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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Model size | 3673 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 2949 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186139.0322416-UTR-P-wetherbeei_contig1820:1971..2695 | 1683186139.0322416-UTR-P-wetherbeei_contig1820:1971..2695 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig1820 1972..2695 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186139.052673-CDS-P-wetherbeei_contig1820:2695..3100 | 1683186139.052673-CDS-P-wetherbeei_contig1820:2695..3100 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig1820 2696..3100 + |
| 1683186139.0645986-CDS-P-wetherbeei_contig1820:3158..5702 | 1683186139.0645986-CDS-P-wetherbeei_contig1820:3158..5702 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig1820 3159..5702 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1820.2.1 >prot_P-wetherbeei_contig1820.2.1 ID=prot_P-wetherbeei_contig1820.2.1|Name=mRNA_P-wetherbeei_contig1820.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=983bp
MGRENGDATSVKLTGGGWCGGGRGGSGRRQNGISCRGGDGGSGDGKHRGP
NGQSAEKPAGPDNGDSWRRRRISADSDSSFAAAGVARAVGWHHSSRAGIA
AAVTASAERPSSRKPAGAAGRGGASAAAAAAAAAAHWAQEEQERLCQLKL
EQRADAMATARARKAAADVAAEREATARWEAEQRQKKAAVAMEAERRQRE
ERMTLGLALMTAIRQKAEEAAARRLVVEKWFAAERRHRRQEKRKRSVESL
LSACVEIGFGDAGERLQRPRYMTSVLKPQRSPSFSLMEPVAPRRLVPPPE
PLPLAALVRQSLRVAAPRDDAAVRGLGVEPLASSRPRQFFKLLLASAGEA
PDAGTCAWLEACLRGPMDGPAAAAAAVAGVAESSPTLQLSLQSDPVVCVR
RFNAAVAGGSSCDGGGGGGCMLSAAASAEADLAVAGTDVMVFVPGWQMDA
AGNADWSAAAAALRQLYQACGDARRPAVLVVVAPWTLPRGPSGGGCGTSG
RRGGRLGEVTAESIWRALQLNTLLSPAKVMLLPDNAGTDVSAAAGSLLAI
DLQRAAMKAAEATPGPEVYARSLPMLLKEVAVAALEAAGSHGNGAAPVAC
VRAANAALREAAAALFGHEQESVAQLAPEFFTGLEGIAAGGAGTSYDGIL
PAIAAAAEKLPRDWNSGSRLQRLRCAASLAELPEAVCAGGAEARPVIDGA
EAWRVVDGLLAVLTKAGLAVKPSFCGWLRTAFFDPDGPRNVDGWTWSAVL
GAIMERWVDHRVAENEVAYIALTPRAAAWGRAQAAMAEERAAERDVAAVR
GELASCQLALQQGQWQRQRQWQQQREQQPLLLGGVDGGTAVLTASPMPAR
