mRNA_P-wetherbeei_contig18065.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18065.1.1
Unique NamemRNA_P-wetherbeei_contig18065.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18065.1.1 vs. uniprot
Match: A0A6N7F7T5_9PROT (HWE_HK domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7F7T5_9PROT)

HSP 1 Score: 175 bits (444), Expect = 1.550e-46
Identity = 110/340 (32.35%), Postives = 188/340 (55.29%), Query Frame = 1
Query:   34 WPALTLHRHLLIFAFVIALPALAFSSYVLSRFAHSEREQFDLRLIQTASDLAADIDRDLQAMLVTVKTLSTSRALRTGAFEDFFLQSEESVAGTDLRVGLLTPGLDQVFTTLRPFGTILPRPNDVSTLAKALQSKAPQISDMVIGSVSGIPAFNVVFPVVDNGKVQHLIRLGFDADRLAKLLQAQDLSPGWVTGVTDRQGIVIARSHGQTSFVGQPMPSALQQRSQETRRVFEATNLEGRKVLRAVVRIPTSGWIVAATVDLPTVNSASSKAWWTLTLGGSGLLALAALLAALYARGLASGLSRAAASARALGRGESVARTPTSLISEVDSISDELVTAS 1053
            WP   L  HL +F  ++ LP +   +  ++ +  +ERE+ +      A+D++  IDR+L+ ++V +KTL+TS  L    + +F  ++  ++AGT   VGL+     Q+  T  P+GT+LP  +D  T +       P++S+++ G+V+  P FNV+ PVV +G V+H++     A  L    +  + S GW+ G++DR  ++++RSH    FVG+ + +  +  + +   V    +L+G +VLRA  R   SGWI AA + +  + ++  K W T  L   G++ L  LLAA  A+ +A  +      A ALGRGE+V R   S + E + +S+E+V AS
Sbjct:    7 WP---LRVHLAVFGLILLLPTIVPGAAGIAYYGMAERERLNRTGTALAADVSEQIDRELENLIVVLKTLATSPLLDGDGYREFDARARLAIAGTKTHVGLVDRSFRQLLNTRVPYGTLLPPTSDPETASAVFLRGQPRVSNLLEGNVAAEPVFNVMVPVVRDGTVRHVLIGTRPATSLLANARLPETSDGWIVGISDRNDMILSRSHDSGRFVGKQISADARALTTDRSGVHRGDSLDGVEVLRAYHRSSLSGWIAAAFIPVSALEASLEKTWITYVLIACGMVLLTVLLAAFVAQRVAQPIDALRHGALALGRGETVPRH-VSHLRESNEVSEEIVRAS 342          
BLAST of mRNA_P-wetherbeei_contig18065.1.1 vs. uniprot
Match: A0A5H2Z6I0_9BRAD (Sensor histidine kinase n=1 Tax=Bradyrhizobium sp. SG09 TaxID=2599805 RepID=A0A5H2Z6I0_9BRAD)

HSP 1 Score: 171 bits (432), Expect = 9.000e-45
Identity = 111/316 (35.13%), Postives = 178/316 (56.33%), Query Frame = 1
Query:   67 IFAFVIALPALAFSSYVLSRFAHSEREQFDLRLIQTASDLAADIDRDLQAMLVTVKTLSTSRALRTGAFEDFFLQSEESVAGTDLRVGLLTPGLDQVFTTLRPFGTILPRPNDVSTLAKALQSKAPQISDMVIGSVSGIPAFNVVFPVVD-NGKVQHLIRLGFDADRLAKLLQAQDLSPGWVTGVTDRQGIVIARSHGQTSFVGQPMPSALQQRSQETRRVFEATNLEGRKVLRAVVRIPTSGWIVAATVDLPTVNSASSK-AWWTLTLGGSGLLALAALLAALYARGLASGLSRAAASARALGRGESVARTPTSL 1008
            +FA  + LP L  +   L+R A  E+ Q + R++Q A +L   +DR+L   L+T++TL TS  LR+G  + F  Q+  ++  T   + L+     Q+  TL+ +G  LP  +D  T  + + S   QIS++  GSV+G+P FNV  PV   + +V++++ + F A  +A +L+   L P W+ GVTD  G+V+ARS  Q  +VG+P+P  L ++++    V+ A N+ G+ +LRA VR   +GW ++ATV          + A++   L G  L+ L   LA L+AR +A  L  A  +A ++GRGE V    TSL
