR+SG+RA PI  R+FR R A   ESHR+ FG L   + G ++DRCL +  + P SYTGEDVVEF  HG   L    ++     GAR A PGEFT RAFLNGK+DLAQAEAV  +I +R     + A     G  S++V  + + LL  L ++EA IDF +EI      + + +    ++ LD LL  A+ G++  EG+R  ++G PN GKS+LLN +LG+ERA+VTPIPGTTRD +EE   + G++  V DTAG+R E  D+VE+LG++R+R     ADLILLV D S    E DE +  +L      +++ NK DL D   P +   R     V  +S +  +GM+  L+ +  A   +TG  ++  TLT  R +E++   RESL   R++LEAG   + V +DLR A  ALG I G +  DE L
Sbjct:    4 INSADTIASIATPPGEGGIGIVRVSGARAFPIAERIFRARHAPPFESHRIYFGALYDPATGEMLDRCLLLPYRAPHSYTGEDVVEFSCHGSPYLLRRVLEVVWREGARPAEPGEFTQRAFLNGKLDLAQAEAVADLIRARTDAQHRAALALHEGRLSKEVHALTESLLGLLAMVEAHIDFSEEIGELNPTSLIPQVDALIQQLDGLLAQARRGRLIREGVRVAIVGRPNVGKSSLLNALLGEERAIVTPIPGTTRDVIEESFQVKGVLFVVADTAGLR-ESADVVERLGMERTRKAIQQADLILLVADASAGWSEADERLRQSLPPETPRLLVWNKIDLID---PAQRPTRDGEHQVW-ISALTGQGMEALLEALLEAVG-LTGVGEETLTLTHMRHIESVRTARESLLQARASLEAGMPPDIVAVDLRAAWLALGAITG-ETVDEAL 444          
BLAST of mRNA_P-wetherbeei_contig18272.1.1 vs. uniprot
Match: A0A522B293_9BACT (tRNA modification GTPase MnmE n=1 Tax=Nitrospirae bacterium TaxID=2026887 RepID=A0A522B293_9BACT)

HSP 1 Score: 307 bits (786), Expect = 1.070e-96
Identity = 188/451 (41.69%), Postives = 276/451 (61.20%), Query Frame = 1
Query:   10 VDALETIVAIATPPGEGGVAIVRLSGSRALPIQTRLF-----RTRSAAESHRLQFGELVGSDGALIDRCLSVWMQGPRSYTGEDVVEFHTHGGSTLAALTVQACLESGARLARPGEFTMRAFLNGKIDLAQAEAVQQIIASRHQKAAQLAAQNLVGAFSQQVETMRDQLLQWLTLLEAEIDFGDEIDSFPAEAGLQRCQTHLET-LDRLLEGAQGGQMCAEGLRTVLLGPPNAGKSTLLNLILGKERALVTPIPGTTRDTLEEMTVLGGIVLHVVDTAGIRSEPGDLVEKLGIDRSRIQGAAADLILLVLDGSQPLPEMD-EFVTLAENAATVVLLNKSDLGDAVVPEEIQRRLPHATVTKLSLIKAEGMQTALDEITAAARRVTGQHDQVFTLTR-RQLEALTRCRESLNLVRSTLEAGYSAEFVCLDLRKAIGALGEIQGIDITDEVLD 1338
            ++A +TI AIATPPGEGG+ I+R+SG +AL I +R+F     RT     +H L  GEL   DG  +D  L   M+ PRSYT EDVVEFH HGG  +  L ++A + SGARLA PGEFT RAFLNG++DLAQAEAV  +IA+R     ++A + L GA S+++  +R+ L++ L  +EA IDF DE  +F +   L +  T ++  + RL+  A+ G++  EG+   L+G PN GKS+L+N +   +RA+VTPIPGTTRD LEE   + GI + ++DTAG+R+   D+VE+ G+ R+    A A+L+L VLDG++PL   D + + L    AT++++NKSDL   +    ++       +   S     G++   D I  A  +   +  +   +T  R   AL R   +L  VR ++E   +AEF+ +DLR A+ A+GEI G   TD++LD
Sbjct:    1 MNAGDTICAIATPPGEGGIGIIRISGEKALDIASRVFAGAGGRTVRDYSTHTLHHGELRAPDGKRLDEVLVAVMKAPRSYTCEDVVEFHCHGGPLILRLGLEALILSGARLAEPGEFTKRAFLNGRLDLAQAEAVMDLIAARTDTGLRVALEQLRGALSEELGRLREGLVRLLVEVEAGIDFTDEDITFISPQALAQGVTAVQDRIGRLIRTAEEGRIVREGVTAALVGRPNVGKSSLMNALAKADRAIVTPIPGTTRDVLEEFVNVRGIPVRLLDTAGLRATV-DVVEREGVRRAHDALARAELVLAVLDGNEPLGAEDRQLLDLTRGKATILVVNKSDLPPRLDVHHLKGLTQEDRIVWTSATGGAGLEELRDAIRDAVLKQGPEPSEGVLITHLRHRGALERAHAALAQVRLSVERRMAAEFIAVDLRGAVNAIGEIIGETTTDDILD 450          
