mRNA_P-wetherbeei_contig18198.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18198.2.1 vs. uniprot
Match: UPI000DA15162 (hypothetical protein n=1 Tax=Rhodopseudomonas faecalis TaxID=99655 RepID=UPI000DA15162) HSP 1 Score: 94.4 bits (233), Expect = 3.450e-24 Identity = 41/56 (73.21%), Postives = 46/56 (82.14%), Query Frame = 1
Query: 7 WHRIESAPEDVDLELAVIDSEGPHALVFPCRRTEQGWVDT-NGKSVPVHPTHWRKW 171
W IESAP D DLELAVID +GPHALVFPCRRT+QGW D+ +GK V V PTHWR+W
Sbjct: 2 WQSIESAPYDQDLELAVIDDDGPHALVFPCRRTKQGWADSKSGKPVEVRPTHWREW 57
BLAST of mRNA_P-wetherbeei_contig18198.2.1 vs. uniprot
Match: Q218S9_RHOPB (Uncharacterized protein n=3 Tax=Rhodopseudomonas TaxID=1073 RepID=Q218S9_RHOPB) HSP 1 Score: 92.8 bits (229), Expect = 1.410e-23 Identity = 38/56 (67.86%), Postives = 46/56 (82.14%), Query Frame = 1
Query: 7 WHRIESAPEDVDLELAVIDSEGPHALVFPCRRTEQGWVDT-NGKSVPVHPTHWRKW 171
WH I++AP D DLELAVID +GPHALVFPCRR++ GW + +GK V VHPTHWR+W
Sbjct: 2 WHMIDTAPYDQDLELAVIDDDGPHALVFPCRRSKDGWAEAKSGKPVEVHPTHWREW 57
BLAST of mRNA_P-wetherbeei_contig18198.2.1 vs. uniprot
Match: Q07RA0_RHOP5 (Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) TaxID=316055 RepID=Q07RA0_RHOP5) HSP 1 Score: 87.8 bits (216), Expect = 1.540e-21 Identity = 38/56 (67.86%), Postives = 43/56 (76.79%), Query Frame = 1
Query: 7 WHRIESAPEDVDLELAVIDSEGPHALVFPCRRTEQGWVDT-NGKSVPVHPTHWRKW 171
W I +AP D DLELAVID EGPHALVFPCRR + GW D+ +GK V V PTHWR+W
Sbjct: 2 WQSIATAPYDQDLELAVIDDEGPHALVFPCRRIKDGWADSKSGKPVEVRPTHWREW 57
BLAST of mRNA_P-wetherbeei_contig18198.2.1 vs. uniprot
Match: UPI001FDAAD19 (hypothetical protein n=1 Tax=Bradyrhizobium sp. ARR65 TaxID=1040989 RepID=UPI001FDAAD19) HSP 1 Score: 85.9 bits (211), Expect = 8.250e-21 Identity = 38/57 (66.67%), Postives = 42/57 (73.68%), Query Frame = 1
Query: 7 WHRIESAPEDVDLELAVIDSEGPHALVFPCRRTEQGWVDTN-GKSVPVHPTHWRKWM 174
W RI SAP D+DLELAVID+E PHALVFPCRR GWV+ V VHPTHWR+W
Sbjct: 8 WQRIASAPYDLDLELAVIDAEDPHALVFPCRRGVPGWVNAETADPVDVHPTHWREWQ 64
BLAST of mRNA_P-wetherbeei_contig18198.2.1 vs. uniprot
Match: A0A2A2V5F7_9BRAD (Uncharacterized protein n=2 Tax=Bradyrhizobium TaxID=374 RepID=A0A2A2V5F7_9BRAD) HSP 1 Score: 83.6 bits (205), Expect = 7.730e-20 Identity = 34/58 (58.62%), Postives = 45/58 (77.59%), Query Frame = 1
Query: 1 MSWHRIESAPEDVDLELAVIDSEGPHALVFPCRRTEQGWV-DTNGKSVPVHPTHWRKW 171
M WH IE+AP D +LELAVIDS+G H+L+FPCRR GW+ T+G ++ + PTHWR+W
Sbjct: 1 MHWHHIENAPFDRELELAVIDSDGVHSLIFPCRRVLGGWIISTSGAALKIRPTHWREW 58
BLAST of mRNA_P-wetherbeei_contig18198.2.1 vs. uniprot
Match: A0A346A3Q4_9HYPH (Uncharacterized protein n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A346A3Q4_9HYPH) HSP 1 Score: 82.4 bits (202), Expect = 1.850e-19 Identity = 36/61 (59.02%), Postives = 43/61 (70.49%), Query Frame = 1
Query: 7 WHRIESAPEDVDLELAVIDSEGPHALVFPCRRTEQGWVDTNGKS-VPVHPTHWRKWMPEAA 186
W I SAP D DLELAVID +GPHALVFPCRR GW++ K + +HPTHWR+W + A
Sbjct: 2 WQIISSAPFDRDLELAVIDEDGPHALVFPCRRILNGWMNAATKERLDIHPTHWRQWAGDGA 62
BLAST of mRNA_P-wetherbeei_contig18198.2.1 vs. uniprot
