mRNA_P-wetherbeei_contig18228.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18228.1.1
Unique NamemRNA_P-wetherbeei_contig18228.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18228.1.1 vs. uniprot
Match: A0A521M741_9HYPH (GNAT family N-acetyltransferase n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521M741_9HYPH)

HSP 1 Score: 420 bits (1080), Expect = 3.690e-147
Identity = 207/250 (82.80%), Postives = 220/250 (88.00%), Query Frame = 1
Query:    1 MSRPDDLSEVRRLEELAFRGWPALESHDLAGWRQRFAGGYTKRANSINALEPHAECNPEVVATLEAPYLRRGLVPAWRLTPLAPPAVAPLLAGRGYRTIERSLLQVCPLHAGFAADAQVRISPRPSPAWIEAFCTYSPVRPQHRETMERMLAAIAAPAGFALVEEAGQPMAMAIGAVEGDHMGLFDVLVMPHARRRGLARRITESLYAWAWGHGARFAYLQVVATNEAALPLYADQGFRTVYGYEYLLPP 750
            MS  D+ +EVRRLEELAFRGWPALES D AGWR RF+ GYTKRANSIN L P A+C+PEVV+ LEAPY+  G  P WRLTPLAPPA+ PLLA RGYR IERSLLQVCPLHA FAADA V I P P+ AWIEAFC +SPV PQHRETM+RMLAAIAAPAGFA VEEAGQPMAMAIGA+EGDHMGLFDVLVMP ARRRGLARR+TESLYAWAWGHGARFAYLQVVATN AALPLYADQGFRTVYGYEYLLPP
Sbjct:    1 MSCLDNPAEVRRLEELAFRGWPALESRDFAGWRLRFSHGYTKRANSINPLGPEAQCDPEVVSALEAPYVDLGQTPTWRLTPLAPPAIRPLLAVRGYRAIERSLLQVCPLHARFAADAAVHIYPAPTAAWIEAFCLHSPVPPQHRETMQRMLAAIAAPAGFAFVEEAGQPMAMAIGAIEGDHMGLFDVLVMPAARRRGLARRVTESLYAWAWGHGARFAYLQVVATNAAALPLYADQGFRTVYGYEYLLPP 250          
BLAST of mRNA_P-wetherbeei_contig18228.1.1 vs. uniprot
Match: A0A1F3A8M8_9PROT (N-acetyltransferase domain-containing protein n=1 Tax=Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_66_14 TaxID=1797225 RepID=A0A1F3A8M8_9PROT)

HSP 1 Score: 414 bits (1064), Expect = 1.730e-144
Identity = 199/250 (79.60%), Postives = 217/250 (86.80%), Query Frame = 1
Query:    1 MSRPDDLSEVRRLEELAFRGWPALESHDLAGWRQRFAGGYTKRANSINALEPHAECNPEVVATLEAPYLRRGLVPAWRLTPLAPPAVAPLLAGRGYRTIERSLLQVCPLHAGFAADAQVRISPRPSPAWIEAFCTYSPVRPQHRETMERMLAAIAAPAGFALVEEAGQPMAMAIGAVEGDHMGLFDVLVMPHARRRGLARRITESLYAWAWGHGARFAYLQVVATNEAALPLYADQGFRTVYGYEYLLPP 750
            MSRPD+L+EVRRLEELAF+GWPALE+ DLAGWRQR + GYTKRANSINAL P A C+PE+V+ LEAPYL  G  P WRLTPLAP A+APLL  RGYR IERSLLQVCPLHAGF ADA++RI  +P+PAWI AFC +SPV  QHRETM RML AIAAPAGFA  E AG PMAMAIGAVEG+HMGLFDVLVMPHARRRGLARR+TESLYAWAWGHGARFAYLQVVATN+AALPLYA QGFRT Y YEY +PP
Sbjct:    1 MSRPDNLAEVRRLEELAFQGWPALETRDLAGWRQRLSQGYTKRANSINALGPDARCDPEIVSALEAPYLGLGQTPTWRLTPLAPAAIAPLLGARGYRAIERSLLQVCPLHAGFTADAEIRIFTKPTPAWIAAFCRHSPVPAQHRETMARMLDAIAAPAGFAFAEAAGHPMAMAIGAVEGEHMGLFDVLVMPHARRRGLARRVTESLYAWAWGHGARFAYLQVVATNQAALPLYAAQGFRTAYAYEYFVPP 250          
