mRNA_P-wetherbeei_contig18050.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18050.1.1
Unique NamemRNA_P-wetherbeei_contig18050.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18050.1.1 vs. uniprot
Match: A0A2W2ARM2_9HYPH (Peptidase S74 domain-containing protein n=1 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=A0A2W2ARM2_9HYPH)

HSP 1 Score: 156 bits (395), Expect = 1.240e-39
Identity = 85/134 (63.43%), Postives = 100/134 (74.63%), Query Frame = 1
Query:  460 NVGAAGDTAVIRLGRQGTQKKTFIAGIRGTTVSGA-AVVASASGQLGVQSSSRRYKQDIADMGVASDALLKLRPVTFHYKQVDEAGERPLQYGLIAEEVAEVMPALVVRDEHGQPETVAYQTLSSLLLNEYQKQ 858
            N G A +   IR+G QGTQ + F+AG+RG  V+G  AVV   +GQLGV SSSRR+KQDI  MG AS ALL+LRPVTFHY Q +  G  PLQYGL+AEEVAEVMP L + +  G+PE+VAYQ L SLLLNEYQKQ
Sbjct:  460 NPGVAAEANTIRIGVQGTQTRAFLAGVRGVNVTGGQAVVVDVNGQLGVVSSSRRFKQDIQPMGDASAALLRLRPVTFHYNQAEADGSHPLQYGLVAEEVAEVMPGLAIYNAEGKPESVAYQVLPSLLLNEYQKQ 593          
BLAST of mRNA_P-wetherbeei_contig18050.1.1 vs. uniprot
Match: A0A537J219_9BACT (Peptidase S74 domain-containing protein (Fragment) n=1 Tax=Terrabacteria group bacterium ANGP1 TaxID=2569760 RepID=A0A537J219_9BACT)

HSP 1 Score: 139 bits (350), Expect = 2.910e-35
Identity = 81/143 (56.64%), Postives = 94/143 (65.73%), Query Frame = 1
Query:  460 NVGAAGDTAVIRLGRQGTQKKTFIAGIRGTTVSGA-AVVASASGQLGVQSSSRRYKQDIADMGVASDALLKLRPVTFHYKQVDEAGERPLQYGLIAEEVAEVMPALVVRDEHGQPETVAYQTLSSLLLNEYQKQHRDMRALAA 885
            N G AG++  IR+G  G Q  T IAGI G   +G  AV  ++  +LGVQ SSRR K DI DMG AS  LL+LRPVTF YKQ    G RPLQYGLIAEEVAEV P LV  D  GQP+TV Y  L ++LLNE Q+Q R +   AA
Sbjct:  150 NRGVAGESDTIRIGTSGVQVATHIAGIHGEGATGGLAVYVTSDDKLGVQLSSRRVKDDIRDMGAASQGLLRLRPVTFRYKQAGADGARPLQYGLIAEEVAEVSPELVAYDRAGQPQTVLYHALPAMLLNELQRQERQLEGQAA 292          
BLAST of mRNA_P-wetherbeei_contig18050.1.1 vs. uniprot
Match: A0A2V5VGF5_9BACT (Peptidase S74 domain-containing protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V5VGF5_9BACT)

HSP 1 Score: 139 bits (350), Expect = 2.970e-35
Identity = 78/149 (52.35%), Postives = 105/149 (70.47%), Query Frame = 1
Query:  460 NVGAAGDTAVIRLGRQGTQKKTFIAGIRGTTVSGAAVVASASGQLGVQSSSRRYKQDIADMGVASDALLKLRPVTFHYKQVDEAGERPLQYGLIAEEVAEVMPALVVRDEHGQPETVAYQTLSSLLLNEYQKQHRDMRALAAAARDQQQ 906
            N G AG++  IR+GRQG + +TFIAGI GTTVSG+ V  + SGQLGV  SS+R+K+ I  M  AS+A+L L+PVTF YK+  +    P Q+GL+AEEVA+V PALV RD  G+  TV Y+ ++++LLNE+ K+H  +  L A A  QQQ
Sbjct:  139 NPGVAGESDAIRIGRQGIETRTFIAGISGTTVSGSGVFVNGSGQLGVAPSSKRFKEQIKPMDKASEAILALKPVTFRYKEAIDPNGIP-QFGLVAEEVAKVSPALVTRDAKGEVFTVRYEAVNAMLLNEFLKEHGKVEKLEATAAQQQQ 286          
BLAST of mRNA_P-wetherbeei_contig18050.1.1 vs. uniprot
Match: A0A2V6LJ31_9BACT (Peptidase S74 domain-containing protein n=2 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V6LJ31_9BACT)

