mRNA_P-wetherbeei_contig18058.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18058.1.1 vs. uniprot
Match: A0A835Z5W3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5W3_9STRA) HSP 1 Score: 196 bits (499), Expect = 6.470e-58 Identity = 112/225 (49.78%), Postives = 136/225 (60.44%), Query Frame = 1
Query: 1 TADGYEQLFAVNFLGHFRLTLRLLDLLEASAXXXXXXXXXXXXXXXGVSGRIVNLASVMHRFGTTAWETSATGNKVGGAFSSSYSDSKLAMVLFTQELRRRFRTKGSLATAIAVNPGAVRSDIWRAMPRPIRPVFQLLSWLMFLDADQGSYTSVCAAALPTARLL----PEYVQPYWLPFGFAHPFELMGPFVGCRTAAPSLPPEPEAGAARLWEVCERLIAAAE 663
T G +FA NF+GHF LT L D + A+ R+VNLAS+MH +G WE + GN FSS Y SKLAMVLF+QELRRRFR G AT+ AVNPGAVRSDIWR +P P + V+ + FL+ +QG++TSV AAA P L P Y QPY LP G AHPFE+ GPFVG AAP++PP+ E ARLWE C R++ AAE
Sbjct: 155 TKQGLGLVFASNFVGHFLLTKLLQDTITATP-----------------GARVVNLASLMHHYGRVDWERACWGNDDWKGFSS-YQASKLAMVLFSQELRRRFRRAGGTATSFAVNPGAVRSDIWRFVPPPFKYVYDAVMRAGFLNVEQGAFTSVYAAAAPLDALGGPDGPLYWQPYLLPLGLAHPFEVAGPFVGATAAAPAVPPDHEREGARLWEECTRMVEAAE 361
BLAST of mRNA_P-wetherbeei_contig18058.1.1 vs. uniprot
Match: D8LBW3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBW3_ECTSI) HSP 1 Score: 195 bits (495), Expect = 2.260e-57 Identity = 108/225 (48.00%), Postives = 140/225 (62.22%), Query Frame = 1
Query: 1 TADGYEQLFAVNFLGHFRLTLRLLDLLEASAXXXXXXXXXXXXXXXGVSGRIVNLASVMHRFGTTAWETSATGNKVGGAFSSSYSDSKLAMVLFTQELRRRFRTKGSLATAIAVNPGAVRSDIWRAMPRPIRPVFQLLSWLMFLDADQGSYTSVCAAALPTARLLPE-YVQPYWLPFGFAHPFELMGPFVGCRTAAPSLPPEPEAGAARLWEVCERLIAAAEAKR 672
TADG + +F VNF+GHF LT LL L++++ + R+V L+SVMH G T WE++ G+ S+Y+DSKLAMV+F +EL++RF GS ATA+AVNPGAVRSDIWR +P+ + PVF L +FL ++QGSYTSV AAALP + Y QPYW+PF PFE+ GPFVGC P L + A + LW CER+I AA A R
Sbjct: 160 TADGLDLVFGVNFVGHFCLTNELLPLIQSTP-----------------AARVVCLSSVMHHSGGTDWESAVMGHPKRRG--STYADSKLAMVIFAKELKKRFAAAGSSATAVAVNPGAVRSDIWRNVPKLVMPVFDLFMRFLFLTSEQGSYTSVRAAALPLETVSGSGYYQPYWMPFKRPLPFEVFGPFVGCAPGLPKLVKDEPAATSALWTTCERVIEAAGAAR 365
BLAST of mRNA_P-wetherbeei_contig18058.1.1 vs. uniprot
Match: A0A835ZF30_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF30_9STRA) HSP 1 Score: 154 bits (389), Expect = 1.460e-41 Identity = 91/235 (38.72%), Postives = 121/235 (51.49%), Query Frame = 1
Query: 1 TADGYEQLFAVNFLGHFRLTLRLLDLLEASAXXXXXXXXXXXXXXXGVSGRIVNLASVMHRFGTTAWETSATGNKVGGAFSS----SYSDSKLAMVLFTQELRRRFRTKGSLATAIAVNPGAVRSDIWRAMPRPIRPVFQLLSWLMFLDADQGSYTSVCAAALPTARL----------LPEYVQPYWLPFGFAHPFELMGPFVGCRTAAPSLPPEPEAGAARLWEVCERLIAAAE 663
T G F ++LG + +T L D + + R++N++S +H +GTT WE +A G + F + Y+DSKLAM+LFT ELRRRF A AI V+PG V SDIWR +P P+ +++ +FL DQ + SV AAA P L LP Y+QPYW P AHPF++ GP+ G + PSLPP E RLW V LI AAE