BLAST of mRNA_P-wetherbeei_contig18228.1.1 vs. uniprot
Match: A0A6A7LXP9_9PROT (GNAT family N-acetyltransferase n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6A7LXP9_9PROT)

HSP 1 Score: 368 bits (944), Expect = 2.020e-126
Identity = 179/251 (71.31%), Postives = 200/251 (79.68%), Query Frame = 1
Query:    1 MSRPDDLSEVRRLEELAFRGWPALESHDLAGWRQRFAGGYTKRANSINALEPHAECNPEVVATLEAPYLRRGLVPAWRLTPLAPPAVAPLLAGRGYRTIERSLLQVCPLHAGFAADAQVRISPRPSPAWIEAFCTYSPVRPQHRETMERMLAAIAAPAGFALVEEAGQPMAMAIGAVEGDHMGLFDVLVMPHARRRGLARRITESLYAWAWGHGARFAYLQVVATNEAALPLYADQGFRTVYGYEYLLPPS 753
            +S   DLS+VRRLEELAF GWPALES D+AGWR RF+G YTKRANSINAL   A+   + + +LEA Y  R  +P WRLT LAPPA   LLAGRGYR IERSLLQVC L   F    +V I P P+  WIEA CTYSPVRPQHR+TM RMLA+I AP GFA VEEAGQPMAMAIGA++GDHMGLFDVLVMP ARRRGLAR++TE+LY WAW HGARFAYLQVVA N+AA+PLYA QGFRTVY YEY +PPS
Sbjct:    2 LSSSPDLSQVRRLEELAFAGWPALESRDMAGWRLRFSGEYTKRANSINALGTDAQIGRKTLDSLEAAYRERHQLPVWRLTQLAPPATVDLLAGRGYRPIERSLLQVCQLEPAFTPSPEVTIHPEPTATWIEALCTYSPVRPQHRDTMRRMLASITAPVGFAFVEEAGQPMAMAIGAIQGDHMGLFDVLVMPQARRRGLARKVTETLYTWAWSHGARFAYLQVVAANQAAMPLYAAQGFRTVYDYEYFVPPS 252          
BLAST of mRNA_P-wetherbeei_contig18228.1.1 vs. uniprot
Match: A0A521QIT2_9HYPH (GNAT family N-acetyltransferase n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521QIT2_9HYPH)

HSP 1 Score: 367 bits (943), Expect = 2.500e-126
Identity = 183/251 (72.91%), Postives = 201/251 (80.08%), Query Frame = 1
Query:    1 MSRPDDLSEVRRLEELAFRGWPALESHDLAGWRQRFAGGYTKRANSINALEPHAECNPEVVATLEAPYLRRGLVPAWRLTPLAPPAVAPLLAGRGYRTIERSLLQVCPLHAGFAADAQVRISPRPSPAWIEAFCTYSPVRPQHRETMERMLAAIAAPAGFALVEEAGQPMAMAIGAVEGDHMGLFDVLVMPHARRRGLARRITESLYAWAWGHGARFAYLQVVATNEAALPLYADQGFRTVYGYEYLLPPS 753
            MS P  L EVRRLEELAFRGWPALES DL GWR RF+ GYTKR NSINALE +A  + E    LEAPY  RG  PAWRL+PLAP  +  LLA RGY  +ERSL+Q CPLH GFA D  V I P+P+PAWIEAFC +SPVRP+HRETMERMLAAIA P GFALV+  G+PMAMAIGAV+GDHMGLFDVLVMP ARR+GLARR+TESLYAWAW  GAR+AYLQVVA N AALPLY  QGFRTVY Y Y LPP+
Sbjct:    1 MSPPHKLDEVRRLEELAFRGWPALESRDLDGWRLRFSNGYTKRTNSINALEENASTDIEA---LEAPYRARGQRPAWRLSPLAPAVMPELLAARGYSNVERSLVQRCPLHEGFATDPVVEIQPQPTPAWIEAFCAHSPVRPEHRETMERMLAAIATPKGFALVQHEGRPMAMAIGAVDGDHMGLFDVLVMPEARRQGLARRVTESLYAWAWQQGARYAYLQVVAANAAALPLYEAQGFRTVYAYTYWLPPA 248          