RVSLPNRSPTLSPVHRPLRGRRRKVLENSTAPSQAQPKRSRAGEVTAECG
EAVELAEHLGAVVMMQDRDLRENAIWNGLSVPVLPFGAAAAHVVGGGVDT
GVGDLGGGGGGDGGNRDGGDGGGGSGDRGDSGG back to topmRNA from alignment at P-wetherbeei_contig1820:1972..5702+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig1820.2.1 ID=mRNA_P-wetherbeei_contig1820.2.1|Name=mRNA_P-wetherbeei_contig1820.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3731bp|location=Sequence derived from alignment at P-wetherbeei_contig1820:1972..5702+ (Phaeothamnion wetherbeei SAG_119_79)
AGCCGGCGTCCCCACGTGAGGCCGAGTTTCGAGGGTACATGCTGGTGATG
GCGGCGCTCCTGAAGAACAAGCTGGGGCCGCCGATGACCTTGCGGCATCT
GGCGAAGGTGTCACCGCTCCTGCTGCGTGCGCCGCCGGTACTGCGGGCAC
GACGGGTACTCAGCATCGTGAAAATGGAGCAGCCGAACATGGAGGCGTTC
TTCCAGGAGATGGCGGCGGCGCCCTACCTGATGCGGTGCTGCATGCTCCA
CTGGGTCCCGCAAATGTGGTGGAACGGAGCCAGAGCATTCCGGTCCGGGA
TTCGAGAGCTGCATGCCCAGCGCAACATGCGGGCCATGACCTTCACCAAC
TGGCCGCCGGAGTGGATCTGCAACTATTTTCGCCTGGAGAGTGACGAGCT
TTGGAAATTACTCGACGATCAGCTCTTCGAACGCTTCCGCAACCCTAAAA
AGTACGTTAATAAGAAGGGAAAGCCTACGTGGCCGAACTGGCTCGAGTCG
AAGCTTGTTCATGTCCCTTATATGCCGAACCTCATTGAGGGGGCGGCAGC
AGGCCTCGGCCTTTCGGAGGTCGTGCGGGGGGAAGGGGCTGCTGCCGCTT
TGCCGCCGCTGGCTGTCCCTGCGGCAGCGGCAGCGACGGCGGCGGCGGCG
GCGACGGCACCAGCCGTCCCCTCCGCGGCCGCAGCGGCGGCGGTGGCGGC
GTCGCCGGCGGCACGGGATGCAGCATGGGCCGAGAGAATGGTGATGCCAC
TAGCGTCAAGCTCACGGGCGGCGGCTGGTGCGGCGGCGGCCGCGGCGGGA
GTGGGCGGCGCCAGAACGGCATCTCGTGCCGCGGGGGCGACGGCGGAAGC
GGCGACGGCAAACACCGCGGACCAAACGGCCAGAGTGCCGAGAAGCCCGC
TGGCCCCGACAACGGCGACAGCTGGCGGAGGAGGAGGATTTCGGCCGATT
CCGATTCCTCCTTCGCCGCCGCAGGCGTTGCCCGCGCCGTGGGGTGGCAC
CATAGCAGCCGCGCCGGGATCGCCGCCGCTGTCACCGCATCTGCCGAGCG
GCCAAGCAGCCGCAAGCCAGCTGGCGCAGCAGGCCGAGGCGGCGCGTCAG
CAGCAGCAGCAGCAGCGGCAGCAGCAGCAGCAGTTGCTGCAGCTGCAGCT
GCAGCAGCAGCAGCACTGGGCGCAGGAGCAGCAGCAGCACTGGGCGCAGG
AGGAGCAAGAGCGCCTGTGCCAGCTCAAGCTGGAGCAGCGCGCCGACGCC
ATGGCAACCGCGCGGGCCCGCAAGGCGGCGGCCGACGTGGCGGCTGAGCG
AGAGGCGACGGCGCGGTGGGAGGCGGAGCAGCGGCAAAAGAAGGCAGCGG
TGGCGATGGAGGCTGAACGGCGGCAGCGGGAGGAACGGATGACGCTTGGC
