prot_P-wetherbeei_contig1822.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1822.1.1
Unique Nameprot_P-wetherbeei_contig1822.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length91
Homology
BLAST of mRNA_P-wetherbeei_contig1822.1.1 vs. uniprot
Match: A0A526YMD8_9HYPH (tRNA dihydrouridine(20/20a) synthase DusA (Fragment) n=1 Tax=Mesorhizobium sp. TaxID=1871066 RepID=A0A526YMD8_9HYPH)

HSP 1 Score: 112 bits (279), Expect = 2.950e-30
Identity = 50/91 (54.95%), Postives = 69/91 (75.82%), Query Frame = 0
Query:    1 MLEYTDRHMRFFMRLLTQRSVMWTEMAVSNALVHAEHDALATELGFDGTEHPIVLQIGGSDVEAVRESCRIARPFGYDGFNLNCGCPSDKV 91
            M+++TDRH RF  R LT+R++++TEM V++A++H E + L   LGFDGTEHP+ LQ+GGSD + + E+ RI   FGYD  NLN GCPSD+V
Sbjct:   13 MMDWTDRHCRFLHRQLTRRALLYTEMVVADAVIHGEPERL---LGFDGTEHPVALQLGGSDPQKLAEAARIGEAFGYDEINLNVGCPSDRV 100          
BLAST of mRNA_P-wetherbeei_contig1822.1.1 vs. uniprot
Match: D7FQR5_ECTSI (FAD binding / catalytic/ tRNA dihydrouridine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQR5_ECTSI)

HSP 1 Score: 119 bits (298), Expect = 7.930e-30
Identity = 55/92 (59.78%), Postives = 70/92 (76.09%), Query Frame = 0
Query:    1 MLEYTDRHMRFFMRLLTQRSVMWTEMAVSNALVHAEHDALATELGF-DGTEHPIVLQIGGSDVEAVRESCRIARPFGYDGFNLNCGCPSDKV 91
            M+EYTDRHMR+ +RLLT R+V+WTEM  S+ ++H   D L   L + +  EHP+VLQIGGSD   VRE+CR+ARP+ YD  NLNCGCPS+KV
Sbjct:   87 MMEYTDRHMRYLLRLLTTRTVLWTEMVPSSTIIHNPDD-LGRFLDYNEEVEHPVVLQIGGSDTTDVREACRLARPYKYDAINLNCGCPSEKV 177          
BLAST of mRNA_P-wetherbeei_contig1822.1.1 vs. uniprot
Match: A0A659YPC8_9HYPH (tRNA dihydrouridine(20/20a) synthase DusA (Fragment) n=1 Tax=Mesorhizobium sp. TaxID=1871066 RepID=A0A659YPC8_9HYPH)

HSP 1 Score: 110 bits (275), Expect = 3.900e-29
Identity = 49/91 (53.85%), Postives = 68/91 (74.73%), Query Frame = 0
Query:    1 MLEYTDRHMRFFMRLLTQRSVMWTEMAVSNALVHAEHDALATELGFDGTEHPIVLQIGGSDVEAVRESCRIARPFGYDGFNLNCGCPSDKV 91
            M+++TDRH RF  R LT+R++++TEM V++A++H E + L   LGFD TEHP+ LQ+GGSD + + E+ RI   FGYD  NLN GCPSD+V
Sbjct:   12 MMDWTDRHCRFLHRQLTRRALLYTEMVVADAVIHGERERL---LGFDATEHPVALQLGGSDPQKLAEAARIGEAFGYDEINLNVGCPSDRV 99          
BLAST of mRNA_P-wetherbeei_contig1822.1.1 vs. uniprot
Match: A0A3Q8XQZ9_9HYPH (tRNA-dihydrouridine(20/20a) synthase n=1 Tax=Georhizobium profundi TaxID=2341112 RepID=A0A3Q8XQZ9_9HYPH)

HSP 1 Score: 114 bits (285), Expect = 9.260e-29
Identity = 51/91 (56.04%), Postives = 69/91 (75.82%), Query Frame = 0
Query:    1 MLEYTDRHMRFFMRLLTQRSVMWTEMAVSNALVHAEHDALATELGFDGTEHPIVLQIGGSDVEAVRESCRIARPFGYDGFNLNCGCPSDKV 91
            M+++TDRH RF  RLLT++S+++TEM V++A++H + D L   LGFD  EHP+ LQIGGSD + + E+ RI   FGYD  NLNCGCPSD+V
Sbjct:   13 MMDWTDRHCRFLHRLLTKQSLLYTEMVVADAVIHGDRDRL---LGFDPVEHPVALQIGGSDPDKLAEAARIGADFGYDEINLNCGCPSDRV 100          
BLAST of mRNA_P-wetherbeei_contig1822.1.1 vs. uniprot
Match: A0A847JCT5_9HYPH (tRNA dihydrouridine(20/20a) synthase DusA (Fragment) n=1 Tax=Phyllobacteriaceae bacterium TaxID=1871068 RepID=A0A847JCT5_9HYPH)