HSP 1 Score: 137 bits (346), Expect = 2.150e-34
Identity = 80/139 (57.55%), Postives = 99/139 (71.22%), Query Frame = 1
Query:  466 GAAGDTAVIRLGRQGTQKKTFIAGIRGTTVSGAAVVASASGQLGVQSSSRRYKQDIADMGVASDALLKLRPVTFHYK-QVDEAGERPLQYGLIAEEVAEVMPALVVRDEHGQPETVAYQTLSSLLLNEYQKQHRDMRAL 879
            G AG+   IR+G QGTQ  TFIAGI G TV+G AVV ++SGQLGV  SSRR+KQ+I  MG ASD LL LRPVTF YK  VD  G    Q+GL+AEEV +V P LV RD+ G+P TV Y  ++++LLNE+ K+HR +  L
Sbjct:  197 GVAGEHETIRIGEQGTQDATFIAGISGATVTGTAVVVNSSGQLGVAPSSRRFKQNIQTMGDASDILLALRPVTFEYKPDVDPKGVS--QFGLMAEEVEKVNPDLVARDDEGKPYTVRYDAVNAMLLNEFLKEHRKVEQL 333          
BLAST of mRNA_P-wetherbeei_contig18050.1.1 vs. uniprot
Match: UPI0019CA7D3F (Tail fiber domain-containing protein n=1 Tax=Gloeobacterales cyanobacterium ES-bin-313 TaxID=2812629 RepID=UPI0019CA7D3F)

HSP 1 Score: 141 bits (355), Expect = 3.760e-34
Identity = 79/134 (58.96%), Postives = 97/134 (72.39%), Query Frame = 1
Query:  460 NVGAAGDTAVIRLGRQGTQKKTFIAGIRGTTVSGAA-VVASASGQLGVQSSSRRYKQDIADMGVASDALLKLRPVTFHYKQVDEAGERPLQYGLIAEEVAEVMPALVVRDEHGQPETVAYQTLSSLLLNEYQKQ 858
            N+G AG+  VIR+G  GTQ +TFI+GI G T SG   V  +A+GQLG  +SSRR+K+DI ++G  SD LLKLRPV+F YKQ  E GE PLQYGLIAEEVA+V P LV  D+ G+P TV Y  L+ LLL E Q+Q
Sbjct:  391 NLGVAGEGGVIRIGTPGTQTRTFISGINGVTASGGVQVFINANGQLGTLTSSRRFKRDINNLGSLSDRLLKLRPVSFRYKQATEQGEHPLQYGLIAEEVAKVFPELVQYDKEGKPITVYYHLLTPLLLGEVQRQ 524          
BLAST of mRNA_P-wetherbeei_contig18050.1.1 vs. uniprot
Match: UPI00198C72A1 (Tail fiber domain-containing protein n=1 Tax=Gloeobacterales cyanobacterium ES-bin-313 TaxID=2812629 RepID=UPI00198C72A1)

HSP 1 Score: 137 bits (346), Expect = 5.160e-34
Identity = 78/136 (57.35%), Postives = 96/136 (70.59%), Query Frame = 1
Query:  460 NVGAAGDTAVIRLGRQGTQKKTFIAGIRGTTVSGAA-VVASASGQLGVQSSSRRYKQDIADMGVASDALLKLRPVTFHYKQVDEAGERPLQYGLIAEEVAEVMPALVVRDEHGQPETVAYQTLSSLLLNEYQKQHR 864
            N G + D+ VIR+G QG+Q K +IAGI G T SG   V  +ASGQLG  +SS+R+K  I D+G A D L+KLRPVTF YK+  E G  PLQYGLIAEEVA+V P LV  D+ G+P TV Y  L+ LLL+E QK+HR
Sbjct:  197 NFGYSDDSNVIRIGSQGSQTKAYIAGISGVTASGGVQVFVNASGQLGTLTSSKRFKSGIKDIGSAGDKLMKLRPVTFRYKEAAENGTHPLQYGLIAEEVAKVYPELVQYDKDGKPFTVYYHLLTPLLLSELQKEHR 332          
BLAST of mRNA_P-wetherbeei_contig18050.1.1 vs. uniprot
Match: UPI0019BB8663 (Tail fiber domain-containing protein n=1 Tax=Gloeobacterales cyanobacterium ES-bin-313 TaxID=2812629 RepID=UPI0019BB8663)

