mRNA_P-wetherbeei_contig18207.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18207.1.1
Unique NamemRNA_P-wetherbeei_contig18207.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18207.1.1 vs. uniprot
Match: A0A3B3ZKF1_9GOBI (Zgc:122979 n=1 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=A0A3B3ZKF1_9GOBI)

HSP 1 Score: 57.8 bits (138), Expect = 1.340e-7
Identity = 25/43 (58.14%), Postives = 37/43 (86.05%), Query Frame = 3
Query:  603 VKRQYKKLALKWHPDKSSDAEAKGKFQLISDAYSRITDPEREN 731
            +K+ Y+KLALK+HPDK+SDAEA+ KF+ I++AY  +TDP++ N
Sbjct:   22 IKKAYRKLALKFHPDKNSDAEAEDKFKEIAEAYEILTDPKKRN 64          
BLAST of mRNA_P-wetherbeei_contig18207.1.1 vs. uniprot
Match: A0A3B4WQ11_SERLL (J domain-containing protein n=1 Tax=Seriola lalandi dorsalis TaxID=1841481 RepID=A0A3B4WQ11_SERLL)

HSP 1 Score: 57.0 bits (136), Expect = 2.980e-7
Identity = 29/67 (43.28%), Postives = 46/67 (68.66%), Query Frame = 3
Query:  525 LSSDEALEILGLTELCQDGGELNVKIVKRQYKKLALKWHPDKSSDAEAKGKFQLISDAYSRITDPER 725
            LS  +  +ILG+        E N   +K+ Y+K+ALK+HPDK+SDA+A+ KF+ I++AY  +TDP++
Sbjct:    8 LSRKDFYKILGVAP------ESNEDEIKKAYRKMALKFHPDKNSDADAEDKFKEIAEAYEILTDPKK 68          
BLAST of mRNA_P-wetherbeei_contig18207.1.1 vs. uniprot
Match: A0A7S4DE88_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DE88_HETAK)

HSP 1 Score: 58.2 bits (139), Expect = 3.170e-7
Identity = 32/74 (43.24%), Postives = 54/74 (72.97%), Query Frame = 3
Query:  525 LSSDEALEILGLTELCQDGGELNVKIVKRQYKKLALKWHPDKSSD-AEAKGKFQLISDAYSRITDPERENEGED 743
            +  +EA EILG+    +DG  ++ + +K+ Y+KLAL++HPDK+ D   AK +FQ IS+AY+R+T+P+  ++G+D
Sbjct:   40 MKLEEAQEILGV----EDG--VSEEDIKKAYRKLALQYHPDKNKDNPNAKERFQDISEAYNRLTNPDEYSDGDD 107          
BLAST of mRNA_P-wetherbeei_contig18207.1.1 vs. uniprot
Match: A0A3B3ZHU6_9GOBI (Zgc:122979 n=1 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=A0A3B3ZHU6_9GOBI)

HSP 1 Score: 58.9 bits (141), Expect = 8.810e-7
Identity = 34/79 (43.04%), Postives = 49/79 (62.03%), Query Frame = 3
Query:  528 SSDEALEILGLTELCQDGGELNVKIVKRQYKKLALKWHPDKSSDAEAKGKFQLISDAYSRITDPEREN-------EGED 743
            S +    +L L  +  D  E  +K   + Y+KLALK+HPDK+SDAEA+ KF+ I++AY  +TDP++ N       EGED
Sbjct:    2 SKETQYNLLPLLGVSPDSNEDEIK---KAYRKLALKFHPDKNSDAEAEDKFKEIAEAYEILTDPKKRNIYDQFGEEGED 77          
BLAST of mRNA_P-wetherbeei_contig18207.1.1 vs. uniprot
Match: A0A6C0LEK0_9ZZZZ (J domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0LEK0_9ZZZZ)