CTCGCGCTCATGACAGCGATCCGTCAAAAGGCGGAAGAAGCGGCCGCCCG
CCGTCTGGTCGTGGAGAAGTGGTTCGCGGCGGAGCGCCGCCATCGCCGCC
AGGAGAAGCGGAAGCGCAGTGTGGAGTCCCTCCTCAGCGCGTGTGTCGAA
ATCGGCTTCGGCGACGCCGGCGAACGGCTTCAGCGCCCGCGCTACATGAC
CTCGGTGCTCAAGCCGCAGCGCTCGCCGTCCTTTTCGCTGATGGAGCCCG
TCGCGCCGCGGCGGCTCGTGCCACCGCCAGAGCCGCTGCCGCTGGCGGCG
CTCGTCCGGCAGTCGCTGCGCGTGGCGGCCCCGAGGGACGACGCGGCGGT
GCGCGGCCTCGGCGTCGAGCCGCTCGCGTCGTCGCGGCCGCGGCAGTTTT
TCAAGCTGCTGCTGGCGTCTGCGGGCGAGGCACCGGACGCCGGCACCTGC
GCGTGGCTGGAAGCGTGCCTGCGCGGTCCGATGGACGGGCCAGCCGCCGC
CGCCGCCGCCGTGGCGGGGGTGGCGGAATCATCGCCGACGCTGCAGCTCA
GCCTGCAATCGGACCCAGTCGTCTGCGTGCGCCGCTTTAACGCGGCGGTT
GCGGGTGGCAGTAGCTGCGACGGCGGCGGCGGCGGCGGTTGCATGCTGTC
GGCAGCGGCCTCAGCCGAAGCGGATCTCGCCGTTGCGGGGACAGACGTCA
TGGTGTTCGTTCCTGGCTGGCAGATGGACGCTGCCGGCAACGCGGACTGG
TCGGCCGCCGCTGCCGCGCTGCGGCAGCTCTACCAGGCGTGCGGCGATGC
TCGCCGCCCTGCCGTTCTCGTCGTCGTTGCTCCGTGGACCCTGCCGCGCG
GTCCAAGTGGCGGCGGCTGTGGAACGAGCGGGCGACGCGGTGGCCGACTC
GGAGAAGTGACCGCGGAAAGCATCTGGCGAGCGCTGCAGTTGAACACGTT
GCTGTCGCCCGCCAAGGTCATGCTCCTGCCGGATAATGCCGGCACGGACG
TGAGCGCCGCCGCCGGGAGTCTGCTGGCGATCGATCTGCAGCGGGCAGCA
ATGAAGGCGGCAGAGGCCACGCCGGGCCCGGAAGTGTATGCCCGCAGCCT
CCCGATGCTGCTGAAAGAGGTGGCAGTCGCGGCGCTCGAAGCGGCGGGGT
CTCACGGCAATGGCGCTGCGCCGGTGGCGTGTGTTCGGGCGGCCAATGCA
GCACTGCGTGAAGCTGCGGCGGCGCTTTTCGGACACGAGCAGGAGAGCGT
TGCCCAGCTCGCCCCGGAGTTCTTCACGGGGCTTGAAGGCATCGCCGCGG
GCGGCGCCGGCACGAGCTACGACGGGATTCTGCCGGCCATTGCTGCCGCG
GCCGAAAAGCTGCCGCGGGATTGGAACAGCGGCTCGCGGCTGCAGCGACT
GCGGTGCGCGGCCAGCCTCGCCGAGCTGCCGGAGGCCGTCTGCGCCGGCG
GCGCCGAAGCGAGACCGGTCATTGACGGTGCTGAGGCGTGGCGCGTCGTG
GATGGCCTGTTGGCAGTGCTGACCAAAGCCGGCCTCGCGGTGAAGCCGAG
CTTCTGCGGCTGGCTCCGCACGGCGTTCTTCGACCCCGACGGCCCCAGGA
ACGTAGACGGGTGGACCTGGAGCGCCGTACTGGGGGCGATTATGGAACGC
TGGGTTGACCACCGCGTCGCCGAGAACGAGGTGGCGTACATCGCGCTAAC
GCCCCGCGCCGCGGCGTGGGGGCGCGCGCAGGCTGCAATGGCGGAGGAGC
GGGCAGCGGAGCGGGACGTGGCTGCCGTCCGTGGCGAGCTGGCGTCTTGC
CAGCTGGCCTTGCAGCAGGGGCAGTGGCAACGACAGCGGCAGTGGCAGCA
GCAGCGGGAGCAGCAACCGCTGCTTCTTGGCGGCGTCGACGGCGGTACCG