BLAST of mRNA_P-wetherbeei_contig18228.1.1 vs. uniprot
Match: A0A521L2W6_9HYPH (GNAT family N-acetyltransferase (Fragment) n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521L2W6_9HYPH)

HSP 1 Score: 366 bits (940), Expect = 5.200e-126
Identity = 181/241 (75.10%), Postives = 199/241 (82.57%), Query Frame = 1
Query:   31 RRLEELAFRGWPALESHDLAGWRQRFAGGYTKRANSINALEPHAECNPEVVATLEAPYLRRGLVPAWRLTPLAPPAVAPLLAGRGYRTIERSLLQVCPLHAGFAADAQVRISPRPSPAWIEAFCTYSPVRPQHRETMERMLAAIAAPAGFALVEEAGQPMAMAIGAVEGDHMGLFDVLVMPHARRRGLARRITESLYAWAWGHGARFAYLQVVATNEAALPLYADQGFRTVYGYEYLLPPS 753
            RRLEELAFRGWPALE+ DLAGWR RF+GGYTKRANSINAL P A    E V   EA +  RGL P WRL+PLAPP +  LLA RGYR IERSL+Q CPLH GF AD +V I P P+P WIEAFCT+SPVRP+HR TMERMLAAIA PAGFA VE+ G+PMAMAIGAV+GDHMGLFDVLVMP ARR+GLARR+TESLYAWAWG GARFAYLQVV+TN AA+PLY  QGFRTVY YEY +P S
Sbjct:    1 RRLEELAFRGWPALETQDLAGWRLRFSGGYTKRANSINALGPEASTEIEAV---EAAHRARGLPPVWRLSPLAPPTMDGLLAARGYRAIERSLMQRCPLHEGFRADPEVAIHPAPTPPWIEAFCTHSPVRPEHRATMERMLAAIAQPAGFAFVEKEGRPMAMAIGAVDGDHMGLFDVLVMPEARRQGLARRVTESLYAWAWGRGARFAYLQVVSTNAAAMPLYEAQGFRTVYAYEYRIPQS 238          
BLAST of mRNA_P-wetherbeei_contig18228.1.1 vs. uniprot
Match: A0A512NGI4_9HYPH (N-acetyltransferase n=1 Tax=Reyranella soli TaxID=1230389 RepID=A0A512NGI4_9HYPH)

HSP 1 Score: 363 bits (931), Expect = 1.860e-124
Identity = 180/251 (71.71%), Postives = 206/251 (82.07%), Query Frame = 1
Query:    1 MSRPDDLSEVRRLEELAFRGWPALESHDLAGWRQRFAGGYTKRANSINALEPHAECNPEVVATLEAPYLRRGLVPAWRLTPLAPPAVAPLLAGRGYRTIERSLLQVCPLHAGFAADAQVRISPRPSPAWIEAFCTYSPVRPQHRETMERMLAAIAAPAGFALVEEAGQPMAMAIGAVEGDHMGLFDVLVMPHARRRGLARRITESLYAWAWGHGARFAYLQVVATNEAALPLYADQGFRTVYGYEYLLPPS 753
            +S   DLS+VRRLEELAF GWPALE+ D+AGWR RF+GGYTKRANSINALE  A+ + + V  LE+ Y   G +PAWRL+PLAP A+A +LA RGYR IERSL+QVCPL A F    +VRI  +P+ +WIEAF  +SPVRP+HR  M RMLAAIAAP GFA VEEAGQPMAMAIGAV GDHMGLFDVLVMP ARRRGLAR++TESLYAWAW HGARFAYLQVVATN AA+PLY  QGFRTVY YEY++PP+
Sbjct:    2 LSPSSDLSQVRRLEELAFAGWPALETRDVAGWRLRFSGGYTKRANSINALERKAQTDLKTVEGLESAYRELGQLPAWRLSPLAPAAIAEVLAARGYRAIERSLVQVCPLRA-FTPAPEVRIHAQPTESWIEAFSAHSPVRPEHRAAMRRMLAAIAAPVGFAFVEEAGQPMAMAIGAVNGDHMGLFDVLVMPQARRRGLARKVTESLYAWAWDHGARFAYLQVVATNAAAMPLYEAQGFRTVYDYEYIVPPT 251          
BLAST of mRNA_P-wetherbeei_contig18228.1.1 vs. uniprot
Match: UPI001E433BD7 (GNAT family N-acetyltransferase n=1 Tax=Reyranella aquatilis TaxID=2035356 RepID=UPI001E433BD7)