HSP 1 Score: 59.3 bits (142), Expect = 1.410e-6
Identity = 33/64 (51.56%), Postives = 43/64 (67.19%), Query Frame = 3
Query:  546 EILGLTELCQDGGELNVKIVKRQYKKLALKWHPDKSSDAEAKGKFQLISDAYSRITDPE-RENE 734
            EILGL          ++  VK+ YKKLA+KWHPDK+S  EA  KF+ I++AYS+IT+P   ENE
Sbjct:    5 EILGLDSTA------SIDEVKKAYKKLAMKWHPDKNSSPEATEKFKQITEAYSKITNPNANENE 62          
BLAST of mRNA_P-wetherbeei_contig18207.1.1 vs. uniprot
Match: UPI001595BDF0 (DnaJ domain-containing protein n=1 Tax=Novosphingobium sp. B 225 TaxID=1961849 RepID=UPI001595BDF0)

HSP 1 Score: 55.1 bits (131), Expect = 1.460e-6
Identity = 27/61 (44.26%), Postives = 42/61 (68.85%), Query Frame = 3
Query:  546 EILGLTELCQDGGELNVKIVKRQYKKLALKWHPDKS-SDAEAKGKFQLISDAYSRITDPER 725
            E+L +T    DG      ++K  Y+KLA+KWHPD++  DAEA+G+F+ IS+AY  + DP++
Sbjct:    9 ELLEVTRDADDG------VLKSSYRKLAMKWHPDRNPGDAEAEGRFKSISEAYECLKDPQK 63          
BLAST of mRNA_P-wetherbeei_contig18207.1.1 vs. uniprot
Match: A0A8B8BC67_CRAVI (dnaJ homolog subfamily B member 9-like isoform X2 n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8BC67_CRAVI)

HSP 1 Score: 57.8 bits (138), Expect = 2.060e-6
Identity = 28/70 (40.00%), Postives = 45/70 (64.29%), Query Frame = 3
Query:  516 NMGLSSDEALEILGLTELCQDGGELNVKIVKRQYKKLALKWHPDKSSDAEAKGKFQLISDAYSRITDPER 725
            N+ L+  +  EILG+ +   D      K +KR ++KLA+K+HPDK+ D +A+ KF  I+ AY  ++DPE+
Sbjct:   19 NLSLAKKDFYEILGVKKTATD------KQIKRAFRKLAVKYHPDKNKDKDAQAKFLEIAKAYETLSDPEK 82          
BLAST of mRNA_P-wetherbeei_contig18207.1.1 vs. uniprot
Match: UPI001425AA4D (heat shock protein sti1 homolog n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425AA4D)

HSP 1 Score: 59.3 bits (142), Expect = 2.080e-6
Identity = 34/75 (45.33%), Postives = 49/75 (65.33%), Query Frame = 3
Query:  519 MGLSSDEALEILGLTELCQDGGELNVKIVKRQYKKLALKWHPDKSSDAE-AKGKFQLISDAYSRITDPERENEGE 740
            MGLS++EA +ILG+    ++      + V+  YKKLALKWHPDK S+++ A  KFQ +S AY R+T  E ++  E
Sbjct:    1 MGLSTEEAYDILGIPRGSEE------EEVRAAYKKLALKWHPDKHSNSDSATKKFQEVSAAYKRLTSDEPDDGSE 69          
BLAST of mRNA_P-wetherbeei_contig18207.1.1 vs. uniprot
Match: A0A3B3ZJH0_9GOBI (Zgc:122979 n=4 Tax=Oxudercinae TaxID=497678 RepID=A0A3B3ZJH0_9GOBI)

HSP 1 Score: 58.2 bits (139), Expect = 3.390e-6
Identity = 29/54 (53.70%), Postives = 41/54 (75.93%), Query Frame = 3
Query:  603 VKRQYKKLALKWHPDKSSDAEAKGKFQLISDAYSRITDPEREN-------EGED 743
            +K+ Y+KLALK+HPDK+SDAEA+ KF+ I++AY  +TDP++ N       EGED
Sbjct:   66 IKKAYRKLALKFHPDKNSDAEAEDKFKEIAEAYEILTDPKKRNIYDQFGEEGED 119          
BLAST of mRNA_P-wetherbeei_contig18207.1.1 vs. uniprot
Match: A0A8B8BCR7_CRAVI (dnaJ homolog subfamily B member 9-like isoform X1 n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8BCR7_CRAVI)

