mRNA_P-wetherbeei_contig1822.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1822.2.1 vs. uniprot
Match: W7TRR7_9STRA (Tf1-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRR7_9STRA) HSP 1 Score: 127 bits (318), Expect = 3.630e-30 Identity = 69/159 (43.40%), Postives = 90/159 (56.60%), Query Frame = 3
Query: 291 AALVPDVIDKVHDKVALRVRFDKHFTVADGTELDQNMTAIEPDVLLEGTKKKALYTLIMSDPDAPTPQNPTHREYLHWLVTNIPASRAKAAAGDLVVGYVGPAPPEGRHRYGLTVWLQHKDRPVMVETSPLRPGFKTRAFAAAHELEGPVGALVFYVPH 767
A ++PDVID +V +R+ +D T L + + P V LEG++ LYTL MSDPDAP+P++P+HREYLHW+V+NIP A G VV Y P PP+G HRY LTV Q P+ V R GF+TR F ++ VGA F H
Sbjct: 44 AGVIPDVIDNFDPQVQIRITYDSLLITPGATILPRQGVHM-PQVTLEGSQPGHLYTLFMSDPDAPSPEHPSHREYLHWIVSNIPGGANDIAEGTEVVPYAPPTPPQGTHRYVLTVMEQPGTNPMTVRPPAQRGGFRTRTFGKEAGMDV-VGATFFKAAH 200
BLAST of mRNA_P-wetherbeei_contig1822.2.1 vs. uniprot
Match: I1HBB0_BRADI (Uncharacterized protein n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=I1HBB0_BRADI) HSP 1 Score: 117 bits (293), Expect = 5.040e-27 Identity = 69/155 (44.52%), Postives = 94/155 (60.65%), Query Frame = 3
Query: 297 LVPDVIDKVHDKVALRVRFDKHFTVADGTELDQNMTAIEPDVLLEGTKKKALYTLIMSDPDAPTPQNPTHREYLHWLVTNIPASRAKAAAGDLVVGYVGPAPPEGRHRYGLTVWLQHKDRPV--MVETSPLRPGFKTRAFAAAHELEGPVGALVF 755
++ +V+D VA+ V + +++G + +M A +P V + G ++ LYTL+M+DPDAP+P +PT REYLHW+V NIP A GD VV Y+GPAPP G HRY L ++ Q K R V M R F TRAFAAAH+L PV + F
Sbjct: 13 VIGEVVDLFVPSVAMAVAYGPK-DISNGCHIKPSMAAAQPLVRISG-RRNDLYTLVMTDPDAPSPSDPTMREYLHWIVVNIPGG-TDATKGDTVVPYMGPAPPVGIHRYVLVLFEQ-KTRAVDGMTAAPADRAYFSTRAFAAAHDLGLPVAVVYF 163
BLAST of mRNA_P-wetherbeei_contig1822.2.1 vs. uniprot
Match: K3XS03_SETIT (Uncharacterized protein n=20 Tax=Panicoideae TaxID=147369 RepID=K3XS03_SETIT) HSP 1 Score: 113 bits (283), Expect = 1.090e-25 Identity = 68/153 (44.44%), Postives = 92/153 (60.13%), Query Frame = 3
Query: 297 LVPDVIDKVHDKVALRVRFDKHFTVADGTELDQNMTAIEPDVLLEGTKKKALYTLIMSDPDAPTPQNPTHREYLHWLVTNIPASRAKAAAGDLVVGYVGPAPPEGRHRYGLTVWLQHKDRPVMVETSPLRPGFKTRAFAAAHELEGPVGALVF 755
++ +V+D +++ V + +++G L + TA P V + G ++ LYTLIM+DPDAP+P +PT REYLHW+VTNIP A G+ VV Y+GP PP G HRY L ++ Q K R V E R F TRAFAAAHEL P + F
Sbjct: 13 VIGEVVDLFVPSISMTVAYGPK-DISNGRLLKPSATAAPPLVRISG-RRNDLYTLIMTDPDAPSPSDPTMREYLHWIVTNIPGG-TDATKGEEVVEYMGPRPPVGIHRYVLVLFEQ-KTR-VNAEAPGERANFNTRAFAAAHELGLPTAVVYF 160
BLAST of mRNA_P-wetherbeei_contig1822.2.1 vs. uniprot
Match: A0A8J5W3G2_ZIZPA (Uncharacterized protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5W3G2_ZIZPA) HSP 1 Score: 112 bits (281), Expect = 2.360e-25 Identity = 68/155 (43.87%), Postives = 91/155 (58.71%), Query Frame = 3
Query: 297 LVPDVIDKVHDKVALRVRFDKHFTVADGTELDQNMTAIEPDVLLEGTKKKALYTLIMSDPDAPTPQNPTHREYLHWLVTNIPASRAKAAAGDLVVGYVGPAPPEGRHRYGLTVWLQHKDRPVMV--ETSPLRPGFKTRAFAAAHELEGPVGALVF 755
+V DV+D A+ VRF + +G E+ ++TA P V + G + AL+TL+M+DPDAP+P PT RE+LHWLV NIP + + G++VV Y+GP PP G HRY L V Q K R + R F TRAFA H+L PV A+ F