CCGTTTTAACGGCGTCGCCGATGCCGGCGCGGCGCGTCTCTCTGCCCAAC
CGCAGCCCGACGCTGTCGCCGGTGCATCGGCCGTTGAGAGGGAGGCGGCG
CAAGGTGCTCGAAAACTCGACGGCGCCGAGCCAGGCGCAGCCGAAGCGCT
CGCGAGCGGGGGAGGTGACGGCGGAATGCGGAGAGGCGGTGGAGCTGGCG
GAGCACCTGGGGGCTGTTGTCATGATGCAGGACCGCGATCTGCGGGAGAA
CGCCATCTGGAACGGCTTATCAGTGCCCGTTCTTCCCTTTGGCGCCGCCG
CCGCGCATGTTGTTGGCGGCGGCGTTGACACCGGCGTTGGTGACCTCGGT
GGCGGCGGCGGCGGCGATGGCGGCAACAGAGATGGTGGCGATGGTGGCGG
TGGTAGTGGCGATCGCGGCGACAGTGGCGGC back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig1820:1972..5702+ >mRNA_P-wetherbeei_contig1820.2.1 ID=mRNA_P-wetherbeei_contig1820.2.1|Name=mRNA_P-wetherbeei_contig1820.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2949bp|location=Sequence derived from alignment at P-wetherbeei_contig1820:1972..5702+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGGCCGAGAGAATGGTGATGCCACTAGCGTCAAGCTCACGGGCGGCGG
CTGGTGCGGCGGCGGCCGCGGCGGGAGTGGGCGGCGCCAGAACGGCATCT
CGTGCCGCGGGGGCGACGGCGGAAGCGGCGACGGCAAACACCGCGGACCA
AACGGCCAGAGTGCCGAGAAGCCCGCTGGCCCCGACAACGGCGACAGCTG
GCGGAGGAGGAGGATTTCGGCCGATTCCGATTCCTCCTTCGCCGCCGCAG
GCGTTGCCCGCGCCGTGGGGTGGCACCATAGCAGCCGCGCCGGGATCGCC
GCCGCTGTCACCGCATCTGCCGAGCGGCCAAGCAGCCGCAAGCCAGCTGG
CGCAGCAGGCCGAGGCGGCGCGTCAGCAGCAGCAGCAGCAGCGGCAGCAG
CAGCACACTGGGCGCAGGAGGAGCAAGAGCGCCTGTGCCAGCTCAAGCTG
GAGCAGCGCGCCGACGCCATGGCAACCGCGCGGGCCCGCAAGGCGGCGGC
CGACGTGGCGGCTGAGCGAGAGGCGACGGCGCGGTGGGAGGCGGAGCAGC
GGCAAAAGAAGGCAGCGGTGGCGATGGAGGCTGAACGGCGGCAGCGGGAG
GAACGGATGACGCTTGGCCTCGCGCTCATGACAGCGATCCGTCAAAAGGC
GGAAGAAGCGGCCGCCCGCCGTCTGGTCGTGGAGAAGTGGTTCGCGGCGG
AGCGCCGCCATCGCCGCCAGGAGAAGCGGAAGCGCAGTGTGGAGTCCCTC
CTCAGCGCGTGTGTCGAAATCGGCTTCGGCGACGCCGGCGAACGGCTTCA
GCGCCCGCGCTACATGACCTCGGTGCTCAAGCCGCAGCGCTCGCCGTCCT
TTTCGCTGATGGAGCCCGTCGCGCCGCGGCGGCTCGTGCCACCGCCAGAG
CCGCTGCCGCTGGCGGCGCTCGTCCGGCAGTCGCTGCGCGTGGCGGCCCC
GAGGGACGACGCGGCGGTGCGCGGCCTCGGCGTCGAGCCGCTCGCGTCGT
CGCGGCCGCGGCAGTTTTTCAAGCTGCTGCTGGCGTCTGCGGGCGAGGCA
CCGGACGCCGGCACCTGCGCGTGGCTGGAAGCGTGCCTGCGCGGTCCGAT