HSP 1 Score: 57.8 bits (138), Expect = 3.400e-6
Identity = 28/70 (40.00%), Postives = 45/70 (64.29%), Query Frame = 3
Query:  516 NMGLSSDEALEILGLTELCQDGGELNVKIVKRQYKKLALKWHPDKSSDAEAKGKFQLISDAYSRITDPER 725
            N+ L+  +  EILG+ +   D      K +KR ++KLA+K+HPDK+ D +A+ KF  I+ AY  ++DPE+
Sbjct:   19 NLSLAKKDFYEILGVKKTATD------KQIKRAFRKLAVKYHPDKNKDKDAQAKFLEIAKAYETLSDPEK 82          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18207.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3B3ZKF1_9GOBI1.340e-758.14Zgc:122979 n=1 Tax=Periophthalmus magnuspinnatus T... [more]
A0A3B4WQ11_SERLL2.980e-743.28J domain-containing protein n=1 Tax=Seriola laland... [more]
A0A7S4DE88_HETAK3.170e-743.24Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A3B3ZHU6_9GOBI8.810e-743.04Zgc:122979 n=1 Tax=Periophthalmus magnuspinnatus T... [more]
A0A6C0LEK0_9ZZZZ1.410e-651.56J domain-containing protein n=1 Tax=viral metageno... [more]
UPI001595BDF01.460e-644.26DnaJ domain-containing protein n=1 Tax=Novosphingo... [more]
A0A8B8BC67_CRAVI2.060e-640.00dnaJ homolog subfamily B member 9-like isoform X2 ... [more]
UPI001425AA4D2.080e-645.33heat shock protein sti1 homolog n=1 Tax=Anneissia ... [more]
A0A3B3ZJH0_9GOBI3.390e-653.70Zgc:122979 n=4 Tax=Oxudercinae TaxID=497678 RepID=... [more]
A0A8B8BCR7_CRAVI3.400e-640.00dnaJ homolog subfamily B member 9-like isoform X1 ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18207contigP-wetherbeei_contig18207:157..1241 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog7955.ENSDARP00000093335
Preferred nameDNAJB5
PFAMsDnaJ,DnaJ_C
Model size779
Max annot lvl33208|Metazoa
KEGG koko:K09507,ko:K09510,ko:K09511
KEGG Pathwayko04141,ko05164,map04141,map05164
Hectar predicted targeting categoryother localisation
GOsGO:0000122,GO:0002682,GO:0002684,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006355,GO:0006357,GO:0006457,GO:0006950,GO:0006986,GO:0008134,GO:0008150,GO:0008593,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0010646,GO:0010648,GO:0019219,GO:0019222,GO:0023051,GO:0023057,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031647,GO:0035966,GO:0042221,GO:0042689,GO:0042691,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0045595,GO:0045597,GO:0045610,GO:0045612,GO:0045746,GO:0045892,GO:0045934,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050793,GO:0050794,GO:0050821,GO:0050896,GO:0051082,GO:0051087,GO:0051094,GO:0051171,GO:0051172,GO:0051239,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141
Exons3
Evalue3.48e-08
EggNOG OGsCOG0484@1|root,KOG0714@2759|Eukaryota,38BTN@33154|Opisthokonta,3BCDV@33208|Metazoa,3CTA3@33213|Bilateria,4846N@7711|Chordata,48VYF@7742|Vertebrata,49QYB@7898|Actinopterygii
DescriptiondnaJ homolog subfamily B member 5-like
Cds size261
COG categoryO
BRITEko00000,ko00001,ko03110
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186139.3180273-CDS-P-wetherbeei_contig18207:156..2031683186139.3180273-CDS-P-wetherbeei_contig18207:156..203Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18207 157..203 -
1683186139.3292866-CDS-P-wetherbeei_contig18207:346..4221683186139.3292866-CDS-P-wetherbeei_contig18207:346..422Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18207 347..422 -
1683186139.3415575-CDS-P-wetherbeei_contig18207:585..7231683186139.3415575-CDS-P-wetherbeei_contig18207:585..723Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18207 586..723 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186139.3496854-UTR-P-wetherbeei_contig18207:723..12411683186139.3496854-UTR-P-wetherbeei_contig18207:723..1241Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig18207 724..1241 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18207.1.1prot_P-wetherbeei_contig18207.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18207 157..723 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18207.1.1