Sbjct:   21 LFALALVLPLLLVAFIGLNRMAAIEQAQIERRVMQVAQNLRFVVDRELDRSLITLETLVTSSELRSGDLDAFHRQAVLALKPTKAAIVLIDTSYRQLVDTLKDYGADLPPTSDPVTAQRVIDSGKAQISNLFKGSVNGLPVFNVEVPVFGGDNRVRYVLIMSFQAAYIADVLKEVRLDPAWLAGVTDTNGVVLARSRQQDEYVGKPLPPDLFEQTKRADGVYPAVNIAGQSILRATVRSERAGWFISATVPRSHAEEPYDRSAFFAAVLVGLALI-LGGGLAYLFARLMALPLDLATRAAASVGRGEDVHAARTSL 335          
BLAST of mRNA_P-wetherbeei_contig18065.1.1 vs. uniprot
Match: UPI001BA7015C (sensor histidine kinase n=1 Tax=Bradyrhizobium jicamae TaxID=280332 RepID=UPI001BA7015C)

HSP 1 Score: 157 bits (397), Expect = 1.220e-39
Identity = 101/322 (31.37%), Postives = 175/322 (54.35%), Query Frame = 1
Query:   58 HLLIFAFVIALPALAFSSYVLSRFAHSEREQFDLRLIQTASDLAADIDRDLQAMLVTVKTLSTSRALRTGAFEDFFLQSEESVAGTDLRVGLLTPGLDQVFTTLRPFGTILPRPNDVSTLAKALQSKAPQISDMVIGSVSGIPAFNVVFPVVD-NGKVQHLIRLGFDADRLAKLLQAQDLSPGWVTGVTDRQGIVIARSHGQTSFVGQPMPSALQQRSQETRRVFEATNLEGRKVLRAVVRIPTSGWIVAATVDLPTVNSASSKAWWTLTLGGSGLLALAAL---LAALYARGLASGLSRAAASARALGRGESVARTPTSLI 1011
            +L++FA  ++LP L  S + L R A  E  Q D R++    +LA D+D++L   +VT++TL+ S  L +G    F  Q+  +       + LL     Q+  TL  +GT LP   + +T  + +++  PQ+S +  GS++G+  FNV  PV D + +V++++ + F A  ++ +L      PGW++GVTD+ GI++ARS     +VG+P+P+ L +R++    V++ATN+ G  +LR+  R   +GW V+    L  V +     W +  +G + L+    L   LA  +   +A  L  A   A+++ + E +  T TSLI
Sbjct:   50 YLVLFALALSLPLLCVSVFGLHRMASIEEAQTDNRIVAFVQNLAVDVDKELDRAIVTLETLANSSELSSGNLRGFHNQALITSRPRKAAIVLLDKSYRQLVDTLSDYGTPLPPTAEPATAKRVIETGRPQVSGVFKGSINGLYIFNVEIPVFDADRQVKYVLMMSFRASYISDILNEIHYPPGWISGVTDQNGIILARSDRPEEYVGKPLPTELFERTKAGEGVYQATNIAGIPILRSTARSKHAGWYVSLGAPLTYVQA---PRWRSYAIGAAVLVTAVVLGWALAYFFGLLMARPLDEATRIAKSVSQNEIIEPTTTSLI 368          
BLAST of mRNA_P-wetherbeei_contig18065.1.1 vs. uniprot
Match: A0A512DYT0_9PROT (Uncharacterized protein n=2 Tax=Skermanella aerolata TaxID=393310 RepID=A0A512DYT0_9PROT)

HSP 1 Score: 155 bits (392), Expect = 2.740e-38
Identity = 112/310 (36.13%), Postives = 166/310 (53.55%), Query Frame = 1
Query:   61 LLIFAFVIALPALAFSSYVLSRFAHSEREQFDLRLIQTASDLAADIDRDLQAMLVTVKTLSTSRALRTGAFEDFFLQSEESVAGTDLRVGLLTPGLDQVFTTLRPFGTILPRPNDVSTLAKALQSKAPQISDMVIGSVSGIPAFNVVFPVVDNGKVQHLIRLGFDADRLAKLLQAQDLSPGWVTGVTDRQGIVIARSHGQTSFVGQPMPSALQQRSQETRRVFEAT-NLEGRKVLRAVVRIPTSGWIVAATVDLPTVNSASSKAWWTLTL--GGSGLLALAALLAALY-ARGLASGLSRAAASARALGRG 978