HSP 1 Score: 140 bits (352), Expect = 5.930e-34
Identity = 79/134 (58.96%), Postives = 96/134 (71.64%), Query Frame = 1
Query:  460 NVGAAGDTAVIRLGRQGTQKKTFIAGIRGTTVSGAA-VVASASGQLGVQSSSRRYKQDIADMGVASDALLKLRPVTFHYKQVDEAGERPLQYGLIAEEVAEVMPALVVRDEHGQPETVAYQTLSSLLLNEYQKQ 858
            N G AG++ VIR+G  G Q +T IAGI G T SG   V  +A+GQLG  +SSRR+K+DI ++G  SD LLKLRPV+F YKQ  E GE PLQYGLIAEEVA+V PALV  D+ G+P TV Y  L+ LLL E Q+Q
Sbjct:  340 NSGVAGESGVIRIGTPGAQTRTLIAGINGATASGGVQVFINANGQLGTLTSSRRFKRDINNLGSLSDRLLKLRPVSFRYKQATEQGEHPLQYGLIAEEVAKVFPALVQYDKEGKPFTVYYHLLTPLLLGEVQRQ 473          
BLAST of mRNA_P-wetherbeei_contig18050.1.1 vs. uniprot
Match: A0A4P5SVQ2_9BACT (Peptidase S74 domain-containing protein n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A4P5SVQ2_9BACT)

HSP 1 Score: 139 bits (350), Expect = 8.220e-34
Identity = 78/134 (58.21%), Postives = 94/134 (70.15%), Query Frame = 1
Query:  460 NVGAAGDTAVIRLGRQGTQKKTFIAGIRGTTVS-GAAVVASASGQLGVQSSSRRYKQDIADMGVASDALLKLRPVTFHYKQVDEAGERPLQYGLIAEEVAEVMPALVVRDEHGQPETVAYQTLSSLLLNEYQKQ 858
            N+G A D+ VIR+G  GT    FIAGI G+T S G AV   ++GQLG  +SSRR+K DI  MG  SD LL+LRPVTF YKQ DE G  P+QYGLIAEEVA+V P LV  D+ G+P TV Y  L+ +LLNE QK+
Sbjct:  322 NLGVAADSGVIRIGTVGTHTSAFIAGINGSTASSGVAVYVDSNGQLGTITSSRRFKNDIKTMGTVSDKLLQLRPVTFRYKQADEKGAHPVQYGLIAEEVAKVAPDLVQYDKAGKPFTVRYHLLTPMLLNELQKE 455          
BLAST of mRNA_P-wetherbeei_contig18050.1.1 vs. uniprot
Match: A0A2V7Z621_9BACT (Peptidase S74 domain-containing protein (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7Z621_9BACT)

HSP 1 Score: 129 bits (325), Expect = 3.320e-33
Identity = 79/140 (56.43%), Postives = 98/140 (70.00%), Query Frame = 1
Query:  460 NVGAAGDTAVIRLGRQGTQKKTFIAGIRGTTVSGAAVVASASGQLGVQSSSRRYKQDIADMGVASDALLKLRPVTFHYK-QVDEAGERPLQYGLIAEEVAEVMPALVVRDEHGQPETVAYQTLSSLLLNEYQKQHRDMRA 876
            N+GAAG+++  R+G    Q  TFIAGI G  V+G  V+ S+SGQLGV SSSR  K+DI ++  ASD L++LRPV + YK QVD  G    QYGLIAEEVA+V P LVV D  G+PETV Y  +++LLLNE QKQHR   A
Sbjct:   12 NLGAAGESSTTRIGD--VQTATFIAGINGAGVTGVPVLVSSSGQLGVASSSRSVKEDIREIAGASDGLMRLRPVAYKYKPQVDPTGLT--QYGLIAEEVADVYPDLVVYDRDGRPETVRYHLVNALLLNEVQKQHRTAEA 147          
BLAST of mRNA_P-wetherbeei_contig18050.1.1 vs. uniprot
Match: A0A2V5WZ58_9BACT (Peptidase S74 domain-containing protein n=5 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V5WZ58_9BACT)