>prot_P-wetherbeei_contig18207.1.1 ID=prot_P-wetherbeei_contig18207.1.1|Name=mRNA_P-wetherbeei_contig18207.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=87bp
MGLSSDEALEILGLTELCQDGGELNVKIVKRQYKKLALKWHPDKSSDAEA
KGKFQLISDAYSRITDPERENEGEDDDDEEDDCCPQ*
back to top

mRNA from alignment at P-wetherbeei_contig18207:157..1241-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18207.1.1 ID=mRNA_P-wetherbeei_contig18207.1.1|Name=mRNA_P-wetherbeei_contig18207.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1085bp|location=Sequence derived from alignment at P-wetherbeei_contig18207:157..1241- (Phaeothamnion wetherbeei SAG_119_79)
GTGTGGCCAACACGTCACCCGCGCGACGGCTTCGACTTCAGCGCCTTTCA CACATTCCAGGCGTGGACATCCTGTGACATTGAGAAAGGTATGGTACCTT CAGTAGGGTAAGAAGTAATCCGCGAGAAGAGCGCCTTCCATTCTCCTCTC ACTGGTGAAAAAGCCGCGATAGCGCCAGACTAAGTGGGTGGTACTTGGAT ATGCTGGCGCTTGAACGAAAATATCCACAGTAACACCCTTACATCAATGA AAACAGCTCCTTTCCCTGATGCATGTGCATGTTCTCATTCAGCACGTGTT AACGGCTTCATCGAATCACTGTGTTTTAGTTCAGTTTTGAGGTGAAAGAC CATCAGGCTTTCTTGCGGGCTTTCTCCTATTTTAATGAGTACGAGAAGCG TGCGCTTCCCCCAACGTTCACTAGTCCTCTCTTCGTGGTCACTCCATAGA GTCCACTTTGCCGACATAAACCAAAACGTGTCCCTTCTTACCAAGACGGC AAACCTCGGTAGTAAAACATGGGGCTGTCGTCGGACGAGGCTTTGGAGAT CCTCGGATTGACCGAATTGTGCCAGGATGGCGGCGAACTCAACGTCAAGA TAGTAAAACGCCAGTACAAGAAGCTAGCTCTGAAATGGCATCCTGATAAG AGCTCGGTGCGTCGATACCTTTTCACCTCTTTCAAATTCTGTTGGCAGTC CTTCGTCCTTCCTTGCGTGACTCTTTCGCCTTTGAGAGCTTTTCCTATCG TAAGTACTTTTCGAGGTATCGCGCCCTGAACCGTTGGTCCCTTCCTGGCC GTGCGAAACATTCGTACAGGATGCGGAAGCCAAGGGCAAATTCCAACTCA TTTCAGACGCCTACTCGCGTATCACCGACCCTGAGCGCGAGAACGGTGAG AAATGCGGTTCTTTGCGTGCGAAAGTTGCTCTTTGTTGTGTGTCGGAACT ATTTTCAACGGCGAACCTGATCTCTCTTTTCTGTGCACTTACCTTTTGAC AATCTTTATCCCCATATTCCTCCTCTATTATTGATCAGAGGGCGAGGATG ATGACGATGAGGAGGATGACTGCTGCCCGCAGTAA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig18207:157..1241-

>mRNA_P-wetherbeei_contig18207.1.1 ID=mRNA_P-wetherbeei_contig18207.1.1|Name=mRNA_P-wetherbeei_contig18207.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=261bp|location=Sequence derived from alignment at P-wetherbeei_contig18207:157..1241- (Phaeothamnion wetherbeei SAG_119_79)
ATGGGGCTGTCGTCGGACGAGGCTTTGGAGATCCTCGGATTGACCGAATT
GTGCCAGGATGGCGGCGAACTCAACGTCAAGATAGTAAAACGCCAGTACA
AGAAGCTAGCTCTGAAATGGCATCCTGATAAGAGCTCGGATGCGGAAGCC
AAGGGCAAATTCCAACTCATTTCAGACGCCTACTCGCGTATCACCGACCC
TGAGCGCGAGAACGAGGGCGAGGATGATGACGATGAGGAGGATGACTGCT
GCCCGCAGTAA
back to top