            L++      +P L FS+ +L +    ER   + ++   A  L  DIDR+L  +L   + L+ S +L TG F  F+  + E     D  + +      Q+  T  P+G  LPR        +A++++ PQIS+++ G+VS  P   VV PV+ N +V +L+ L    +RL  +L A  L PGW+ G+ DR G+VIARS G   FVG  +P+    R ++  +  + T NLEG   L+A  R   SGW+V  +V    V   S +  WTLTL  GG GLL L  LL A+Y +R LA  +++ + SARALG G
Sbjct:   24 LILLVIACIVPPLLFSAALLIQNTRDERVATEAQVTDRARLLGDDIDRELARILAVGEVLALSESLDTGDFASFYRYATEVRDLLDTNILIRDISSQQLVNTRLPWGAPLPRNPVFDVDLRAIETRRPQISNLLTGAVSRTPLLIVVIPVMRNDQVSYLLSLTLSLERLQSILSADRLPPGWLAGLIDRDGVVIARSKGADEFVGTSVPADTWIRIKDFPKGIDRTGNLEGILSLQAYHRSQASGWLVGVSVPESLV---SVQPRWTLTLFAGGGGLLFLIGLLVAVYLSRILAQSITQLSDSARALGEG 330          
BLAST of mRNA_P-wetherbeei_contig18065.1.1 vs. uniprot
Match: UPI000FFC828F (PAS domain S-box protein n=1 Tax=Methylobacterium crusticola TaxID=1697972 RepID=UPI000FFC828F)

HSP 1 Score: 151 bits (381), Expect = 8.290e-37
Identity = 115/338 (34.02%), Postives = 172/338 (50.89%), Query Frame = 1
Query:   58 HLLIFAFVIALPALAFSSYVLSRFAHSEREQFDLRLIQTASDLAADIDRDLQAMLVTVKTLSTSRALRTGAFEDFFLQSEESVAGTDLRVGLLTPGLDQVFTTLRPFGTILP---RPNDVSTLAKALQSKAPQISDMVIGSVSGIPAFNVVFPVVDNGKVQHLIRLGFDADRLAKLLQAQDLSPGWVTGVTDRQGIVIARSHGQTSFVGQPMPSALQQRSQETRRVFEATNLEGRKVLRAVVRIPTSGWIVAATVDLPTVNSASSKAWWTLTLGGSGLLALAA---LLAALYARGLASGLSRAAASARALGRGESVARTPTSLISEVDSISDELVTAS 1053
            +L+  A  +  P L F++ +L R+A  ER +F+    ++   +A  IDRD+  ++  ++TL+++  LR G FE F  Q+      T L + L  P   Q+  T  P G  LP   +P D   +A    S+ P ++    G     P + V  PV  +G V  ++ L     RL ++L A D +PGWVTG+ DR GI++ARS    +  GQPM SAL+ R   +  ++E  + + R VL    R   +GW V A++   TV +   +  W L  GG GLLALA    L   L+AR +A  L + AA+  AL  G+ V R  T  I E+  + D L  AS
Sbjct:   19 YLVALAIALIGPGLIFTAVLLGRYAALERTRFEQDARESVRGIALTIDRDIAGLVSVLQTLASTPRLREGGFEGFERQARAVQDTTGLNLALRRPDGTQIVNTALPAGAPLPLDPQPYDAEIVA----SRRPLVTGAQAGPAGQPPTYAVAVPVTADGAVASILSLTVPVARLHQIL-AHDPAPGWVTGIVDRAGILLARSEDHAALAGQPMLSALRGRPAGSESIWEGLDRQRRPVLFVETRTRITGWTVGASIPKKTVEAPLQR--WVLAFGGFGLLALAVSSVLAVRLWAR-VAEPLGQLAAAGGALASGQPVPRVSTP-IREIRQLGDVLADAS 347          
BLAST of mRNA_P-wetherbeei_contig18065.1.1 vs. uniprot
Match: UPI0013765B8A (PAS domain-containing protein n=1 Tax=Microvirga arsenatis TaxID=2692265 RepID=UPI0013765B8A)

HSP 1 Score: 145 bits (367), Expect = 4.290e-35
Identity = 106/328 (32.32%), Postives = 165/328 (50.30%), Query Frame = 1
