mRNA_P-wetherbeei_contig18200.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18200.1.1
Unique NamemRNA_P-wetherbeei_contig18200.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18200.1.1 vs. uniprot
Match: A0A6M5YT37_9BACT (Uncharacterized protein n=1 Tax=Frigoriglobus tundricola TaxID=2774151 RepID=A0A6M5YT37_9BACT)

HSP 1 Score: 133 bits (334), Expect = 3.150e-37
Identity = 67/76 (88.16%), Postives = 69/76 (90.79%), Query Frame = 1
Query:   28 GCGGQPPRSVDHAEVTGKVLLQGKPVPGGQVSFVAVTGGFAASGNIDENGNYQIKAPVGEVKITVNNTALQGRKGA 255
            G  GQPPRSVDHAEV+GKVLLQGKPVPGGQVSFVAV GGFAASGNIDENG YQIKAPVGEVKITV N+ LQ RKGA
Sbjct:   24 GLRGQPPRSVDHAEVSGKVLLQGKPVPGGQVSFVAVNGGFAASGNIDENGIYQIKAPVGEVKITVTNSMLQARKGA 99          
BLAST of mRNA_P-wetherbeei_contig18200.1.1 vs. uniprot
Match: A0A354GZL7_9BACT (Uncharacterized protein n=1 Tax=Planctomycetales bacterium TaxID=2053591 RepID=A0A354GZL7_9BACT)

HSP 1 Score: 95.5 bits (236), Expect = 3.150e-23
Identity = 44/66 (66.67%), Postives = 58/66 (87.88%), Query Frame = 1
Query:   55 VDHAEVTGKVLLQGKPVPGGQVSFVAVTGGFAASGNIDENGNYQIKAPVGEVKITVNNTALQGRKG 252
            ++HA+V+GKVL QGKP+PGGQV+FV V GGFA+SG I ENGNYQIK+PVG+V+I+V+N  LQ ++G
Sbjct:    1 MEHADVSGKVLFQGKPLPGGQVTFVVVKGGFASSGPIGENGNYQIKSPVGDVEISVDNRMLQQQRG 66          
BLAST of mRNA_P-wetherbeei_contig18200.1.1 vs. uniprot
Match: A0A7V3RQU6_9BACT (Uncharacterized protein n=1 Tax=Gemmataceae bacterium TaxID=2052164 RepID=A0A7V3RQU6_9BACT)

HSP 1 Score: 85.5 bits (210), Expect = 2.870e-18
Identity = 58/140 (41.43%), Postives = 80/140 (57.14%), Query Frame = 1
Query:   28 GCGGQPPRSVDHAEVTGKVLLQGKPVPGGQVSFVAVTGGFAASGNIDENGNYQIKAPVGEVKITVNNTALQGRKGAGGKGAAGPKQLPHPKQSGAEEPNAKTQ-----WVSIPSRYSNADTTDLKYTVTPGPQTHDINLS 432
            GCG +  + +  AEV+GKV  QGKP+PGG V FV  +G    S     +G+Y+++APVGEVKI V+N  L      GG+    P  L   K+  +  P    Q     +V +PS YS+ +++ LKYTV  G QT+DI LS
Sbjct:   19 GCG-RVEKKIQQAEVSGKVYYQGKPLPGGIVKFVNSSGYIGISVIDPADGSYKLEAPVGEVKIAVDNRMLN----TGGRQRP-PVDLSAVKRERSNRPGGGGQVITGTFVPLPSHYSDPESSGLKYTVKKGAQTYDIELS 152          
BLAST of mRNA_P-wetherbeei_contig18200.1.1 vs. uniprot
Match: A0A538S1T7_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A538S1T7_9BACT)

HSP 1 Score: 80.1 bits (196), Expect = 3.520e-16
Identity = 61/165 (36.97%), Postives = 85/165 (51.52%), Query Frame = 1
Query:    1 LLALLAAVAGCGGQPPRSVDHAEVTGKVLLQGKPVPGGQVSFVAVTGGF-AASGNIDENGNYQIKAPVGEVKITVNNTALQGRKGAGGKGAAGPKQLPH---------------------PKQSGAEEPNAKTQWVSIPSRYSNADTTDLKYTVTPGPQTHDINL 429
            LL L+  +AGCG         A+V+G+VL    P+PGG+++F+ V     A S  IDE GNYQ+  PVG+V+I V+N  L+      G  +AG  QLP                      P ++  E P  K  +V IP RY + +T+DL +TV  G QTH+I L
Sbjct:    9 LLLLVPILAGCGSA------QAKVSGQVLYNDAPLPGGRLTFLPVNPEQNAVSAEIDEQGNYQVVLPVGDVQIIVDNRELE----PSGPPSAGLPQLPPDIKPDAMRVLGNAQKSQSRSVPAENAPERPPGK--YVQIPRRYYDVETSDLIFTVQSGSQTHNIEL 161          
BLAST of mRNA_P-wetherbeei_contig18200.1.1 vs. uniprot
Match: A0A7V3VYQ5_9BACT (Uncharacterized protein n=1 Tax=Gemmataceae bacterium TaxID=2052164 RepID=A0A7V3VYQ5_9BACT)