HSP 1 Score: 108 bits (270), Expect = 1.040e-28
Identity = 46/91 (50.55%), Postives = 67/91 (73.63%), Query Frame = 0
Query:    1 MLEYTDRHMRFFMRLLTQRSVMWTEMAVSNALVHAEHDALATELGFDGTEHPIVLQIGGSDVEAVRESCRIARPFGYDGFNLNCGCPSDKV 91
            M+E+TDRH RFF RLLT+R+ ++TEM  + A++H + + L   LG+D  EHP++ Q+GGS+   + ++ RI   FGYDG +LNCGCPSD+V
Sbjct:    1 MMEWTDRHCRFFHRLLTRRAALFTEMVTAPAVIHGDRERL---LGYDAAEHPVICQLGGSEPAQLADAARIVADFGYDGIDLNCGCPSDRV 88          
BLAST of mRNA_P-wetherbeei_contig1822.1.1 vs. uniprot
Match: A0A0Q6F3D4_9HYPH (tRNA-dihydrouridine(20/20a) synthase n=1 Tax=Aurantimonas sp. Leaf443 TaxID=1736378 RepID=A0A0Q6F3D4_9HYPH)

HSP 1 Score: 113 bits (282), Expect = 2.070e-28
Identity = 50/91 (54.95%), Postives = 70/91 (76.92%), Query Frame = 0
Query:    1 MLEYTDRHMRFFMRLLTQRSVMWTEMAVSNALVHAEHDALATELGFDGTEHPIVLQIGGSDVEAVRESCRIARPFGYDGFNLNCGCPSDKV 91
            M+++TDRH R+F R LT+R++++TEM V++A++H + D L   LGFD TEHP+ LQ+GGSD E +  +CRIA  +GYD  NLN GCPSD+V
Sbjct:    1 MIDWTDRHCRYFHRRLTRRALLFTEMVVADAVIHGDRDRL---LGFDETEHPLALQLGGSDPEKLARACRIAADYGYDEINLNVGCPSDRV 88          
BLAST of mRNA_P-wetherbeei_contig1822.1.1 vs. uniprot
Match: A0A2P9AUX9_9HYPH (tRNA-dihydrouridine(20/20a) synthase n=49 Tax=Mesorhizobium TaxID=68287 RepID=A0A2P9AUX9_9HYPH)

HSP 1 Score: 112 bits (281), Expect = 2.960e-28
Identity = 50/91 (54.95%), Postives = 69/91 (75.82%), Query Frame = 0
Query:    1 MLEYTDRHMRFFMRLLTQRSVMWTEMAVSNALVHAEHDALATELGFDGTEHPIVLQIGGSDVEAVRESCRIARPFGYDGFNLNCGCPSDKV 91
            M+++TDRH RF  R LT+R++++TEM V++A++H E + L   LGFDGTEHP+ LQ+GGSD + + E+ RI   FGYD  NLN GCPSD+V
Sbjct:    1 MMDWTDRHCRFLHRQLTRRALLYTEMVVADAVIHGERERL---LGFDGTEHPVALQLGGSDPQKLAEAARIGEAFGYDEINLNVGCPSDRV 88          
BLAST of mRNA_P-wetherbeei_contig1822.1.1 vs. uniprot
Match: A0A4V3WCS4_9DEIO (tRNA-dihydrouridine(20/20a) synthase n=2 Tax=Deinococcus TaxID=1298 RepID=A0A4V3WCS4_9DEIO)

HSP 1 Score: 113 bits (282), Expect = 3.510e-28
Identity = 50/91 (54.95%), Postives = 68/91 (74.73%), Query Frame = 0
Query:    1 MLEYTDRHMRFFMRLLTQRSVMWTEMAVSNALVHAEHDALATELGFDGTEHPIVLQIGGSDVEAVRESCRIARPFGYDGFNLNCGCPSDKV 91
            M+++TDRH R F R LT+R++++TEM  + A++H + +     LGFDGTEHP+ LQ+GGSD  A+ E  RIA+ FGYD  NLNCGCPSD+V
Sbjct:   17 MMDWTDRHCRVFHRTLTRRTLLYTEMVTTGAILHGDRER---HLGFDGTEHPVALQLGGSDPAALAECARIAQDFGYDEVNLNCGCPSDRV 104          
BLAST of mRNA_P-wetherbeei_contig1822.1.1 vs. uniprot
Match: UPI0016615537 (tRNA dihydrouridine(20/20a) synthase DusA n=1 Tax=Pseudaminobacter soli TaxID=2831468 RepID=UPI0016615537)