Query:   76 FVIALPALAFSSYVLSRFAHSEREQFDLRLIQTASDLAADIDRDLQAMLVTVKTLSTSRALRTGAFEDFFLQSEESVAGTDLRVGLLTPGLDQVFTTLRPFGTILPRPNDVSTLAKALQSKAPQISDMVIGSVSGIPAFNVVFPVVDNGKVQHLIRLGFDADRLAKLLQAQDLSPGWVTGVTDRQGIVIARSHGQTSFVGQPMPSALQQR-SQETRRVFEATNLEGRKVLRAVVRIPTSGW-IVAATVDLPTVNSASSKAWWTLTLGGSGLLALAALLAALYARGLASGLSRAAASARALGRGESVARTPTSLISEVDSISDELVTAS 1053
            FV+ALP +  ++  L     +ERE  DLR+  TA  L+  +DR++   ++ ++ L+ S  L  G FE F+ Q +E+       V L  PG   +F T  P+G  LP  N    L K  +++AP +SD+ +GS++G     V  PVV    V +++ L    D    +L+ Q L+  W   V DR   ++ARS     F+GQP  + +Q+  +     + ++  LEG  V     R P  GW  + +  D     SA     W ++L G  L AL  +LAA+ +R +A  +    A+A+ALGRGE V+   T+ + E D+I   L  AS
Sbjct:   35 FVLALPTILVAAGGLYSSYRAERESVDLRMQDTARALSLLLDREIDKSVLALRILAQSPVLAEGNFEGFYRQVKEAGLVHPSWVALFEPGGRTIFNTRVPYGVRLPDSNRPDVLRKVQETRAPHVSDLFVGSLTGQRLITVDVPVVLGESVAYILSLAIAPDIFQAILREQRLAESWNAAVLDRSNRIVARSRAPERFIGQPASTYVQEALASAPEGILQSVTLEGIPVRTYFSRSPAYGWSFIISIPDAELAKSARRSLLWLVSLLGVVLGAL--VLAAVLSRSIARPVDELVAAAQALGRGEEVSDRATTRVLEFDTIKKALGEAS 360          
BLAST of mRNA_P-wetherbeei_contig18065.1.1 vs. uniprot
Match: A0A2B8B717_9PROT (Histidine kinase n=2 Tax=Azospirillum palustre TaxID=2044885 RepID=A0A2B8B717_9PROT)

HSP 1 Score: 135 bits (341), Expect = 1.680e-31
Identity = 95/312 (30.45%), Postives = 154/312 (49.36%), Query Frame = 1
Query:   46 TLHRHLLIFAFVIALPALAFSSYVLSRFAHSEREQFDLRLIQTASDLAADIDRDLQAMLVTVKTLSTSRALRTGAFEDFFLQSEESVAGTDLRVGLLTPGLDQVFTTLRPFGTILPRPNDVSTLAKALQSKAPQISDMVIGSVSGIPAFNVVFPVVDNGKVQHLIRLGFDADRLAKLLQAQDLSPGWVTGVTDRQGIVIARSHGQTSFVGQPMPSALQQRSQE-TRRVFEATNLEGRKVLRAVVRIPTSGWIVAATVDLPTVNSASSKAWWTLTLGGSGLLALAALLAALYARGLASGLSRAAASARALGRG 978
            +L   L++   V+A+P + FS  +L R  + + E  +  +   A  LA D+DR++  ++   + L+TS +L  G F  F+ ++ E        V L      Q+  +  P+GT LP     +   +A+ ++ PQ+S +++G V+  P   VV PV+ +G V+ L+ L    +RL  ++    L  GW  GV D  G VIARSH    FVG+ +P++L    ++ +  V  A NLEG    +A  R  +SGW+VA +V    +   +         GG GL  +    A    R L   + R A +A+ALG G
Sbjct:   19 SLRSWLVLLVTVVAVPLVVFSGVLLVRTVNVQTETVERLVRDRAHLLAEDVDREVARLVAAAEVLATSESLAAGDFATFYRRAVEVRDRLGTNVVLRDLNSQQIVNSRVPWGTALPVNTGFTADQRAIATRKPQVSGLIMGGVTQAPLLIVVTPVIRDGDVRFLLSLTITQERLQAIVSPDRLPAGWRAGVIDEDGTVIARSHLAEQFVGKRLPTSLWDGMRDPSEGVHRAVNLEGTTAFQAFSRSRSSGWVVATSVPQSLIEEPARGTLLLFAGGGLGLFLIGIGAAVWLGRRLIRPVMRLAEAAKALGVG 330          