HSP 1 Score: 79.0 bits (193), Expect = 6.610e-16
Identity = 56/145 (38.62%), Postives = 75/145 (51.72%), Query Frame = 1
Query:   10 LLAAVAGCGGQPPRSVDHAEVTGKVLLQGKPVPGGQVSFVAVTGGFAASGN----IDENGNYQI-KAPVGEVKITVNNTALQGRKGAGGKGAAGPKQLPHPKQSGAEEPNAKTQWVSIPSRYSNADTTDLKYTVTPGPQTHDINL 429
            LLA   GCGG         +V+G V  Q KP+PGG ++F  VT     +      I ++G Y + K P+G+VKITV       ++    KG   PK+LP P              V++P +Y + + TDLKYTVTPG QTHDI L
Sbjct:   21 LLAVAVGCGGN-----KTGDVSGIVTFQAKPMPGGFINFYTVTADGKITNQKSSLIGDDGTYSVTKVPIGDVKITVQAPPGALQENMTEKGGM-PKRLPPP--------------VNLPLQYQSVEQTDLKYTVTPGKQTHDIEL 145          
BLAST of mRNA_P-wetherbeei_contig18200.1.1 vs. uniprot
Match: A0A177PV00_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium SCGC AG-212-D15 TaxID=1799653 RepID=A0A177PV00_9PLAN)

HSP 1 Score: 73.6 bits (179), Expect = 1.030e-13
Identity = 51/153 (33.33%), Postives = 80/153 (52.29%), Query Frame = 1
Query:   10 LLAAVAGCGGQPPRSVDHAEVTGKVLLQGKPVPGGQVSFVAVTG-GFAASGNIDENGNYQIKAPVGEVKITVNNTALQGRKGAGGKGAAGPKQLPHPKQSGAE------------EPNAKTQWVSIPSRYSNADTTDLKYTVTPGPQTHDINL 429
            LL  V GCG +         V+G+VLL G+P+PGG+++F A      + +  +DE+G Y+   PVG+V ++V+N  LQ R        + P+ +P P    A+               A  ++V+IP  Y +  T+ L +TV+ GPQTHD+ L
Sbjct:   13 LLVLVVGCGAR------EGTVSGRVLLNGEPLPGGRITFRAADPYKNSVNAEVDEDGTYEAVLPVGDVAVSVDNRDLQPRPNV----VSLPRDVPLPDDVRAKLAVSRRPAAAPVSTKAGGRYVAIPPAYYDMTTSGLGFTVSGGPQTHDLRL 155          
BLAST of mRNA_P-wetherbeei_contig18200.1.1 vs. uniprot
Match: A0A5C5ZHR1_9BACT (Uncharacterized protein n=1 Tax=Pseudobythopirellula maris TaxID=2527991 RepID=A0A5C5ZHR1_9BACT)

HSP 1 Score: 60.1 bits (144), Expect = 1.320e-8
Identity = 53/151 (35.10%), Postives = 66/151 (43.71%), Query Frame = 1
Query:    1 LLALLAAVAGCGGQPPRSVDHAEVTGKVLLQGKPVPGGQVSFVAVTGGFAASGNIDENGNYQIKA------PVGEVKITVNNTALQGRKGAGGKGAAGPKQLPHPKQSGAEEPNAKTQWVSIPSRYSNADTTDLKYTVTPGPQTHDINLSS 435
            LLAL+   AGCGG        A V G V L G+P+P G VSF   + G  A   ID++G YQI+       P GE  +TV                A  K       SG   P  +   +  P RY N D + L YTV PG    D+ L+S
Sbjct:   21 LLALM--TAGCGGP-----YDATVYGAVTLDGQPLPSGTVSFFPTSDGPTAYSRIDDSGMYQIRTGREKGLPPGEYAVTV---------------VAREKPTVDQSNSGGPPPAGR---MLTPQRYRNRDQSGLVYTVEPGANQIDLELTS 146          
BLAST of mRNA_P-wetherbeei_contig18200.1.1 vs. uniprot
Match: A0A7V8V7C7_9BACT (Uncharacterized protein n=1 Tax=Bremerella alba TaxID=980252 RepID=A0A7V8V7C7_9BACT)