HSP 1 Score: 363 bits (931), Expect = 2.220e-124
Identity = 181/248 (72.98%), Postives = 200/248 (80.65%), Query Frame = 1
Query:   10 PDDLSEVRRLEELAFRGWPALESHDLAGWRQRFAGGYTKRANSINALEPHAECNPEVVATLEAPYLRRGLVPAWRLTPLAPPAVAPLLAGRGYRTIERSLLQVCPLHAGFAADAQVRISPRPSPAWIEAFCTYSPVRPQHRETMERMLAAIAAPAGFALVEEAGQPMAMAIGAVEGDHMGLFDVLVMPHARRRGLARRITESLYAWAWGHGARFAYLQVVATNEAALPLYADQGFRTVYGYEYLLPPS 753
            P+ L EVRRLE LAF GWPALES D+ GWR R +GGYTKRANSINAL  +   +   +  LEAPY  RGLVPAWRLTPLAP  +APLL  RGYR IERSLLQVCPLH  F AD  V +S  PSPAWIEAF T+SPVRP+HRETM+RML AIA P GFA V+  G+PMAMAIGAVEGDHMGLFDVLVMP ARR+GLA+R+TESLYAWAW  GAR AYLQVVATN AA+PLYA QGFRTVY YEY +PP+
Sbjct:   11 PETLDEVRRLEALAFNGWPALESRDVGGWRLRLSGGYTKRANSINALGSNFSTD---IGALEAPYRDRGLVPAWRLTPLAPQEIAPLLTDRGYRAIERSLLQVCPLHERFQADPAVVVSDTPSPAWIEAFVTHSPVRPEHRETMQRMLQAIAQPVGFAFVQHQGRPMAMAIGAVEGDHMGLFDVLVMPEARRQGLAQRVTESLYAWAWERGARRAYLQVVATNAAAIPLYAAQGFRTVYTYEYRVPPT 255          
BLAST of mRNA_P-wetherbeei_contig18228.1.1 vs. uniprot
Match: A0A6N6ZQJ9_9PROT (N-acetyltransferase GCN5 n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A6N6ZQJ9_9PROT)

HSP 1 Score: 353 bits (906), Expect = 1.100e-120
Identity = 177/252 (70.24%), Postives = 200/252 (79.37%), Query Frame = 1
Query:    1 MSRPDDLSEVRRLEELAFRGWPALESHDLAGWRQRFAGGYTKRANSINALEPHAECNPEVVATLEAPYLRRGLVPAWRLTPLAPPAVAPLLAGRGYRTIERSLLQVCPLHAGFAADAQVRISPRPSPAWIEAFCTYSPVRPQHRETMERMLAAIAAPAGFALVEEAGQPMAMAIGAVEGDHMGLFDVLVMPHARRRGLARRITESLYAWAWGHGARFAYLQVVATNEAALPLYADQGFRTVYGYEYLLPPSP 756
            MS   +L EVRRLE LAFRGWPALES D+ GW  RF+GGYTKRANSINALEP    + EV+   E P+  RGL P WRLTPLAP  +A LL  RGY+ IERSLLQ CPL+ GF AD  V ISP P+ AW++AF  +SPVRP+HR TME+ML +IA P GFA V   G+PMAMAIGAVEG+HMGLFDVLVMP ARR+GLARR+TESLYAWAW  GARFAYLQVVATN AA+PLYA QGFRTVY YEYL+PP+P
Sbjct:    1 MSPLKNLDEVRRLERLAFRGWPALESQDIHGWHLRFSGGYTKRANSINALEPQLPTDFEVI---EEPFRERGLPPVWRLTPLAPAGMADLLRIRGYQPIERSLLQRCPLYDGFPADPAVEISPSPASAWVDAFAAHSPVRPEHRRTMEQMLQSIAQPVGFAFVRYEGRPMAMAIGAVEGNHMGLFDVLVMPEARRQGLARRVTESLYAWAWEKGARFAYLQVVATNAAAMPLYAAQGFRTVYEYEYLVPPTP 249          
BLAST of mRNA_P-wetherbeei_contig18228.1.1 vs. uniprot
Match: A0A521R263_9HYPH (GNAT family N-acetyltransferase n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521R263_9HYPH)

HSP 1 Score: 353 bits (905), Expect = 1.570e-120
Identity = 178/249 (71.49%), Postives = 197/249 (79.12%), Query Frame = 1