BLAST of mRNA_P-wetherbeei_contig18272.1.1 vs. uniprot
Match: A0A2N6E9Y3_9DELT (tRNA modification GTPase MnmE n=1 Tax=Desulfuromonas sp. TaxID=892 RepID=A0A2N6E9Y3_9DELT)

HSP 1 Score: 306 bits (783), Expect = 2.600e-96
Identity = 196/451 (43.46%), Postives = 276/451 (61.20%), Query Frame = 1
Query:   10 VDALETIVAIATPPGEGGVAIVRLSGSRALPIQTRLFRTRS---AAESHRLQFGELVGSDGALIDRCLSVWMQGPRSYTGEDVVEFHTHGGSTLAALTVQACLESGARLARPGEFTMRAFLNGKIDLAQAEAVQQIIASRHQKAAQLAAQNLVGAFSQQVETMRDQLLQWLTLLEAEIDFGDEIDSFPAEAG-LQRCQTHLET-LDRLLEGAQGGQMCAEGLRTVLLGPPNAGKSTLLNLILGKERALVTPIPGTTRDTLEEMTVLGGIVLHVVDTAGIRSEPGDLVEKLGIDRSRIQGAAADLILLVLDGSQPLPEMDEFVTLA-ENAATVVLLNKSDLGDAVVPEEIQRRLPHATVTKLSLIKAEGMQTALDEITAAARRVTGQHDQVFTLT--RRQLEALTRCRESLNLVRSTLEAGYSAEFVCLDLRKAIGALGEIQGIDITDEVLD 1338
            +D   TIVA ATP GEGGV IVRLSG  A  +  ++FR  +   + ESHRL  G +  S+G+++D  ++V M+ PRSYT EDV E H HGG  +    +   +E GAR+ARPGEFT+RAFLNG+IDLAQAEAV ++I +R + A+ +A   + G  S+ +   R++   +L  +EA IDF +E D  PA    L++   HL+  +DRLL   + G++  EGL  ++LG PN GKS+L+N++LG+ RA+VT IPGTTRDTLEE  VL G+ L +VDTAG+RS   D VE  G+ R+R + A+ADL+LLV+DGS+ + + D     A  +A  ++++NK DL    +PE     LP  TV   S+   EG+    + +        G   +  TL   RR  EAL R  + L + R+ L    S EF+ LDL + + ALGEI G    DE+L+
Sbjct:    1 MDREHTIVAPATPTGEGGVGIVRLSGEAAEGLLKKIFRPTADIGSLESHRLYHGFVQESEGSVVDEVMAVLMRKPRSYTREDVAEIHCHGGPVVMRRILDLLVEGGARIARPGEFTLRAFLNGRIDLAQAEAVVELIRARSEAASHVALGQMEGRLSRAIHGFRERTADFLAEVEAHIDFPEE-DIQPAGFDRLEKGARHLQDEMDRLLATFESGRVLREGLAVLILGRPNVGKSSLMNVLLGEARAIVTDIPGTTRDTLEESLVLHGLPLRLVDTAGVRSTT-DPVEAEGVRRARDKVASADLVLLVVDGSRQVGDEDRLALQACRDAQVLLVVNKGDLPQVPLPEAFLD-LPRVTV---SVRSGEGIAKLEETVAGRFGGDGGTEGRETTLLSDRRHREALLRASQCLGVFRAGLTGNSSPEFLALDLHETLDALGEITGETAPDEILE 445          
BLAST of mRNA_P-wetherbeei_contig18272.1.1 vs. uniprot
Match: A0A7C6MU28_9FIRM (tRNA modification GTPase MnmE n=1 Tax=Clostridiales bacterium TaxID=1898207 RepID=A0A7C6MU28_9FIRM)

HSP 1 Score: 305 bits (782), Expect = 4.530e-96
Identity = 178/452 (39.38%), Postives = 278/452 (61.50%), Query Frame = 1
Query:   22 ETIVAIATPPGEGGVAIVRLSGSRALPIQTRLFRTRSAA-----ESHRLQFGELV--GSDGALIDRCLSVWMQGPRSYTGEDVVEFHTHGGSTLAALTVQACLESGARLARPGEFTMRAFLNGKIDLAQAEAVQQIIASRHQKAAQLAAQNLVGAFSQQVETMRDQLLQWLTLLEAEIDFG-DEIDSFPAEAGLQRCQTHLETLDRLLEGAQGGQMCAEGLRTVLLGPPNAGKSTLLNLILGKERALVTPIPGTTRDTLEEMTVLGGIVLHVVDTAGIRSEPGDLVEKLGIDRSRIQGAAADLILLVLDGSQPLPEMD-EFVTLAENAATVVLLNKSDLGDAVVPEEIQRRLPHATVTKLSLIKAEGMQTALDEITAAARRVTG----QHDQVFTLTRRQLEALTRCRESLNLVRSTLEAGYSAEFVCLDLRKAIGALGEIQGIDITDEVLD 1338