BLAST of mRNA_P-wetherbeei_contig18065.1.1 vs. uniprot
Match: M2ZB44_9PROT (Histidine kinase n=1 Tax=Magnetospirillum caucaseum TaxID=1244869 RepID=M2ZB44_9PROT)

HSP 1 Score: 128 bits (321), Expect = 4.300e-29
Identity = 110/341 (32.26%), Postives = 161/341 (47.21%), Query Frame = 1
Query:   61 LLIFAFVIALPALAFSSYVLSRFAHSEREQFDLRLIQTASDLAADIDRDLQAMLVTVKTLSTSRALRTGAFEDFFLQSEESVA--GTDLRVGLLTPGLDQVFTTLRPFGTILPRPNDVSTLAKALQSKAPQISDMVIGSVSGIPAFNVVFPVVDNGKVQHLIRLGFDADRLAKLLQAQDLSPGWVTGVTDRQGIVIARSHGQTSFVGQPMPSALQQRSQETRRVFEATN-LEGRKVLRAVVRIPTSGWIVAATV-------DLPTVNSASSKAWWTLTLGGSGLLALAALLAALYARGLASGLSRAAASARALGRGESVARTPTSLISEVDSISDELVTAS 1053
            L++   V  LP++     ++  F + +R   +  ++QTA  L   +DR++   + T++TL+TS  L       F+ Q+   +   G D  + L      QV    RPFG  LPR      +AK   S  P ISD+ IG V       V  PV  NGKV + + +    + L  LL  Q L PGW+ G+ D +GI++AR+H    F+GQ     L +R +++++     N LEG  V  A  R   S W VA  V       +L       S +   LT+GG GL   A ++     R + S +    A A ALG G  V +TP   I EVD ++  LVTAS
Sbjct:   30 LVLLVVVCLLPSILAVGLLIHDFYNRQRRLLEQNMVQTAHALVLAVDREIARRVATLQTLATSPHLANDDLASFYEQARAILRDQGGD-NIVLSDASAQQVLNLTRPFGAPLPRHGSPEQIAKVFASGQPAISDLFIGGVRKRYLITVDVPVWKNGKVAYTLSMALLPENLGHLLTEQQLPPGWIAGIFDSRGIIVARTHLPEKFIGQGGSPILVERMRQSQKGLSENNTLEGIPVYGAFSRGSLSQWSVAVGVPKQVLLAELRNSILLVSASALALTIGGLGL---AWMIGGRIRRSMRSLI----APALALGAGTDV-QTPRQNIQEVDEVAAALVTAS 361          
BLAST of mRNA_P-wetherbeei_contig18065.1.1 vs. uniprot
Match: A0A5B2VD14_9HYPH (Histidine kinase n=1 Tax=Salinarimonas soli TaxID=1638099 RepID=A0A5B2VD14_9HYPH)

HSP 1 Score: 129 bits (323), Expect = 4.340e-29
Identity = 95/325 (29.23%), Postives = 156/325 (48.00%), Query Frame = 1
Query:   82 IALPALAFSSYVLSRFAHSEREQFDLRLIQTASDLAADIDRDLQAMLVTVKTLSTSRALRTGAFEDFFLQSEESVAGTDLRVGLLTPGLDQVFTTLRPFGTILPRPNDVSTLAK-ALQSKAPQISDMVIGSVSGIPAFNVVFPVVDNGKVQHLIRLGFDADRLAKLLQAQDLSPGWVTGVTDRQGIVIARSHGQTSFVGQPMPSALQQRSQETRRVFEATNLEGRKVLRAVVRIPTSGWIVAATVDLPTVNSASSKAWWTLTLGGSGLLALAALLAALYARGLASGLSRAAASARALGRGESVARTPTSLISEVDSISDELVTAS 1053
            + +P L F   +L  +A +ER + +      A  L   +DR++  +   ++ L+TS +L  G    F+ Q+ +    T + + L       V TT  P+G  +   + +    +  L++    +SD   G VS +P   V+ PVV  G + +L+   F  DR+A  L  + L  GW+ G+ DRQG+++AR+    +  G+P P+ LQ R+      +  TN +G   L A  R P +GW  A +V    V +   ++   +   G GL  LA  L+ L +R +A  +     +A A+  GE+VA   T L +EVD I   L  AS