HSP 1 Score: 58.5 bits (140), Expect = 3.280e-8
Identity = 43/143 (30.07%), Postives = 66/143 (46.15%), Query Frame = 1
Query:    4 LALLAAVAGCGGQPPRSVDHAEVTGKVLLQGKPVPGGQVSFVAVTGGFAASGNIDENGNYQIKAPVGEVKITVNNTALQGRKGAGGKGAAGPKQLPHPKQSGAEEPNAKTQWVSIPSRYSNADTTDLKYTVTPGPQTHDINLS 432
            +A L  + GCG   P  ++   VTG V+L GKPV GG +SF     G AA G+I + G+YQ+  P G+ K+ +  + ++               +P         P       +IP +Y +  TTDL  +V+    T D  L+
Sbjct:    8 VASLLFLVGCGPAGPHMIN---VTGSVVLDGKPVQGGSISFENTATGHAARGDIGD-GSYQLAVPPGDYKVAIEPSLVE---------------IP---SKNPNSPPTTRYSENIPRKYHSVRTTDLNASVSDDQATFDFQLA 128          
BLAST of mRNA_P-wetherbeei_contig18200.1.1 vs. uniprot
Match: A0A3L7RH03_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7RH03_9BACT)

HSP 1 Score: 58.2 bits (139), Expect = 7.630e-8
Identity = 47/155 (30.32%), Postives = 73/155 (47.10%), Query Frame = 1
Query:    1 LLALLAAVAGCGGQPPRSVDHAEVTGKVLLQGKPVPGGQVSFVAV-------TGGFAASGNIDENGNYQIKAPVGEVKITVNNTALQGRKGAGGKGAAGPKQLPHPKQSGAEEPNAKTQ----WVSIPSRYSNADTTDLKYTVTPGPQTHDINLS 432
            +  +LA   GC  Q P+      + G+V+  GKPVPGG +SFV++         GF   G    +G ++I+ PV EV + V+N   +           G    P  ++S +E   A ++    WV +P RY   +T+ +K  V  GPQ   I L+
Sbjct:    9 IFTILALFVGC--QRPKGT----IEGEVIFDGKPVPGGMLSFVSIGPKDKLTVEGFCELGR---DGKFKIELPVAEVMVGVDNREFEPMPATRPAMLPGDNLPPEVRKSLSEGTKAASRVSDRWVQLPERYYLPETSKIKIKVAKGPQNLQIELT 154          
BLAST of mRNA_P-wetherbeei_contig18200.1.1 vs. uniprot
Match: A0A8E6B473_9BACT (Uncharacterized protein n=1 Tax=Telmatocola sphagniphila TaxID=1123043 RepID=A0A8E6B473_9BACT)

HSP 1 Score: 55.5 bits (132), Expect = 1.270e-6
Identity = 50/168 (29.76%), Postives = 69/168 (41.07%), Query Frame = 1
Query:   28 GCGGQPPRSVDHAEVTGKVLLQGKPVPGGQVSFVA-----VTGGFAASGNIDENGNYQIKAPVGEVKITVNNTALQ------------------GRKGAGGKGAAGPKQLPHPKQSGAEEPNAKTQ----------WVSIPSRYSNADTTDLKYTVTPGPQTHDINLS 432
            GC G    SV++A++TG V + GK V  G V  V      VTGG    G I  +G Y  KAPVG++K+ +   A +                  G KG   KG           + G   P A             +V IPS+Y   +T+ L Y +  G  T +I L+
Sbjct:   25 GCSG----SVEYADMTGSVSIDGKAVTAGSVYIVLADNPEVTGG----GVIKGDGTYTCKAPVGKIKVAIQTLAFKPGGANDSKTKSSAPSTAPGAKGGAAKGPPAGYSKEGFSKKGTTTPQAPAWASGDSDHPPVYVKIPSKYEKVETSGLTYDIHKGSNTIEITLA 184          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18200.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A6M5YT37_9BACT3.150e-3788.16Uncharacterized protein n=1 Tax=Frigoriglobus tund... [more]
A0A354GZL7_9BACT3.150e-2366.67Uncharacterized protein n=1 Tax=Planctomycetales b... [more]
A0A7V3RQU6_9BACT2.870e-1841.43Uncharacterized protein n=1 Tax=Gemmataceae bacter... [more]
A0A538S1T7_9BACT3.520e-1636.97Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A7V3VYQ5_9BACT6.610e-1638.62Uncharacterized protein n=1 Tax=Gemmataceae bacter... [more]
A0A177PV00_9PLAN1.030e-1333.33Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
A0A5C5ZHR1_9BACT1.320e-835.10Uncharacterized protein n=1 Tax=Pseudobythopirellu... [more]
A0A7V8V7C7_9BACT3.280e-830.07Uncharacterized protein n=1 Tax=Bremerella alba Ta... [more]
A0A3L7RH03_9BACT7.630e-830.32Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A8E6B473_9BACT1.270e-629.76Uncharacterized protein n=1 Tax=Telmatocola sphagn... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18200contigP-wetherbeei_contig18200:9..443 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1123508.JH636441_gene3709
Model size435
Max annot lvl203682|Planctomycetes
Hectar predicted targeting categorysignal peptide
Exons1
Evalue8.89e-09
EggNOG OGs2EBCW@1|root,335DK@2|Bacteria,2J166@203682|Planctomycetes
Cds size435
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186139.151993-CDS-P-wetherbeei_contig18200:8..4431683186139.151993-CDS-P-wetherbeei_contig18200:8..443Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18200 9..443 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18200.1.1prot_P-wetherbeei_contig18200.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18200 9..443 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18200.1.1