Sbjct: 151 TDQGLSSTFMADYLGAYMMTTMLYDTIRNTQ-----------------GARVINVSSPLHHYGTTKWEDAAMGRRGEPDFMNVLFHCYADSKLAMMLFTNELRRRFAADNCSAVAICVSPGNVNSDIWRTVPIPLLMPMKVVMAAVFLTPDQACHPSVMAAAAPLNELKGFMAKDAEELPLYLQPYWNPLKQAHPFDVFGPYAGTDVSIPSLPPNYEEEGKRLWFVSSELIKAAE 368
BLAST of mRNA_P-wetherbeei_contig18058.1.1 vs. uniprot
Match: A0A7S3Y5K9_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5K9_HETAK) HSP 1 Score: 130 bits (327), Expect = 1.290e-32 Identity = 85/217 (39.17%), Postives = 119/217 (54.84%), Query Frame = 1
Query: 1 TADGYEQLFAVNFLGHFRLTLRLLDLLEASAXXXXXXXXXXXXXXXGVSGRIVNLASVMHRFGTTAWETSATGNKVGGAFSSSYSDSKLAMVLFTQELRRRFRTKGSLATAIAVNPGAVRSDIWRAMPRPIRPVFQLLSWLMFLDADQGSYTSV-CAAALPTARLLPEYVQPYWLPFGFAHPFELMGPFVGCRTAAPSLPPEPEAGAARLWEVCERL 648
T G +++F VNFLGHF LT+ LL+ L+ + RI+N++SV+HRF + + A+ N + + Y +SKLAMVLFT+ELRRR KG+ +A AV+PGAVRS+IWR+ R +FLD DQG+ S+ CAAA P A Y PY PFE++GP+ G + PSLP +A LW++ R+
Sbjct: 148 TKQGLDEVFGVNFLGHFLLTILLLEKLKNNFR----------------GARIINVSSVVHRFSPSKPDFEASANGMDKMHN--YQNSKLAMVLFTKELRRRL--KGTQVSAYAVSPGAVRSEIWRSWRGLPRAALNAAMAALFLDTDQGAAPSIHCAAAPPAALGTHLYHCPYLTAPACPLPFEMLGPYAGALPSRPSLPDNEPEISADLWKLSCRI 344
BLAST of mRNA_P-wetherbeei_contig18058.1.1 vs. uniprot
Match: L1JAQ5_GUITC (Uncharacterized protein n=3 Tax=Guillardia theta TaxID=55529 RepID=L1JAQ5_GUITC) HSP 1 Score: 115 bits (289), Expect = 2.260e-27 Identity = 79/225 (35.11%), Postives = 114/225 (50.67%), Query Frame = 1
Query: 1 TADGYEQLFAVNFLGHFRLTLRLLDLLEASAXXXXXXXXXXXXXXXGVSGRIVNLASVMHRFGTTAWETSATGNKVGGAFSSSYSDSKLAMVLFTQELRRRFRTKGSLATAIAVNPGAVRSDIWRAMPRP---IRPVFQLLSWLMFLDADQGSYTSVCAAALPTARL----LPEYVQPYWLPFGFAHPFELMGPFVGCRTAAPSLPPEPEAGAARLWEVCERLIA 654
T G +F NF+GHF LT L L S GRIVNL+SVMH +G+ + + K + Y +SKLAMV T EL+R++ + +++AVNPG V SDIWR + RP + +F+L ++ LD QG+ TSV AA + + +P Y+ PYW+P PFE+MG F G + P + + + LW+ C +L A
Sbjct: 120 TPQGIPFIFGTNFVGHFLLTRLLHPNLSKSG-----------------GGRIVNLSSVMHHWGSKDVSKAVSSGK----YPRQYQNSKLAMVHLTAELQRQYAE--TRVSSVAVNPGFVASDIWRGI-RPDSLVGRMFRLAMAVLALDTKQGAATSVAAACMSDEEICGSKVPLYLVPYWVPSFARLPFEMMGVFTGVHSCPPRVSKNEKQISMELWKECTKLCA 320
BLAST of mRNA_P-wetherbeei_contig18058.1.1 vs. uniprot
Match: A0A7S0QNP4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QNP4_9CRYP) HSP 1 Score: 115 bits (288), Expect = 3.460e-27 Identity = 82/187 (43.85%), Postives = 102/187 (54.55%), Query Frame = 1
Query: 1 TADGYEQLFAVNFLGHFRLTLRLLDLLEASAXXXXXXXXXXXXXXXGVSGRIVNLASVMHRFGTTAWETSATGNKVGGAFSSSYSDSKLAMVLFTQELRRRFRTKGSLATAIAVNPGAVRSDIWR---AMPRPIRPVFQLLSWLMFLDADQGSYTSVCAAALPTARLLPE--YVQPYWLPFGFAHPF 546