Sbjct:   26 LVIPTLVFVGVLLWHYAAAERARVEEEARSAARSLQVAVDREIVGIEGMLEALATSPSLAAGDLPTFYRQARQLFDRTGIHISLRNTQGVIVLTTRVPYGGTIEASHLLRDADREVLRTGKTSVSDAFSGQVSHMPTIQVINPVVREGGIAYLLGASFHLDRMAGALARETLPEGWIGGLIDRQGVLLARTRDHEAHAGRPAPAGLQARAVGHSGTYMGTNPDGSSALAAYARSPLTGWYTAVSVPGDMVQAPLRRSLLQIVGLGLGLGGLAIALSLLVSRRIAGAVGALRDAAAAIRLGEAVAPVATDL-AEVDDIGRALAAAS 349          
BLAST of mRNA_P-wetherbeei_contig18065.1.1 vs. uniprot
Match: A0A6N1AIR0_9PROT (Histidine kinase n=2 Tax=Azospirillum oryzae TaxID=286727 RepID=A0A6N1AIR0_9PROT)

HSP 1 Score: 128 bits (322), Expect = 5.300e-29
Identity = 94/312 (30.13%), Postives = 158/312 (50.64%), Query Frame = 1
Query:   61 LLIFAFVIALPALAFSSYVLSRFAHSEREQFDLRLIQTASDLAADIDRDLQAMLVTVKTLSTSRALRTGAFEDFFLQSEE--SVAGTDLRVGLLTPGLDQVFTTLRPFGTILPRPNDVSTLAKALQSKAPQISDMVIGSVSGIPAFNVVFPVVDNGKVQHLIRLGFDADRLAKLLQAQDLSPGWVTGVTDRQGIVIARSHGQTSFVGQPMPSALQQRSQETRR-VFEATNLEGRKVLRAVVRIPTSGWIVAATVDLPTVNSASSKAWWTLTLGGSGLLALAALLAALYARGLASGLSRAAASARALGRGESV 987
            L++      +P + FS+ +L R    E  Q +  +   A  LA DIDR++  ++   + L+T+  L  G    F+ ++ +   + GT++ +  LT    Q+  T  P+GT LPR        +A++++ PQ+S ++IG+V+  P   VV PVV +G+V +L+ L    +RL  ++  + L  GWV G+ D  G++IARS     F G  +P  +  R +     V    +LEG+  L+A  R   SGW+V  +V    V + S +       GG  LL  A   AA+  R L   + +   +A A+GRG+++
Sbjct:   24 LVLLVLACVMPLVLFSTALLLRNTAIETVQTEQLVRDRADQLAEDIDREVARLIAAGEVLATAETLARGDLATFYRRAIQVRDLLGTNILIRDLTS--QQLLNTRVPWGTPLPRNPAFEIDKRAIETRRPQVSGLLIGAVARTPLLIVVVPVVHSGEVHYLLSLTVALERLQAIVAPERLPTGWVAGILDGDGVLIARSAKPEQFTGTRLPGEVWDRIRSVPGGVHRTFDLEGKAALQAYTRSQASGWLVGVSVREELVAAPSRQTLLLFVAGGLVLLLAALGGAAMLGRRLTRPVLQLVHAAEAIGRGQTL 333          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18065.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6N7F7T5_9PROT1.550e-4632.35HWE_HK domain-containing protein n=1 Tax=Alphaprot... [more]
A0A5H2Z6I0_9BRAD9.000e-4535.13Sensor histidine kinase n=1 Tax=Bradyrhizobium sp.... [more]
UPI001BA7015C1.220e-3931.37sensor histidine kinase n=1 Tax=Bradyrhizobium jic... [more]
A0A512DYT0_9PROT2.740e-3836.13Uncharacterized protein n=2 Tax=Skermanella aerola... [more]
UPI000FFC828F8.290e-3734.02PAS domain S-box protein n=1 Tax=Methylobacterium ... [more]
UPI0013765B8A4.290e-3532.32PAS domain-containing protein n=1 Tax=Microvirga a... [more]
A0A2B8B717_9PROT1.680e-3130.45Histidine kinase n=2 Tax=Azospirillum palustre Tax... [more]