Query:    1 MSRPDDLSEVRRLEELAFRGWPALESHDLAGWRQRFAGGYTKRANSINALEPHAECNPEVVATLEAPYLRRGLVPAWRLTPLAPPAVAPLLAGRGYRTIERSLLQVCPLHAGFAADAQVRISPRPSPAWIEAFCTYSPVRPQHRETMERMLAAIAAPAGFALVEEAGQPMAMAIGAVEGDHMGLFDVLVMPHARRRGLARRITESLYAWAWGHGARFAYLQVVATNEAALPLYADQGFRTVYGYEYLLP 747
            MS P +L EVRRLE LAFRGWPALES D+ GW  RF+GGYTKRANSINAL+P    + E V   EAP+  RG+ P WRLTPLAP  +A  L  RGY  IERSLLQ CPL  GF AD  V ISP PS AWIEAF  +SPV+P+HRETM+RML +IA PAGFA V+  G+PMAMAIGAVEGDHMGLFDVLVMP ARR+GLARR+TESLYAWAW  GARFAYLQVVATN AA+PLYA QGFRT Y YEYL+P
Sbjct:    1 MSSPKNLDEVRRLERLAFRGWPALESRDVQGWHLRFSGGYTKRANSINALDPLPSTDIEAV---EAPFHERGMRPVWRLTPLAPFDMAERLKTRGYEPIERSLLQRCPLQDGFRADPAVEISPSPSTAWIEAFAAHSPVKPEHRETMQRMLLSIAQPAGFAFVQHEGRPMAMAIGAVEGDHMGLFDVLVMPEARRQGLARRVTESLYAWAWVRGARFAYLQVVATNAAAMPLYAAQGFRTAYEYEYLVP 246          
BLAST of mRNA_P-wetherbeei_contig18228.1.1 vs. uniprot
Match: A0A259MN93_9PROT (N-acetyltransferase domain-containing protein n=1 Tax=Rhodospirillales bacterium 39-66-50 TaxID=1970570 RepID=A0A259MN93_9PROT)

HSP 1 Score: 349 bits (896), Expect = 3.670e-119
Identity = 176/251 (70.12%), Postives = 199/251 (79.28%), Query Frame = 1
Query:    1 MSRPDDLSEVRRLEELAFRGWPALESHDLAGWRQRFAGGYTKRANSINALEPHAECNPEVVATLEAPYLRRGLVPAWRLTPLAPPAVAPLLAGRGYRTIERSLLQVCPLHAGFAADAQVRISPRPSPAWIEAFCTYSPVRPQHRETMERMLAAIAAPAGFALVEEAGQPMAMAIGAVEGDHMGLFDVLVMPHARRRGLARRITESLYAWAWGHGARFAYLQVVATNEAALPLYADQGFRTVYGYEYLLPPS 753
            MS   +L EVRRLE LAFRGWPALE  D+ GW  RF+GGYTKRANSINAL+P A  +P++ A +EA    RG  P WRLTPLAP   A  L  RGY+ IERSLLQ CPLH GF A   V I+  P+PAW++AF TYSPV+P+HRETM+RML  IA PAGFA V+  G+PMAMAIGAVEGDHMGLFDVLVMP ARR+GLARR+TESLYAWAW  GARFAYLQVVATN AA+PLYA QGFRTVY YEYL+PP+
Sbjct:    1 MSSLKNLDEVRRLERLAFRGWPALEFQDIQGWHLRFSGGYTKRANSINALDPTA--SPDIEA-VEAAVRERGRPPVWRLTPLAPFGTADRLKARGYQPIERSLLQRCPLHDGFRAAPAVEIAASPTPAWLDAFATYSPVKPEHRETMQRMLQVIAQPAGFAFVQHEGRPMAMAIGAVEGDHMGLFDVLVMPEARRQGLARRVTESLYAWAWERGARFAYLQVVATNAAAMPLYAAQGFRTVYEYEYLIPPT 248          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18228.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A521M741_9HYPH3.690e-14782.80GNAT family N-acetyltransferase n=1 Tax=Reyranella... [more]
A0A1F3A8M8_9PROT1.730e-14479.60N-acetyltransferase domain-containing protein n=1 ... [more]
A0A6A7LXP9_9PROT2.020e-12671.31GNAT family N-acetyltransferase n=1 Tax=Rhodospiri... [more]