TA G E +F NF+G F LTL L+DLL+ASA +GRIVNL+S++HRF + SA+G S Y DSKLAMVLFT+ELRRR G+ A AVNPG V SDI R A+P I +F+ L +QG+ S AAA P + Y+QPY+LP G PF
Sbjct: 167 TAQGIEIIFGTNFVGPFALTLLLMDLLKASA-----------------AGRIVNLSSILHRFASRDVARSASGENE----SHGYEDSKLAMVLFTRELRRRLA--GTRVVATAVNPGVVASDIGRVIHALPI-IGALFRAFCSAFALTVEQGAAVSAAAAAAPRPAGEEDGLYLQPYFLPLGLGLPF 329
BLAST of mRNA_P-wetherbeei_contig18058.1.1 vs. uniprot
Match: A0A835YP27_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP27_9STRA) HSP 1 Score: 112 bits (281), Expect = 9.860e-26 Identity = 78/231 (33.77%), Postives = 113/231 (48.92%), Query Frame = 1
Query: 1 TADGYEQLFAVNFLGHFRLTLRLLDLLEASAXXXXXXXXXXXXXXXGVSGRIVNLASVMHRFGTTAWETSATGNKVGGAFSSS----YSDSKLAMVLFTQELRRRFRTKGSLATAIAVNPGAVRSDIWRAMPRPIRPVFQLLSWLMFLDADQGSYTSVCAAALPTARLLPE-----YVQPYWLPFGFAHPFELMGPFVGCRTAAPSLPPEPEAGAARLWEVCERLIAAAEA 666
T G + +F V++LGHF LT L D ++A+ R+VN++S++HR+GTT W +ATG + + ++ Y DSKLAM++FTQ SDIWRA+P +R L + FL +QG +TSV AA P L + Y+QPY P PF+++GPF G SLP + +A RLW+ ++ AAEA
Sbjct: 202 TDRGLDYVFTVSYLGHFMLTNLLYDTIKATP-----------------DARVVNVSSLLHRYGTTQWAAAATGKRGSDNYFNALFHVYCDSKLAMMIFTQ------------------------SDIWRAVPLWLRIPLDLFMRVAFLSTEQGCHTSVMAALAPLEALSTDGEPALYLQPYKGPVQ-KRPFDVIGPFGGTVPTTASLPADVKAEGERLWDTSAKIWEAAEA 390
BLAST of mRNA_P-wetherbeei_contig18058.1.1 vs. uniprot
Match: A0A7S4L4F0_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4L4F0_GUITH) HSP 1 Score: 110 bits (276), Expect = 1.050e-25 Identity = 90/238 (37.82%), Postives = 116/238 (48.74%), Query Frame = 1
Query: 7 DGYEQLFAVNFLGHFRLTLRLLDLLEASAXXXXXXXXXXXXXXXGVSGRIVNLASVMHRFGTTAWETSATGNKVGGAFSSSYSDSKLAMVLFTQELRRRFRTKGSLATAIAVNPGAVRSDIWRAMPRPIRPVF---QLLSWLMFLDADQGSYTSVCAAALPT-------------------ARLLPE--YVQPYWLPFGFAHPFELMGPFVGCRTAAPSLPPEPEAGAARLWEVCERL 648
G + +F NF+GHF LTL L +L + GR+VNL+SVMH +GT T +SY DSKLAM+ FT E+ RR+ KG +A AIAVNPG V SDIWR + R + + LS+L A+ G TSV AAA+ R E Y+ PY LP G PFE+MGPF+ R A P LP ++R WE+CE +
Sbjct: 80 QGRDYVFETNFVGHFLLTLCLEGMLRRAR------------------GRVVNLSSVMHHWGTK----DVTRTLKSARRKNSYRDSKLAMLHFTAEISRRW--KGDVA-AIAVNPGFVSSDIWRGVSRQGVKGWLFDRFLSFLALCPAE-GCATSVVAAAMQLNSKEEGKAGGGQASRKKEIQRTRHECLYLVPYVLPAGIRLPFEVMGPFMHPRWATPRLPAGEVEISSRFWEMCEEV 291
BLAST of mRNA_P-wetherbeei_contig18058.1.1 vs. uniprot
Match: L1IMF0_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IMF0_GUITC) HSP 1 Score: 110 bits (276), Expect = 4.180e-25 Identity = 90/238 (37.82%), Postives = 116/238 (48.74%), Query Frame = 1