HSP 1 Score: 112 bits (281), Expect = 3.840e-28
Identity = 51/91 (56.04%), Postives = 67/91 (73.63%), Query Frame = 0
Query:    1 MLEYTDRHMRFFMRLLTQRSVMWTEMAVSNALVHAEHDALATELGFDGTEHPIVLQIGGSDVEAVRESCRIARPFGYDGFNLNCGCPSDKV 91
            M+++TDRH RFF R LTQR++++TEM V++A +H + D L   LGFD  EHP+ LQ+GGSD   + E+ RI   FGYD  NLNCGCPSD+V
Sbjct:   18 MMDWTDRHCRFFHRQLTQRALLYTEMIVADAAMHGDRDRL---LGFDPVEHPVALQLGGSDPAKLAEAARIGEAFGYDEINLNCGCPSDRV 105          
BLAST of mRNA_P-wetherbeei_contig1822.1.1 vs. uniprot
Match: A0A1I6MD14_9RHOB (tRNA-dihydrouridine(20/20a) synthase n=1 Tax=Yoonia litorea TaxID=1123755 RepID=A0A1I6MD14_9RHOB)

HSP 1 Score: 112 bits (280), Expect = 3.860e-28
Identity = 48/91 (52.75%), Postives = 68/91 (74.73%), Query Frame = 0
Query:    1 MLEYTDRHMRFFMRLLTQRSVMWTEMAVSNALVHAEHDALATELGFDGTEHPIVLQIGGSDVEAVRESCRIARPFGYDGFNLNCGCPSDKV 91
            M+++TDRH R+F RL+TQ+++++TEM  + A++H + D L   LGFD  EHP+ +Q+GGSD   + E+ RIA  FGYD  NLNCGCPSD+V
Sbjct:    1 MMDWTDRHCRYFHRLMTQKTLLYTEMVTAPAIIHGDRDRL---LGFDAAEHPVAIQLGGSDPAQLAEAARIAEGFGYDEVNLNCGCPSDRV 88          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1822.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A526YMD8_9HYPH2.950e-3054.95tRNA dihydrouridine(20/20a) synthase DusA (Fragmen... [more]
D7FQR5_ECTSI7.930e-3059.78FAD binding / catalytic/ tRNA dihydrouridine synth... [more]
A0A659YPC8_9HYPH3.900e-2953.85tRNA dihydrouridine(20/20a) synthase DusA (Fragmen... [more]
A0A3Q8XQZ9_9HYPH9.260e-2956.04tRNA-dihydrouridine(20/20a) synthase n=1 Tax=Georh... [more]
A0A847JCT5_9HYPH1.040e-2850.55tRNA dihydrouridine(20/20a) synthase DusA (Fragmen... [more]
A0A0Q6F3D4_9HYPH2.070e-2854.95tRNA-dihydrouridine(20/20a) synthase n=1 Tax=Auran... [more]
A0A2P9AUX9_9HYPH2.960e-2854.95tRNA-dihydrouridine(20/20a) synthase n=49 Tax=Meso... [more]
A0A4V3WCS4_9DEIO3.510e-2854.95tRNA-dihydrouridine(20/20a) synthase n=2 Tax=Deino... [more]
UPI00166155373.840e-2856.04tRNA dihydrouridine(20/20a) synthase DusA n=1 Tax=... [more]
A0A1I6MD14_9RHOB3.860e-2852.75tRNA-dihydrouridine(20/20a) synthase n=1 Tax=Yooni... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035587DUS-like, FMN-binding domainPFAMPF01207Duscoord: 1..91
e-value: 1.9E-16
score: 60.0
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70Aldolase class Icoord: 1..91
e-value: 5.2E-23
score: 83.7
NoneNo IPR availablePIRSRPIRSR006621-1PIRSR006621-1coord: 1..91
e-value: 1.1E-23
score: 81.6
NoneNo IPR availablePANTHERPTHR42907:SF1FMN-LINKED OXIDOREDUCTASES SUPERFAMILY PROTEINcoord: 1..91
NoneNo IPR availableSUPERFAMILY51395FMN-linked oxidoreductasescoord: 1..91
IPR004653tRNA-dihydrouridine(20/20a) synthasePANTHERPTHR42907FMN-LINKED OXIDOREDUCTASES SUPERFAMILY PROTEINcoord: 1..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1822contigP-wetherbeei_contig1822:141..733 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1822.1.1mRNA_P-wetherbeei_contig1822.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1822 141..754 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1822.1.1 ID=prot_P-wetherbeei_contig1822.1.1|Name=mRNA_P-wetherbeei_contig1822.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=91bp
MLEYTDRHMRFFMRLLTQRSVMWTEMAVSNALVHAEHDALATELGFDGTE
HPIVLQIGGSDVEAVRESCRIARPFGYDGFNLNCGCPSDKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035587DUS-like_FMN-bd
IPR013785Aldolase_TIM
IPR004653DusA