            +TI AIATPPGEGG+ I+R+SG  A+ I  ++F+++        E+ +  +G +V  G  G ++D  L + M+ P SYT EDVVE   HGG       +   L++GARLA+PGEFT RAFLNG+IDLAQAEAV  II ++ + A + + + L G  S+++  +RD+LL     +EA +D+  DEIDS   +   +R +  +  +D L+E ++ G++  EGL T ++G PN GKS+LLN ++ + RA+VT IPGTTRD +EE   + GI+L +VDTAGIR E  DLVEKLG++RSR     ADLI+++ D +Q + + D E + + ++   +VL+NKSDL   +  +EI+   P A + ++S+ + +G+    + I   A+ V G      +Q+     R ++AL R  +SL      ++ G   + + +D+R A+  LGEI G  + D+++D
Sbjct:    5 DTIAAIATPPGEGGIGIIRMSGRDAVDILKKIFKSKRGIKVEDMEARKSYYGHIVKPGQGGGVVDEVLVIIMKAPYSYTKEDVVEISCHGGMVSVKEILSLILDNGARLAQPGEFTKRAFLNGRIDLAQAEAVMDIINAKTEIAHRASMKQLEGGLSRKINVIRDELLGLAAHIEALVDYPEDEIDSLEVDEVRRRMEKVINEIDGLIETSESGRIVREGLTTAIIGKPNVGKSSLLNAMVKENRAIVTEIPGTTRDVIEEYVNIKGILLRLVDTAGIR-ETEDLVEKLGVERSRKAVEDADLIIMMFDAAQQINDEDREIIRIIKDKKVIVLINKSDLPPKINEKEIEEIFPQAPIIRISVKEGKGLDELEETI---AKMVYGGRVRPENQILVTNVRHIDALKRSIKSLRAGVDAIDMGMPIDLISIDIRNALEQLGEITGDSVDDDIID 452          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18272.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X8XM07_9BURK9.690e-11346.64tRNA modification GTPase MnmE n=1 Tax=Burkholderia... [more]
A0A7C1FH55_9CHLR2.680e-10244.94tRNA modification GTPase MnmE n=1 Tax=Anaerolineae... [more]
A0A2N6F307_9DELT2.140e-9843.15tRNA modification GTPase MnmE n=1 Tax=Desulfuromon... [more]
A0A533RHD7_9DELT9.880e-9843.81tRNA modification GTPase MnmE n=1 Tax=Deltaproteob... [more]
A0A2J6J0S9_9DELT1.700e-9742.38tRNA modification GTPase MnmE n=1 Tax=Desulfuromon... [more]
A0A357R4N1_9FIRM2.330e-9742.06tRNA modification GTPase MnmE n=1 Tax=Firmicutes b... [more]
A0A831UTW9_9BACT4.780e-9743.75tRNA modification GTPase MnmE n=2 Tax=unclassified... [more]
A0A522B293_9BACT1.070e-9641.69tRNA modification GTPase MnmE n=1 Tax=Nitrospirae ... [more]
A0A2N6E9Y3_9DELT2.600e-9643.46tRNA modification GTPase MnmE n=1 Tax=Desulfuromon... [more]
A0A7C6MU28_9FIRM4.530e-9639.38tRNA modification GTPase MnmE n=1 Tax=Clostridiale... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18272contigP-wetherbeei_contig18272:27..1364 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog338963.Pcar_3142
Preferred namemnmE
PFAMsMMR_HSR1,MnmE_helical,TrmE_N
Model size1338
Max annot lvl28221|Deltaproteobacteria
KEGG rclassRC00053,RC00209,RC00870
KEGG koko:K03650
KEGG ReactionR08701
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.44e-96