A0A521QIT2_9HYPH2.500e-12672.91GNAT family N-acetyltransferase n=1 Tax=Reyranella... [more]
A0A521L2W6_9HYPH5.200e-12675.10GNAT family N-acetyltransferase (Fragment) n=1 Tax... [more]
A0A512NGI4_9HYPH1.860e-12471.71N-acetyltransferase n=1 Tax=Reyranella soli TaxID=... [more]
UPI001E433BD72.220e-12472.98GNAT family N-acetyltransferase n=1 Tax=Reyranella... [more]
A0A6N6ZQJ9_9PROT1.100e-12070.24N-acetyltransferase GCN5 n=1 Tax=Rhodospirillaceae... [more]
A0A521R263_9HYPH1.570e-12071.49GNAT family N-acetyltransferase n=1 Tax=Reyranella... [more]
A0A259MN93_9PROT3.670e-11970.12N-acetyltransferase domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18228contigP-wetherbeei_contig18228:128..914 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1205680.CAKO01000004_gene3658
PFAMsAcetyltransf_1
Model size787
Max annot lvl204441|Rhodospirillales
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.79e-85
EggNOG OGsCOG0454@1|root,COG0456@2|Bacteria,1N7DW@1224|Proteobacteria,2VERR@28211|Alphaproteobacteria,2JX6B@204441|Rhodospirillales
DescriptionFR47-like protein
Cds size765
COG categoryK
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186140.0534103-CDS-P-wetherbeei_contig18228:127..8921683186140.0534103-CDS-P-wetherbeei_contig18228:127..892Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18228 128..892 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186140.069578-UTR-P-wetherbeei_contig18228:892..9141683186140.069578-UTR-P-wetherbeei_contig18228:892..914Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig18228 893..914 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18228.1.1prot_P-wetherbeei_contig18228.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18228 128..892 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18228.1.1

>prot_P-wetherbeei_contig18228.1.1 ID=prot_P-wetherbeei_contig18228.1.1|Name=mRNA_P-wetherbeei_contig18228.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=255bp
MSRPDDLSEVRRLEELAFRGWPALESHDLAGWRQRFAGGYTKRANSINAL
EPHAECNPEVVATLEAPYLRRGLVPAWRLTPLAPPAVAPLLAGRGYRTIE
RSLLQVCPLHAGFAADAQVRISPRPSPAWIEAFCTYSPVRPQHRETMERM
LAAIAAPAGFALVEEAGQPMAMAIGAVEGDHMGLFDVLVMPHARRRGLAR
RITESLYAWAWGHGARFAYLQVVATNEAALPLYADQGFRTVYGYEYLLPP
SPTA*