HSP 1 Score: 135 bits (339), Expect = 6.740e-33
Identity = 72/142 (50.70%), Postives = 103/142 (72.54%), Query Frame = 1
Query:  460 NVGAAGDTAVIRLGRQGTQKKTFIAGIRGTTVSGAAVVASASGQLGVQSSSRRYKQDIADMGVASDALLKLRPVTFHYKQVDEAGERPLQYGLIAEEVAEVMPALVVRDEHGQPETVAYQTLSSLLLNEYQKQHRDMRALAA 885
            N G AG++  IR+G QGTQ +TF+AGIRGT V G+ VV ++SGQLGV  SS R+K +I  M  AS+A+L+L+PVTFHYK+  +    P Q+GL+AE+VA+V P LVV D  G+  TV Y  ++++LLNE+ K+H++++   A
Sbjct:  230 NSGVAGESNTIRIGTQGTQTRTFVAGIRGTAVGGSTVVVNSSGQLGVAGSSARFKDEIKPMDKASEAILELKPVTFHYKKEIDPDNTP-QFGLVAEDVAKVSPDLVVHDGKGEIYTVRYDAVNAMLLNEFLKEHKEVQEQGA 370          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18050.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2W2ARM2_9HYPH1.240e-3963.43Peptidase S74 domain-containing protein n=1 Tax=Ae... [more]
A0A537J219_9BACT2.910e-3556.64Peptidase S74 domain-containing protein (Fragment)... [more]
A0A2V5VGF5_9BACT2.970e-3552.35Peptidase S74 domain-containing protein n=1 Tax=Ve... [more]
A0A2V6LJ31_9BACT2.150e-3457.55Peptidase S74 domain-containing protein n=2 Tax=Ve... [more]
UPI0019CA7D3F3.760e-3458.96Tail fiber domain-containing protein n=1 Tax=Gloeo... [more]
UPI00198C72A15.160e-3457.35Tail fiber domain-containing protein n=1 Tax=Gloeo... [more]
UPI0019BB86635.930e-3458.96Tail fiber domain-containing protein n=1 Tax=Gloeo... [more]
A0A4P5SVQ2_9BACT8.220e-3458.21Peptidase S74 domain-containing protein n=1 Tax=Ar... [more]
A0A2V7Z621_9BACT3.320e-3356.43Peptidase S74 domain-containing protein (Fragment)... [more]
A0A2V5WZ58_9BACT6.740e-3350.70Peptidase S74 domain-containing protein n=5 Tax=Ve... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18050contigP-wetherbeei_contig18050:18..953 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1183438.GKIL_0413
PFAMsCBM_3,CHAT,CHU_C,Cohesin,Peptidase_S74
Model size936
Max annot lvl2|Bacteria
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005576
Exons1
Evalue2.16e-31
EggNOG OGsCOG2911@1|root,COG5295@1|root,COG2911@2|Bacteria,COG5295@2|Bacteria
DescriptionHep Hag repeat protein
Cds size936
COG categoryUW
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186134.8817604-CDS-P-wetherbeei_contig18050:17..9531683186134.8817604-CDS-P-wetherbeei_contig18050:17..953Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18050 18..953 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18050.1.1prot_P-wetherbeei_contig18050.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18050 18..953 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18050.1.1