Sbjct: 13 VVGDVVDLFVPTTAMSVRFGTR-DLTNGCEIKPSVTAAAPAVQIAG-RANALFTLVMTDPDAPSPSEPTMREWLHWLVVNIPGGK-DPSQGEVVVPYMGPKPPVGIHRYVL-VLFQQKARVAAPAPDAEAARGRFSTRAFAERHDLGLPVAAMYF 163
BLAST of mRNA_P-wetherbeei_contig1822.2.1 vs. uniprot
Match: A0A1B1LTF7_CYCRE (MFT-like protein n=1 Tax=Cycas revoluta TaxID=3396 RepID=A0A1B1LTF7_CYCRE) HSP 1 Score: 112 bits (280), Expect = 2.990e-25 Identity = 68/155 (43.87%), Postives = 89/155 (57.42%), Query Frame = 3
Query: 297 LVPDVIDKVHDKVALRVRFDKHFTVADGTELDQNMTAIEPDVLLEGTKKKALYTLIMSDPDAPTPQNPTHREYLHWLVTNIPASRAKAAAGDLVVGYVGPAPPEGRHRYGLTVWLQHKDRPVMVETSPLRP--GFKTRAFAAAHELEGPVGALVF 755
+V +VID V V + V +G E+ + T P V + T K LYTL+M+DPDAP+P P+ REY+HW+VT+IP A G V+ YVGP PP G HRY V++ K R M+ T+P +P F TRAFAA H L PV A+ F
Sbjct: 13 VVGEVIDMFVPSVEAAVYYGSK-QVTNGCEIKPSATVQRPTVQIRRTYDKTLYTLVMTDPDAPSPSEPSMREYVHWVVTDIPGG-TDACQGKEVLPYVGPRPPIGIHRY---VFVLFKQRGPMIMTTPPQPRNNFSTRAFAAHHGLGLPVAAVYF 162
BLAST of mRNA_P-wetherbeei_contig1822.2.1 vs. uniprot
Match: G1UE17_WHEAT (MFT n=24 Tax=Triticeae TaxID=147389 RepID=G1UE17_WHEAT) HSP 1 Score: 112 bits (280), Expect = 3.160e-25 Identity = 64/154 (41.56%), Postives = 92/154 (59.74%), Query Frame = 3
Query: 297 LVPDVIDKVHDKVALRVRFDKHFTVADGTELDQNMTAIEPDVLLEGTKKKALYTLIMSDPDAPTPQNPTHREYLHWLVTNIPASRAKAAAGDLVVGYVGPAPPEGRHRYGLTVWLQHKDRPVMVETSPL-RPGFKTRAFAAAHELEGPVGALVF 755
++ +V+D VA+ V + +++G + ++ A +P V + G ++ LYTL+M+DPDAP+P PT +EYLHW+V NIP A G++VV Y+GP PP G HRY L ++ Q P + SP R F TRAFAA HEL PV + F
Sbjct: 13 VIGEVVDMFVPSVAMAVAYGAR-DLSNGCHVKPSLAADQPLVRISG-RRNDLYTLVMTDPDAPSPSEPTMKEYLHWIVVNIPGG-TDATKGEVVVPYMGPRPPVGIHRYVLVLFEQKTRFPYVPAASPDDRAYFNTRAFAANHELGLPVAVVYF 163
BLAST of mRNA_P-wetherbeei_contig1822.2.1 vs. uniprot
Match: A0A804I7P6_MUSAM (Uncharacterized protein n=4 Tax=Musa TaxID=4640 RepID=A0A804I7P6_MUSAM) HSP 1 Score: 112 bits (280), Expect = 3.420e-25 Identity = 62/153 (40.52%), Postives = 87/153 (56.86%), Query Frame = 3
Query: 297 LVPDVIDKVHDKVALRVRFDKHFTVADGTELDQNMTAIEPDVLLEGTKKKALYTLIMSDPDAPTPQNPTHREYLHWLVTNIPASRAKAAAGDLVVGYVGPAPPEGRHRYGLTVWLQHKDRPVMVETSPLRPGFKTRAFAAAHELEGPVGALVF 755
+V DV+D +++ ++K T +G+EL +M A EP V + G + LYTL+M DPDAP+P NPT REYLHWLVT+IP + A G+ +V Y P P G HR+ ++ Q + + R F TR FAA + L PV A+ F
Sbjct: 11 VVGDVLDPFVKSATMKITYNKELT--NGSELKPSMVATEPRVEMRGHNTRNLYTLVMVDPDAPSPSNPTKREYLHWLVTDIPET-TNATYGNEIVSYESPRPTAGIHRFVFVLFRQSVRQTIYAPG--WRQNFSTRDFAAVYNLGDPVAAMFF 158
BLAST of mRNA_P-wetherbeei_contig1822.2.1 vs. uniprot
Match: A0A3S6CWA1_LOLPR (FT18 n=2 Tax=Lolium TaxID=4520 RepID=A0A3S6CWA1_LOLPR) HSP 1 Score: 112 bits (279), Expect = 4.450e-25 Identity = 68/155 (43.87%), Postives = 93/155 (60.00%), Query Frame = 3
Query: 297 LVPDVIDKVHDKVALRVRFDKHFTVADGTELDQNMTAIEPDVLLEGTKKKALYTLIMSDPDAPTPQNPTHREYLHWLVTNIPASRAKAAAGDLVVGYVGPAPPEGRHRYGLTVWLQHKDRPVMVETSPL--RPGFKTRAFAAAHELEGPVGALVF 755
