prot_P-wetherbeei_contig182.1.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig182.1.2
Unique Nameprot_P-wetherbeei_contig182.1.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length367
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig182.1.2 vs. uniprot
Match: A0A7S3XZX8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZX8_HETAK)

HSP 1 Score: 66.2 bits (160), Expect = 1.640e-8
Identity = 34/62 (54.84%), Postives = 47/62 (75.81%), Query Frame = 0 
Query:  293 EDRRSVRNMREQKRSLRINRQIDELRDVLLEAGVTVKPNKYAILATVVDHMLALQSRSKELD 354
            E +R  RNMREQKRS++I++QID LR +L EAG  VKPNK+A+L+ VV +M  L  +++ LD
Sbjct:   24 EKKRKDRNMREQKRSVKISKQIDRLRALLQEAGAQVKPNKHAVLSGVVHYMAQLHKQAQALD 85
[Close]
BLAST of mRNA_P-wetherbeei_contig182.1.2 vs. uniprot
Match: B7FV23_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FV23_PHATC)

HSP 1 Score: 61.2 bits (147), Expect = 1.280e-6
Identity = 36/64 (56.25%), Postives = 44/64 (68.75%), Query Frame = 0 
Query:  293 EDRRSVRNMREQKRSLRINRQIDELRDVLLEAGVTVKPNKYAILATVVDHMLALQSRSKELDGE 356
            E RR  RN REQ+RS +I  QID L++VL EA V  KP+KY+ L TVVD++  LQ RS  LD E
Sbjct:  233 ERRRYDRNAREQQRSQQITVQIDVLKNVLTEANVQFKPDKYSTLVTVVDYVKTLQERSTLLDQE 296
[Close]
BLAST of mRNA_P-wetherbeei_contig182.1.2 vs. uniprot
Match: A0A1Z5KAN4_FISSO (BHLH domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KAN4_FISSO)

HSP 1 Score: 58.5 bits (140), Expect = 8.910e-6
Identity = 32/69 (46.38%), Postives = 49/69 (71.01%), Query Frame = 0 
Query:  288 RSVPVEDRRSVRNMREQKRSLRINRQIDELRDVLLEAGVTVKPNKYAILATVVDHMLALQSRSKELDGE 356
            R  P   RR  RN++EQ+RS +I++QI +LRDVL EA V+ K NK++IL +V +++  LQS++  LD +
Sbjct:  199 RLSPSSKRRYERNLKEQQRSHQISQQIKQLRDVLTEANVSFKSNKFSILVSVSEYIQQLQSQAIMLDAD 267
[Close]
BLAST of mRNA_P-wetherbeei_contig182.1.2 vs. uniprot
Match: A0A1Z5KAW5_FISSO (BHLH domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KAW5_FISSO)

HSP 1 Score: 57.8 bits (138), Expect = 1.580e-5
Identity = 32/69 (46.38%), Postives = 48/69 (69.57%), Query Frame = 0 
Query:  288 RSVPVEDRRSVRNMREQKRSLRINRQIDELRDVLLEAGVTVKPNKYAILATVVDHMLALQSRSKELDGE 356
            R  P   RR  RN++EQ+RS +I++QI +LRDVL EA V  K NK++IL +V +++  LQS++  LD +
Sbjct:  201 RLSPSSKRRYERNLKEQQRSHQISQQIKQLRDVLTEANVPFKSNKFSILVSVSEYIQQLQSQAIMLDAD 269
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig182.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A7S3XZX8_HETAK1.640e-854.84Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
B7FV23_PHATC1.280e-656.25Predicted protein n=3 Tax=Phaeodactylum tricornutu... [more]
A0A1Z5KAN4_FISSO8.910e-646.38BHLH domain-containing protein n=1 Tax=Fistulifera... [more]
A0A1Z5KAW5_FISSO1.580e-546.38BHLH domain-containing protein n=1 Tax=Fistulifera... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 300..352
e-value: 1.3E-6
score: 37.9
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 295..347
e-value: 9.1E-9
score: 35.2
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 294..346
score: 11.229586
IPR036638Helix-loop-helix DNA-binding domain superfamilyGENE3D4.10.280.10coord: 290..363
e-value: 2.0E-9
score: 39.3
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 286..354
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 204..225
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..44
NoneNo IPR availableCDDcd00083bHLH_SFcoord: 303..348
e-value: 5.95456E-7
score: 43.6629

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig182contigP-wetherbeei_contig182:1682..3677 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig182.1.2mRNA_P-wetherbeei_contig182.1.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig182 1200..4085 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig182.1.2 ID=prot_P-wetherbeei_contig182.1.2|Name=mRNA_P-wetherbeei_contig182.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=367bp
MQQGKTAERERDQGRNKSYNNENMTTEEGGSGEQRGARHNFASNVSPQLW
AQNTAGGAFAGASYGSFGALGGFGFQPNFVPFTLAGNGGIYSLGTGANIN
FYPGALIGGGGVGGGVMGYSLPTVPTNLGPGSTFSPALGRNVMLPNTTAG
RIQKSTSAGATGAAPATVVAAAPILIMEGIARPLDQMQQDMDTATATVPA
LAMQQQEGATATPAPATPIPTLIGDGGAAAGWAPVQSQAEMQMHATLVPQ
SEPTTPAAVAGMAVAGASSADHGAAFRSGGRAKNGKGRSVPVEDRRSVRN
MREQKRSLRINRQIDELRDVLLEAGVTVKPNKYAILATVVDHMLALQSRS
KELDGEGGREGRGEQG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
IPR036638HLH_DNA-bd_sf