M2ZB44_9PROT4.300e-2932.26Histidine kinase n=1 Tax=Magnetospirillum caucaseu... [more]
A0A5B2VD14_9HYPH4.340e-2929.23Histidine kinase n=1 Tax=Salinarimonas soli TaxID=... [more]
A0A6N1AIR0_9PROT5.300e-2930.13Histidine kinase n=2 Tax=Azospirillum oryzae TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18065contigP-wetherbeei_contig18065:15..1067 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog670292.JH26_20905
PFAMsHWE_HK,PAS_9
Model size1053
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue3.02e-36
EggNOG OGsCOG3290@1|root,COG3920@1|root,COG3290@2|Bacteria,COG3920@2|Bacteria,1R8KX@1224|Proteobacteria,2U4YS@28211|Alphaproteobacteria,1JYYZ@119045|Methylobacteriaceae
DescriptionHWE histidine kinase
Cds size1053
COG categoryT
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186135.3665576-CDS-P-wetherbeei_contig18065:14..10671683186135.3665576-CDS-P-wetherbeei_contig18065:14..1067Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18065 15..1067 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18065.1.1prot_P-wetherbeei_contig18065.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18065 15..1067 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18065.1.1

>prot_P-wetherbeei_contig18065.1.1 ID=prot_P-wetherbeei_contig18065.1.1|Name=mRNA_P-wetherbeei_contig18065.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=351bp
MVRLSELLQGRWPALTLHRHLLIFAFVIALPALAFSSYVLSRFAHSEREQ
FDLRLIQTASDLAADIDRDLQAMLVTVKTLSTSRALRTGAFEDFFLQSEE
SVAGTDLRVGLLTPGLDQVFTTLRPFGTILPRPNDVSTLAKALQSKAPQI
SDMVIGSVSGIPAFNVVFPVVDNGKVQHLIRLGFDADRLAKLLQAQDLSP
GWVTGVTDRQGIVIARSHGQTSFVGQPMPSALQQRSQETRRVFEATNLEG
RKVLRAVVRIPTSGWIVAATVDLPTVNSASSKAWWTLTLGGSGLLALAAL
LAALYARGLASGLSRAAASARALGRGESVARTPTSLISEVDSISDELVTA
S
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mRNA from alignment at P-wetherbeei_contig18065:15..1067-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18065.1.1 ID=mRNA_P-wetherbeei_contig18065.1.1|Name=mRNA_P-wetherbeei_contig18065.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1053bp|location=Sequence derived from alignment at P-wetherbeei_contig18065:15..1067- (Phaeothamnion wetherbeei SAG_119_79)