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mRNA from alignment at P-wetherbeei_contig18228:128..914+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18228.1.1 ID=mRNA_P-wetherbeei_contig18228.1.1|Name=mRNA_P-wetherbeei_contig18228.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=787bp|location=Sequence derived from alignment at P-wetherbeei_contig18228:128..914+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCACGTCCAGATGATCTTTCCGAGGTCCGCCGCCTGGAAGAGCTGGC CTTCAGGGGCTGGCCTGCCCTGGAGAGCCATGACCTCGCCGGCTGGCGCC AGCGCTTCGCCGGCGGCTATACGAAAAGAGCAAATTCTATCAATGCCTTG GAACCTCATGCTGAATGCAATCCTGAGGTCGTGGCAACCTTGGAGGCACC CTATCTCAGGCGCGGCCTGGTCCCAGCCTGGCGGCTGACGCCGCTGGCGC CACCGGCCGTCGCACCCCTGCTGGCCGGGCGCGGCTACCGGACGATCGAG CGCAGCCTCCTGCAGGTCTGCCCGCTCCACGCGGGCTTCGCGGCCGACGC CCAGGTCCGCATCTCGCCCCGGCCGTCGCCGGCCTGGATAGAAGCCTTCT GCACCTACAGCCCGGTGCGGCCGCAGCATCGCGAGACCATGGAGCGCATG CTGGCCGCGATCGCGGCACCCGCCGGCTTCGCCCTGGTCGAGGAAGCGGG CCAACCGATGGCCATGGCGATCGGGGCGGTCGAGGGCGACCACATGGGCC TGTTCGACGTGCTGGTGATGCCGCATGCCCGCCGCCGCGGGCTGGCACGG CGGATCACCGAAAGCCTCTACGCCTGGGCGTGGGGCCACGGCGCGCGCTT CGCCTATCTGCAGGTCGTCGCCACCAACGAAGCGGCGCTGCCGCTCTATG CCGACCAAGGCTTTCGCACGGTCTACGGCTACGAGTATCTCCTGCCGCCC TCCCCAACAGCTTGACCCCCCGGCGCCCGGCCTCACA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18228:128..914+

>mRNA_P-wetherbeei_contig18228.1.1 ID=mRNA_P-wetherbeei_contig18228.1.1|Name=mRNA_P-wetherbeei_contig18228.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=765bp|location=Sequence derived from alignment at P-wetherbeei_contig18228:128..914+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCACGTCCAGATGATCTTTCCGAGGTCCGCCGCCTGGAAGAGCTGGC
CTTCAGGGGCTGGCCTGCCCTGGAGAGCCATGACCTCGCCGGCTGGCGCC
AGCGCTTCGCCGGCGGCTATACGAAAAGAGCAAATTCTATCAATGCCTTG
GAACCTCATGCTGAATGCAATCCTGAGGTCGTGGCAACCTTGGAGGCACC
CTATCTCAGGCGCGGCCTGGTCCCAGCCTGGCGGCTGACGCCGCTGGCGC
CACCGGCCGTCGCACCCCTGCTGGCCGGGCGCGGCTACCGGACGATCGAG
CGCAGCCTCCTGCAGGTCTGCCCGCTCCACGCGGGCTTCGCGGCCGACGC
CCAGGTCCGCATCTCGCCCCGGCCGTCGCCGGCCTGGATAGAAGCCTTCT
GCACCTACAGCCCGGTGCGGCCGCAGCATCGCGAGACCATGGAGCGCATG
CTGGCCGCGATCGCGGCACCCGCCGGCTTCGCCCTGGTCGAGGAAGCGGG
CCAACCGATGGCCATGGCGATCGGGGCGGTCGAGGGCGACCACATGGGCC
TGTTCGACGTGCTGGTGATGCCGCATGCCCGCCGCCGCGGGCTGGCACGG
CGGATCACCGAAAGCCTCTACGCCTGGGCGTGGGGCCACGGCGCGCGCTT
CGCCTATCTGCAGGTCGTCGCCACCAACGAAGCGGCGCTGCCGCTCTATG
CCGACCAAGGCTTTCGCACGGTCTACGGCTACGAGTATCTCCTGCCGCCC
TCCCCAACAGCTTGA
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