GGACGGGCCAGCCGCCGCCGCCGCCGCCGTGGCGGGGGTGGCGGAATCAT
CGCCGACGCTGCAGCTCAGCCTGCAATCGGACCCAGTCGTCTGCGTGCGC
CGCTTTAACGCGGCGGTTGCGGGTGGCAGTAGCTGCGACGGCGGCGGCGG
CGGCGGTTGCATGCTGTCGGCAGCGGCCTCAGCCGAAGCGGATCTCGCCG
TTGCGGGGACAGACGTCATGGTGTTCGTTCCTGGCTGGCAGATGGACGCT
GCCGGCAACGCGGACTGGTCGGCCGCCGCTGCCGCGCTGCGGCAGCTCTA
CCAGGCGTGCGGCGATGCTCGCCGCCCTGCCGTTCTCGTCGTCGTTGCTC
CGTGGACCCTGCCGCGCGGTCCAAGTGGCGGCGGCTGTGGAACGAGCGGG
CGACGCGGTGGCCGACTCGGAGAAGTGACCGCGGAAAGCATCTGGCGAGC
GCTGCAGTTGAACACGTTGCTGTCGCCCGCCAAGGTCATGCTCCTGCCGG
ATAATGCCGGCACGGACGTGAGCGCCGCCGCCGGGAGTCTGCTGGCGATC
GATCTGCAGCGGGCAGCAATGAAGGCGGCAGAGGCCACGCCGGGCCCGGA
AGTGTATGCCCGCAGCCTCCCGATGCTGCTGAAAGAGGTGGCAGTCGCGG
CGCTCGAAGCGGCGGGGTCTCACGGCAATGGCGCTGCGCCGGTGGCGTGT
GTTCGGGCGGCCAATGCAGCACTGCGTGAAGCTGCGGCGGCGCTTTTCGG
ACACGAGCAGGAGAGCGTTGCCCAGCTCGCCCCGGAGTTCTTCACGGGGC
TTGAAGGCATCGCCGCGGGCGGCGCCGGCACGAGCTACGACGGGATTCTG
CCGGCCATTGCTGCCGCGGCCGAAAAGCTGCCGCGGGATTGGAACAGCGG
CTCGCGGCTGCAGCGACTGCGGTGCGCGGCCAGCCTCGCCGAGCTGCCGG
AGGCCGTCTGCGCCGGCGGCGCCGAAGCGAGACCGGTCATTGACGGTGCT
GAGGCGTGGCGCGTCGTGGATGGCCTGTTGGCAGTGCTGACCAAAGCCGG
CCTCGCGGTGAAGCCGAGCTTCTGCGGCTGGCTCCGCACGGCGTTCTTCG
ACCCCGACGGCCCCAGGAACGTAGACGGGTGGACCTGGAGCGCCGTACTG
GGGGCGATTATGGAACGCTGGGTTGACCACCGCGTCGCCGAGAACGAGGT
GGCGTACATCGCGCTAACGCCCCGCGCCGCGGCGTGGGGGCGCGCGCAGG
CTGCAATGGCGGAGGAGCGGGCAGCGGAGCGGGACGTGGCTGCCGTCCGT
GGCGAGCTGGCGTCTTGCCAGCTGGCCTTGCAGCAGGGGCAGTGGCAACG
ACAGCGGCAGTGGCAGCAGCAGCGGGAGCAGCAACCGCTGCTTCTTGGCG
GCGTCGACGGCGGTACCGCCGTTTTAACGGCGTCGCCGATGCCGGCGCGG
CGCGTCTCTCTGCCCAACCGCAGCCCGACGCTGTCGCCGGTGCATCGGCC
GTTGAGAGGGAGGCGGCGCAAGGTGCTCGAAAACTCGACGGCGCCGAGCC
AGGCGCAGCCGAAGCGCTCGCGAGCGGGGGAGGTGACGGCGGAATGCGGA
GAGGCGGTGGAGCTGGCGGAGCACCTGGGGGCTGTTGTCATGATGCAGGA
CCGCGATCTGCGGGAGAACGCCATCTGGAACGGCTTATCAGTGCCCGTTC
TTCCCTTTGGCGCCGCCGCCGCGCATGTTGTTGGCGGCGGCGTTGACACC
GGCGTTGGTGACCTCGGTGGCGGCGGCGGCGGCGATGGCGGCAACAGAGA
TGGTGGCGATGGTGGCGGTGGTAGTGGCGATCGCGGCGACAGTGGCGGC back to top
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