>prot_P-wetherbeei_contig18050.1.1 ID=prot_P-wetherbeei_contig18050.1.1|Name=mRNA_P-wetherbeei_contig18050.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=312bp
GDEVLTFSIGSFNSGFGDQALRANTSGEDNVAVGVQALFSNTTGSVNNAF
GDLALKANTSGAKNVALGHQALAANTVAAENVAVGVVSLLKNTVGFRNTA
VGHAAMSSNLSGDYNLALGYLAGAFISTGNNNIAIGTKAGTTITTGSNNI
EIGNVGAAGDTAVIRLGRQGTQKKTFIAGIRGTTVSGAAVVASASGQLGV
QSSSRRYKQDIADMGVASDALLKLRPVTFHYKQVDEAGERPLQYGLIAEE
VAEVMPALVVRDEHGQPETVAYQTLSSLLLNEYQKQHRDMRALAAAARDQ
QQAAQERLVSLE
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mRNA from alignment at P-wetherbeei_contig18050:18..953+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18050.1.1 ID=mRNA_P-wetherbeei_contig18050.1.1|Name=mRNA_P-wetherbeei_contig18050.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=936bp|location=Sequence derived from alignment at P-wetherbeei_contig18050:18..953+ (Phaeothamnion wetherbeei SAG_119_79)
GGCGATGAGGTCCTGACCTTCTCTATAGGAAGCTTCAACAGCGGCTTCGG CGATCAGGCCTTGCGGGCTAACACTTCCGGTGAAGACAACGTCGCGGTCG GCGTGCAAGCTCTGTTCAGCAACACCACTGGCAGCGTCAACAACGCCTTT GGCGATCTGGCCTTGAAGGCCAATACCTCGGGCGCGAAGAATGTGGCGCT CGGCCATCAGGCGCTCGCGGCCAATACCGTCGCTGCGGAAAATGTCGCGG TGGGCGTGGTCAGTCTGCTGAAGAATACGGTGGGCTTCCGCAATACTGCA GTCGGCCATGCGGCCATGAGCAGCAATCTGTCGGGTGACTACAACCTGGC TCTCGGTTATCTGGCGGGCGCCTTTATTTCCACCGGCAATAACAATATCG CCATTGGCACCAAAGCCGGCACCACGATCACTACCGGCAGCAACAATATC GAGATCGGCAATGTCGGCGCGGCCGGCGACACCGCAGTCATTCGCCTCGG TCGTCAGGGCACGCAGAAGAAGACTTTCATTGCCGGCATACGCGGCACCA CGGTCAGCGGAGCGGCGGTGGTTGCCAGCGCGAGTGGCCAGCTTGGTGTG CAGAGTTCTTCGCGTCGTTACAAGCAGGATATCGCCGACATGGGCGTGGC CAGCGACGCCCTATTGAAACTCCGGCCGGTGACTTTCCACTATAAGCAGG TCGATGAAGCCGGCGAGCGTCCGCTGCAGTATGGCCTCATCGCCGAGGAA GTGGCCGAAGTGATGCCGGCCCTGGTGGTGCGCGACGAGCATGGCCAGCC CGAGACCGTTGCCTATCAGACCCTGTCCAGTTTGCTGTTGAACGAATATC AGAAGCAGCATCGCGATATGCGCGCGCTGGCCGCTGCCGCGCGCGACCAG CAGCAAGCCGCCCAGGAACGCCTGGTGAGCCTCGAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18050:18..953+

>mRNA_P-wetherbeei_contig18050.1.1 ID=mRNA_P-wetherbeei_contig18050.1.1|Name=mRNA_P-wetherbeei_contig18050.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=936bp|location=Sequence derived from alignment at P-wetherbeei_contig18050:18..953+ (Phaeothamnion wetherbeei SAG_119_79)
GGCGATGAGGTCCTGACCTTCTCTATAGGAAGCTTCAACAGCGGCTTCGG
CGATCAGGCCTTGCGGGCTAACACTTCCGGTGAAGACAACGTCGCGGTCG
GCGTGCAAGCTCTGTTCAGCAACACCACTGGCAGCGTCAACAACGCCTTT
GGCGATCTGGCCTTGAAGGCCAATACCTCGGGCGCGAAGAATGTGGCGCT
CGGCCATCAGGCGCTCGCGGCCAATACCGTCGCTGCGGAAAATGTCGCGG
TGGGCGTGGTCAGTCTGCTGAAGAATACGGTGGGCTTCCGCAATACTGCA
GTCGGCCATGCGGCCATGAGCAGCAATCTGTCGGGTGACTACAACCTGGC
TCTCGGTTATCTGGCGGGCGCCTTTATTTCCACCGGCAATAACAATATCG
CCATTGGCACCAAAGCCGGCACCACGATCACTACCGGCAGCAACAATATC
GAGATCGGCAATGTCGGCGCGGCCGGCGACACCGCAGTCATTCGCCTCGG
TCGTCAGGGCACGCAGAAGAAGACTTTCATTGCCGGCATACGCGGCACCA
CGGTCAGCGGAGCGGCGGTGGTTGCCAGCGCGAGTGGCCAGCTTGGTGTG
CAGAGTTCTTCGCGTCGTTACAAGCAGGATATCGCCGACATGGGCGTGGC
CAGCGACGCCCTATTGAAACTCCGGCCGGTGACTTTCCACTATAAGCAGG
TCGATGAAGCCGGCGAGCGTCCGCTGCAGTATGGCCTCATCGCCGAGGAA
GTGGCCGAAGTGATGCCGGCCCTGGTGGTGCGCGACGAGCATGGCCAGCC
CGAGACCGTTGCCTATCAGACCCTGTCCAGTTTGCTGTTGAACGAATATC
AGAAGCAGCATCGCGATATGCGCGCGCTGGCCGCTGCCGCGCGCGACCAG
CAGCAAGCCGCCCAGGAACGCCTGGTGAGCCTCGAG
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