>prot_P-wetherbeei_contig18200.1.1 ID=prot_P-wetherbeei_contig18200.1.1|Name=mRNA_P-wetherbeei_contig18200.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=145bp
LLALLAAVAGCGGQPPRSVDHAEVTGKVLLQGKPVPGGQVSFVAVTGGFA
ASGNIDENGNYQIKAPVGEVKITVNNTALQGRKGAGGKGAAGPKQLPHPK
QSGAEEPNAKTQWVSIPSRYSNADTTDLKYTVTPGPQTHDINLSS
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mRNA from alignment at P-wetherbeei_contig18200:9..443-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18200.1.1 ID=mRNA_P-wetherbeei_contig18200.1.1|Name=mRNA_P-wetherbeei_contig18200.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=435bp|location=Sequence derived from alignment at P-wetherbeei_contig18200:9..443- (Phaeothamnion wetherbeei SAG_119_79)
CTGCTCGCGCTGCTGGCGGCGGTCGCGGGCTGTGGGGGCCAGCCGCCGCG GTCGGTCGATCACGCGGAGGTGACGGGAAAGGTGCTGCTCCAGGGCAAGC CCGTCCCCGGGGGGCAGGTGAGTTTCGTCGCCGTGACCGGCGGGTTCGCC GCGTCCGGGAACATTGACGAGAACGGCAACTACCAGATCAAGGCCCCGGT CGGCGAGGTCAAGATCACGGTGAACAACACGGCGCTACAGGGCCGGAAGG GCGCCGGCGGCAAGGGGGCCGCGGGTCCGAAACAGCTCCCGCACCCGAAG CAGTCGGGCGCGGAAGAGCCCAACGCGAAAACGCAGTGGGTCAGCATCCC CTCCCGCTATTCGAACGCCGACACGACCGACCTGAAGTACACGGTGACAC CGGGTCCGCAGACCCACGACATCAACCTGTCGAGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18200:9..443-

>mRNA_P-wetherbeei_contig18200.1.1 ID=mRNA_P-wetherbeei_contig18200.1.1|Name=mRNA_P-wetherbeei_contig18200.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=435bp|location=Sequence derived from alignment at P-wetherbeei_contig18200:9..443- (Phaeothamnion wetherbeei SAG_119_79)
CTGCTCGCGCTGCTGGCGGCGGTCGCGGGCTGTGGGGGCCAGCCGCCGCG
GTCGGTCGATCACGCGGAGGTGACGGGAAAGGTGCTGCTCCAGGGCAAGC
CCGTCCCCGGGGGGCAGGTGAGTTTCGTCGCCGTGACCGGCGGGTTCGCC
GCGTCCGGGAACATTGACGAGAACGGCAACTACCAGATCAAGGCCCCGGT
CGGCGAGGTCAAGATCACGGTGAACAACACGGCGCTACAGGGCCGGAAGG
GCGCCGGCGGCAAGGGGGCCGCGGGTCCGAAACAGCTCCCGCACCCGAAG
CAGTCGGGCGCGGAAGAGCCCAACGCGAAAACGCAGTGGGTCAGCATCCC
CTCCCGCTATTCGAACGCCGACACGACCGACCTGAAGTACACGGTGACAC
CGGGTCCGCAGACCCACGACATCAACCTGTCGAGC
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