Match: UPI001FE5DA66 (hypothetical protein n=1 Tax=Mesorhizobium silamurunense TaxID=499528 RepID=UPI001FE5DA66) HSP 1 Score: 80.9 bits (198), Expect = 9.260e-19 Identity = 34/63 (53.97%), Postives = 42/63 (66.67%), Query Frame = 1
Query: 7 WHRIESAPEDVDLELAVIDSEGPHALVFPCRRTEQGWVDT-NGKSVPVHPTHWRKWMPEAARQ 192
W+ IESAP LELAVID++G HALVFPC + GW + G + +HPTHWR W P+ RQ
Sbjct: 2 WNPIESAPSGCYLELAVIDNDGVHALVFPCEKASAGWTNVVTGARLDIHPTHWRAWKPQVYRQ 64
BLAST of mRNA_P-wetherbeei_contig18198.2.1 vs. uniprot
Match: A0A435TUR3_9HYPH (Uncharacterized protein n=4 Tax=unclassified Mesorhizobium TaxID=325217 RepID=A0A435TUR3_9HYPH) HSP 1 Score: 80.9 bits (198), Expect = 1.000e-18 Identity = 36/62 (58.06%), Postives = 43/62 (69.35%), Query Frame = 1
Query: 7 WHRIESAPEDVDLELAVIDSEGPHALVFPCRRTEQGWVD-TNGKSVPVHPTHWRKWMPEAAR 189
W+ I SAP DLELAV+D EG HALVFPC R+ +GW + T G V + PTHWR W PE A+
Sbjct: 2 WNSILSAPYGRDLELAVVDEEGTHALVFPCVRSREGWKNATTGARVDIRPTHWRDWEPEQAQ 63
BLAST of mRNA_P-wetherbeei_contig18198.2.1 vs. uniprot
Match: A0A1W6KRX5_9HYPH (Uncharacterized protein n=5 Tax=Rhizobium/Agrobacterium group TaxID=227290 RepID=A0A1W6KRX5_9HYPH) HSP 1 Score: 80.5 bits (197), Expect = 1.320e-18 Identity = 35/59 (59.32%), Postives = 41/59 (69.49%), Query Frame = 1
Query: 7 WHRIESAPEDVDLELAVIDSEGPHALVFPCRRTEQGWVDT-NGKSVPVHPTHWRKWMPE 180
W I AP D+ELAVID EG HALVFPC+R GWVD +G + VHPTHWR+W+ E
Sbjct: 2 WRSINDAPFAQDIELAVIDHEGVHALVFPCQRIFGGWVDARSGNKLEVHPTHWRRWLAE 60
BLAST of mRNA_P-wetherbeei_contig18198.2.1 vs. uniprot
Match: A0A8G0CV11_9HYPH (Uncharacterized protein n=1 Tax=Devosia salina TaxID=2860336 RepID=A0A8G0CV11_9HYPH) HSP 1 Score: 80.5 bits (197), Expect = 1.460e-18 Identity = 34/59 (57.63%), Postives = 43/59 (72.88%), Query Frame = 1
Query: 7 WHRIESAPEDVDLELAVIDSEGPHALVFPCRRTEQGWVD--TNGKSVPVHPTHWRKWMP 177
WH I +AP D D+ELAVID++G HALVFPCRR GWV+ +N K + P+HWR+W P
Sbjct: 17 WHAISTAPFDRDIELAVIDAQGTHALVFPCRRIASGWVNAQSNQKLSGLEPSHWREWQP 75 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18198.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18198.2.1 >prot_P-wetherbeei_contig18198.2.1 ID=prot_P-wetherbeei_contig18198.2.1|Name=mRNA_P-wetherbeei_contig18198.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=65bp MSWHRIESAPEDVDLELAVIDSEGPHALVFPCRRTEQGWVDTNGKSVPVHback to top mRNA from alignment at P-wetherbeei_contig18198:972..1166- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18198.2.1 ID=mRNA_P-wetherbeei_contig18198.2.1|Name=mRNA_P-wetherbeei_contig18198.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=195bp|location=Sequence derived from alignment at P-wetherbeei_contig18198:972..1166- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18198:972..1166- >mRNA_P-wetherbeei_contig18198.2.1 ID=mRNA_P-wetherbeei_contig18198.2.1|Name=mRNA_P-wetherbeei_contig18198.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=195bp|location=Sequence derived from alignment at P-wetherbeei_contig18198:972..1166- (Phaeothamnion wetherbeei SAG_119_79)back to top |