Query: 7 DGYEQLFAVNFLGHFRLTLRLLDLLEASAXXXXXXXXXXXXXXXGVSGRIVNLASVMHRFGTTAWETSATGNKVGGAFSSSYSDSKLAMVLFTQELRRRFRTKGSLATAIAVNPGAVRSDIWRAMPRPIRPVF---QLLSWLMFLDADQGSYTSVCAAALPT-------------------ARLLPE--YVQPYWLPFGFAHPFELMGPFVGCRTAAPSLPPEPEAGAARLWEVCERL 648
G + +F NF+GHF LTL L +L + GR+VNL+SVMH +GT T +SY DSKLAM+ FT E+ RR+ KG +A AIAVNPG V SDIWR + R + + LS+L A+ G TSV AAA+ R E Y+ PY LP G PFE+MGPF+ R A P LP ++R WE+CE +
Sbjct: 165 QGRDYVFETNFVGHFLLTLCLEGMLRRAR------------------GRVVNLSSVMHHWGTK----DVTRTLKSARRKNSYRDSKLAMLHFTAEISRRW--KGDVA-AIAVNPGFVSSDIWRGVSRQGVKGWLFDRFLSFLALCPAE-GCATSVVAAAMQLNSKEEGKAGGGQASRKKEIQRTRHECLYLVPYVLPAGIRLPFEVMGPFMHPRWATPRLPAGEVEISSRFWEMCEEV 376
BLAST of mRNA_P-wetherbeei_contig18058.1.1 vs. uniprot
Match: A0A7S0KYI1_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0KYI1_9STRA) HSP 1 Score: 109 bits (273), Expect = 5.690e-25 Identity = 86/242 (35.54%), Postives = 116/242 (47.93%), Query Frame = 1
Query: 1 TADGYEQLFAVNFLGHFRLTLRLLDLLEASAXXXXXXXXXXXXXXXGVSGRIVNLASVMHRF---------------GTTAWETSATGNKVGGAFSSSYSDSKLAMVLFTQELRRRFRTKGSLATAIAVNPGAVRSDIWRAMPRPIRPVFQLLSWLMFLDADQGSYTSVCAAALPTARLLPE---YVQPYWLPFGFAHP------FELMGPFVGCRTAAPSLPPE--PEAGAARLWEVCERL 648
T +G + F NFLGHF LT L+ L R++NL+SV H F G + W AT + G SY SKLA +LF+ EL +RF +KG +IAVNPG+V SDIWR PR I P+F+++ +L + QGS TSV AA + + Y+QPY F FE++GP+VG P LP + P++ A LWEV + L
Sbjct: 119 TQEGLDSCFKTNFLGHFLLTNLLMPALLKCQ-----------------GSRVINLSSVTHHFVEEGIGEKEDERGSLGRSWWTKQATYGQSG----ISYRTSKLASILFSIELNKRFGSKG--LQSIAVNPGSVNSDIWRGYPRWIIPIFRMI----YLTSKQGSSTSVAAAVGEFPKAQKDKVVYLQPYRQLFSSKAQKPPFPAFEMLGPYVGYEITTPRLPSDGGPKSAQA-LWEVSQNL 332 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18058.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18058.1.1 >prot_P-wetherbeei_contig18058.1.1 ID=prot_P-wetherbeei_contig18058.1.1|Name=mRNA_P-wetherbeei_contig18058.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=226bp TADGYEQLFAVNFLGHFRLTLRLLDLLEASAAAAAAATGGGGGSGGGVSGback to top mRNA from alignment at P-wetherbeei_contig18058:100..1243- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18058.1.1 ID=mRNA_P-wetherbeei_contig18058.1.1|Name=mRNA_P-wetherbeei_contig18058.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1144bp|location=Sequence derived from alignment at P-wetherbeei_contig18058:100..1243- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18058:100..1243- >mRNA_P-wetherbeei_contig18058.1.1 ID=mRNA_P-wetherbeei_contig18058.1.1|Name=mRNA_P-wetherbeei_contig18058.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=678bp|location=Sequence derived from alignment at P-wetherbeei_contig18058:100..1243- (Phaeothamnion wetherbeei SAG_119_79)back to top |