EggNOG OGsCOG0486@1|root,COG0486@2|Bacteria,1MUCQ@1224|Proteobacteria,42M6T@68525|delta/epsilon subdivisions,2WIWY@28221|Deltaproteobacteria,43TPQ@69541|Desulfuromonadales
DescriptionExhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
Cds size1338
COG categoryJ
BRITEko00000,ko01000,ko03016
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186141.4824474-CDS-P-wetherbeei_contig18272:26..13641683186141.4824474-CDS-P-wetherbeei_contig18272:26..1364Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18272 27..1364 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18272.1.1prot_P-wetherbeei_contig18272.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18272 27..1364 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18272.1.1

>prot_P-wetherbeei_contig18272.1.1 ID=prot_P-wetherbeei_contig18272.1.1|Name=mRNA_P-wetherbeei_contig18272.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=446bp
RPGVDALETIVAIATPPGEGGVAIVRLSGSRALPIQTRLFRTRSAAESHR
LQFGELVGSDGALIDRCLSVWMQGPRSYTGEDVVEFHTHGGSTLAALTVQ
ACLESGARLARPGEFTMRAFLNGKIDLAQAEAVQQIIASRHQKAAQLAAQ
NLVGAFSQQVETMRDQLLQWLTLLEAEIDFGDEIDSFPAEAGLQRCQTHL
ETLDRLLEGAQGGQMCAEGLRTVLLGPPNAGKSTLLNLILGKERALVTPI
PGTTRDTLEEMTVLGGIVLHVVDTAGIRSEPGDLVEKLGIDRSRIQGAAA
DLILLVLDGSQPLPEMDEFVTLAENAATVVLLNKSDLGDAVVPEEIQRRL
PHATVTKLSLIKAEGMQTALDEITAAARRVTGQHDQVFTLTRRQLEALTR
CRESLNLVRSTLEAGYSAEFVCLDLRKAIGALGEIQGIDITDEVLD
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mRNA from alignment at P-wetherbeei_contig18272:27..1364+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18272.1.1 ID=mRNA_P-wetherbeei_contig18272.1.1|Name=mRNA_P-wetherbeei_contig18272.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1338bp|location=Sequence derived from alignment at P-wetherbeei_contig18272:27..1364+ (Phaeothamnion wetherbeei SAG_119_79)
CGACCTGGCGTAGACGCACTCGAGACGATTGTCGCGATAGCCACCCCACC TGGTGAAGGGGGGGTGGCTATTGTTCGTCTCAGCGGCAGCCGGGCTTTGC CTATCCAGACCAGGCTTTTTCGGACCCGCTCGGCGGCCGAGAGCCATCGC CTGCAATTTGGCGAGCTCGTCGGTTCTGACGGGGCCCTTATCGACCGCTG CCTGAGCGTCTGGATGCAGGGCCCTCGCAGCTACACGGGCGAGGATGTCG TCGAGTTCCACACCCACGGCGGCTCGACGCTGGCCGCTCTCACGGTGCAG GCATGCCTGGAATCTGGCGCACGCCTCGCTCGCCCCGGCGAGTTCACGAT GCGGGCCTTCCTCAACGGCAAAATCGATCTGGCCCAGGCCGAGGCCGTCC AGCAGATTATCGCTTCTCGCCACCAAAAAGCCGCCCAGCTCGCCGCACAA AATCTCGTGGGCGCCTTCTCTCAACAGGTCGAGACGATGCGAGATCAGCT TCTCCAGTGGCTCACTCTGCTCGAAGCCGAGATCGATTTTGGGGACGAAA TCGATTCTTTCCCTGCTGAAGCCGGGCTGCAGCGCTGCCAGACTCACCTC GAGACTCTGGACCGCTTGCTCGAAGGAGCGCAGGGCGGTCAGATGTGCGC