ATGGTGAGACTGTCGGAATTGCTCCAGGGCCGTTGGCCTGCGTTGACACT GCATCGCCACTTGTTGATCTTCGCCTTCGTTATCGCCCTGCCGGCATTGG CATTCTCGAGCTATGTGCTGTCGCGTTTCGCACACTCCGAGCGCGAACAA TTCGATCTGCGGCTGATCCAAACGGCCTCGGATCTCGCCGCCGACATCGA CCGTGACCTTCAAGCGATGCTGGTTACCGTGAAGACGCTGTCAACCTCCC GCGCTCTGAGAACTGGTGCCTTCGAGGACTTCTTTCTGCAATCGGAAGAG TCCGTGGCTGGCACAGATCTGCGCGTCGGACTGTTGACCCCCGGATTGGA TCAGGTTTTCACTACGCTCCGCCCATTCGGGACGATCCTGCCGCGCCCCA ACGATGTATCTACCCTTGCCAAAGCGCTTCAATCGAAAGCACCGCAGATT TCCGACATGGTCATCGGGTCAGTCTCGGGCATTCCTGCATTCAATGTGGT CTTTCCAGTTGTTGACAACGGTAAGGTTCAGCATCTGATCCGGCTTGGAT TCGACGCCGACAGACTGGCGAAGCTGTTGCAAGCTCAGGACTTGTCTCCC GGCTGGGTCACAGGAGTTACCGATCGTCAAGGCATCGTCATCGCCCGCTC CCATGGCCAGACTTCGTTTGTAGGGCAACCGATGCCCTCCGCGCTGCAGC AGCGCAGCCAGGAGACCCGAAGAGTATTCGAAGCGACCAATCTCGAAGGC CGCAAAGTGCTGCGCGCCGTAGTGCGGATTCCGACCAGTGGTTGGATCGT TGCGGCGACGGTCGATCTGCCAACGGTCAATTCGGCATCCAGCAAGGCCT GGTGGACTTTGACGTTGGGGGGAAGTGGGCTGCTGGCGCTGGCAGCGCTA CTCGCCGCACTTTACGCGCGAGGCCTCGCCAGCGGGTTGTCTCGTGCCGC AGCTTCCGCCCGAGCGTTGGGGCGGGGCGAGTCCGTTGCTCGGACGCCTA CAAGCCTGATATCGGAAGTCGATAGCATCAGCGACGAACTCGTCACAGCC TCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18065:15..1067-

>mRNA_P-wetherbeei_contig18065.1.1 ID=mRNA_P-wetherbeei_contig18065.1.1|Name=mRNA_P-wetherbeei_contig18065.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1053bp|location=Sequence derived from alignment at P-wetherbeei_contig18065:15..1067- (Phaeothamnion wetherbeei SAG_119_79)
ATGGTGAGACTGTCGGAATTGCTCCAGGGCCGTTGGCCTGCGTTGACACT
GCATCGCCACTTGTTGATCTTCGCCTTCGTTATCGCCCTGCCGGCATTGG
CATTCTCGAGCTATGTGCTGTCGCGTTTCGCACACTCCGAGCGCGAACAA
TTCGATCTGCGGCTGATCCAAACGGCCTCGGATCTCGCCGCCGACATCGA
CCGTGACCTTCAAGCGATGCTGGTTACCGTGAAGACGCTGTCAACCTCCC
GCGCTCTGAGAACTGGTGCCTTCGAGGACTTCTTTCTGCAATCGGAAGAG
TCCGTGGCTGGCACAGATCTGCGCGTCGGACTGTTGACCCCCGGATTGGA
TCAGGTTTTCACTACGCTCCGCCCATTCGGGACGATCCTGCCGCGCCCCA
ACGATGTATCTACCCTTGCCAAAGCGCTTCAATCGAAAGCACCGCAGATT
TCCGACATGGTCATCGGGTCAGTCTCGGGCATTCCTGCATTCAATGTGGT
CTTTCCAGTTGTTGACAACGGTAAGGTTCAGCATCTGATCCGGCTTGGAT
TCGACGCCGACAGACTGGCGAAGCTGTTGCAAGCTCAGGACTTGTCTCCC
GGCTGGGTCACAGGAGTTACCGATCGTCAAGGCATCGTCATCGCCCGCTC
CCATGGCCAGACTTCGTTTGTAGGGCAACCGATGCCCTCCGCGCTGCAGC
AGCGCAGCCAGGAGACCCGAAGAGTATTCGAAGCGACCAATCTCGAAGGC
CGCAAAGTGCTGCGCGCCGTAGTGCGGATTCCGACCAGTGGTTGGATCGT
TGCGGCGACGGTCGATCTGCCAACGGTCAATTCGGCATCCAGCAAGGCCT
GGTGGACTTTGACGTTGGGGGGAAGTGGGCTGCTGGCGCTGGCAGCGCTA
CTCGCCGCACTTTACGCGCGAGGCCTCGCCAGCGGGTTGTCTCGTGCCGC
AGCTTCCGCCCGAGCGTTGGGGCGGGGCGAGTCCGTTGCTCGGACGCCTA
CAAGCCTGATATCGGAAGTCGATAGCATCAGCGACGAACTCGTCACAGCC
TCG
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