++ +V+D VA+ V + V++G + ++ A +P V + G ++ LYTL+M+DPDAP+P +PT REYLHW+V NIP A GD+V+ Y+GP PP G HRY L V Q K R V +P RP F TRAFA HEL PV + F
Sbjct: 13 VIGEVVDLFVPSVAMAVSYGAK-DVSNGCHVKPSIAADQPLVRISG-RRNDLYTLLMTDPDAPSPSDPTMREYLHWIVMNIPGG-TDATKGDVVMPYLGPQPPVGIHRYVL-VLFQQKSRIVDGYAAPPADRPYFNTRAFAFNHELGLPVAVVYF 163
BLAST of mRNA_P-wetherbeei_contig1822.2.1 vs. uniprot
Match: A0A843UXD7_COLES (Uncharacterized protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843UXD7_COLES) HSP 1 Score: 112 bits (281), Expect = 5.790e-25 Identity = 66/158 (41.77%), Postives = 88/158 (55.70%), Query Frame = 3
Query: 291 AALVPDVIDKVHDKVALRVRFDKHFTVADGTELDQNMTAIEPDVLLEGT---KKKALYTLIMSDPDAPTPQNPTHREYLHWLVTNIPASRAKAAAGDLVVGYVGPAPPEGRHRYGLTVWLQHKDRPVMVETSPLRPGFKTRAFAAAHELEGPVGALVF 755
A ++PDVID+ + VR+ V DG ++ ++ A PDV + G LY L+MSDPDAP+P NP+ RE+LHW+V ++P + G +V Y GP PP G HRY ++ Q K + T R FKTRAFAA H L PV AL F
Sbjct: 45 ARVIPDVIDEFRPSAEVAVRYGGT-QVVDGHDIRPSIAAKPPDVRIRGAGCGSSGDLYALVMSDPDAPSPSNPSKREWLHWIVVDVPGG-SDITKGKELVPYAGPTPPIGVHRYVFAIFKQ-KGTLQGITTPSSRASFKTRAFAAEHGLGLPVAALYF 199
BLAST of mRNA_P-wetherbeei_contig1822.2.1 vs. uniprot
Match: UPI00098E5668 (protein FLOWERING LOCUS T-like n=1 Tax=Asparagus officinalis TaxID=4686 RepID=UPI00098E5668) HSP 1 Score: 111 bits (277), Expect = 9.610e-25 Identity = 67/154 (43.51%), Postives = 86/154 (55.84%), Query Frame = 3
Query: 297 LVPDVIDKVHDKVALRVRF-DKHFTVADGTELDQNMTAIEPDVLLEGTKKKALYTLIMSDPDAPTPQNPTHREYLHWLVTNIPASRAKAAAGDLVVGYVGPAPPEGRHRYGLTVWLQHKDRPVMVETSPLRPGFKTRAFAAAHELEGPVGALVF 755
++ DV+D ++RV F DK T +GT L Q A P V +EG LYT++M +PDAPTP NPTHREYLHWLVT+IP + A+ G+ +V Y P P G HR ++ Q + V R F TR FAA H+L P AL F
Sbjct: 16 IIGDVVDPFVKSASMRVVFGDKEVT--NGTRLRQIDVASPPRVTIEGRDASTLYTVVMVNPDAPTPTNPTHREYLHWLVTDIPET-VDASHGNEIVPYESPQTPTGIHRIVFVLFRQEVQQTVYAPG--WRQNFNTRDFAAIHDLGQPAAALYF 164 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1822.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1822.2.1 >prot_P-wetherbeei_contig1822.2.1 ID=prot_P-wetherbeei_contig1822.2.1|Name=mRNA_P-wetherbeei_contig1822.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=315bp MADADGERITLLHRDGHGIGSTHFRRLTAALSLLAFSAIALTGYMYMQAQback to top mRNA from alignment at P-wetherbeei_contig1822:1279..3278+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1822.2.1 ID=mRNA_P-wetherbeei_contig1822.2.1|Name=mRNA_P-wetherbeei_contig1822.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2000bp|location=Sequence derived from alignment at P-wetherbeei_contig1822:1279..3278+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1822:1279..3278+ >mRNA_P-wetherbeei_contig1822.2.1 ID=mRNA_P-wetherbeei_contig1822.2.1|Name=mRNA_P-wetherbeei_contig1822.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=945bp|location=Sequence derived from alignment at P-wetherbeei_contig1822:1279..3278+ (Phaeothamnion wetherbeei SAG_119_79)back to top |