GGAGGGCCTGCGCACGGTTCTCCTTGGCCCCCCCAACGCCGGCAAGTCCA CGCTTCTCAATCTGATTCTGGGTAAAGAGCGCGCTCTGGTGACTCCGATT CCGGGGACCACCCGAGATACGCTCGAGGAGATGACGGTGCTGGGCGGCAT CGTGCTCCATGTCGTAGACACCGCCGGGATTCGCAGCGAGCCCGGAGATC TGGTGGAGAAGCTGGGCATCGACCGCAGCCGTATCCAGGGGGCCGCGGCA GATCTGATTTTGCTCGTGCTCGATGGAAGCCAGCCACTCCCGGAGATGGA CGAGTTCGTGACCCTGGCTGAGAATGCCGCCACCGTGGTGCTCCTCAACA AGAGCGATCTGGGCGATGCGGTAGTTCCGGAAGAGATTCAGCGCAGACTC CCCCACGCGACTGTCACAAAACTGAGTCTGATCAAGGCCGAGGGAATGCA GACGGCCCTCGATGAGATTACGGCTGCAGCCCGCCGGGTCACGGGGCAGC ACGATCAGGTTTTCACCCTCACTCGACGCCAGCTTGAGGCCCTCACCCGT TGTCGGGAATCGCTAAATCTAGTAAGGTCTACCCTGGAGGCCGGCTACTC CGCGGAGTTTGTCTGCCTGGATCTGCGTAAAGCTATCGGAGCCCTGGGAG AAATTCAGGGTATCGACATCACCGATGAGGTCCTCGAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18272:27..1364+

>mRNA_P-wetherbeei_contig18272.1.1 ID=mRNA_P-wetherbeei_contig18272.1.1|Name=mRNA_P-wetherbeei_contig18272.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1338bp|location=Sequence derived from alignment at P-wetherbeei_contig18272:27..1364+ (Phaeothamnion wetherbeei SAG_119_79)
CGACCTGGCGTAGACGCACTCGAGACGATTGTCGCGATAGCCACCCCACC
TGGTGAAGGGGGGGTGGCTATTGTTCGTCTCAGCGGCAGCCGGGCTTTGC
CTATCCAGACCAGGCTTTTTCGGACCCGCTCGGCGGCCGAGAGCCATCGC
CTGCAATTTGGCGAGCTCGTCGGTTCTGACGGGGCCCTTATCGACCGCTG
CCTGAGCGTCTGGATGCAGGGCCCTCGCAGCTACACGGGCGAGGATGTCG
TCGAGTTCCACACCCACGGCGGCTCGACGCTGGCCGCTCTCACGGTGCAG
GCATGCCTGGAATCTGGCGCACGCCTCGCTCGCCCCGGCGAGTTCACGAT
GCGGGCCTTCCTCAACGGCAAAATCGATCTGGCCCAGGCCGAGGCCGTCC
AGCAGATTATCGCTTCTCGCCACCAAAAAGCCGCCCAGCTCGCCGCACAA
AATCTCGTGGGCGCCTTCTCTCAACAGGTCGAGACGATGCGAGATCAGCT
TCTCCAGTGGCTCACTCTGCTCGAAGCCGAGATCGATTTTGGGGACGAAA
TCGATTCTTTCCCTGCTGAAGCCGGGCTGCAGCGCTGCCAGACTCACCTC
GAGACTCTGGACCGCTTGCTCGAAGGAGCGCAGGGCGGTCAGATGTGCGC
GGAGGGCCTGCGCACGGTTCTCCTTGGCCCCCCCAACGCCGGCAAGTCCA
CGCTTCTCAATCTGATTCTGGGTAAAGAGCGCGCTCTGGTGACTCCGATT
CCGGGGACCACCCGAGATACGCTCGAGGAGATGACGGTGCTGGGCGGCAT
CGTGCTCCATGTCGTAGACACCGCCGGGATTCGCAGCGAGCCCGGAGATC
TGGTGGAGAAGCTGGGCATCGACCGCAGCCGTATCCAGGGGGCCGCGGCA
GATCTGATTTTGCTCGTGCTCGATGGAAGCCAGCCACTCCCGGAGATGGA
CGAGTTCGTGACCCTGGCTGAGAATGCCGCCACCGTGGTGCTCCTCAACA
AGAGCGATCTGGGCGATGCGGTAGTTCCGGAAGAGATTCAGCGCAGACTC
CCCCACGCGACTGTCACAAAACTGAGTCTGATCAAGGCCGAGGGAATGCA
GACGGCCCTCGATGAGATTACGGCTGCAGCCCGCCGGGTCACGGGGCAGC
ACGATCAGGTTTTCACCCTCACTCGACGCCAGCTTGAGGCCCTCACCCGT
TGTCGGGAATCGCTAAATCTAGTAAGGTCTACCCTGGAGGCCGGCTACTC
CGCGGAGTTTGTCTGCCTGGATCTGCGTAAAGCTATCGGAGCCCTGGGAG
AAATTCAGGGTATCGACATCACCGATGAGGTCCTCGAC
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