prot_P-wetherbeei_contig1805.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1805.3.1
Unique Nameprot_P-wetherbeei_contig1805.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length133
Homology
BLAST of mRNA_P-wetherbeei_contig1805.3.1 vs. uniprot
Match: D8LMH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMH6_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 2.990e-22
Identity = 39/73 (53.42%), Postives = 59/73 (80.82%), Query Frame = 0
Query:   56 VGFLSLEEEEERDLDDGAAALYVVVVGWLMLGIGCVYFLMGICCIQGVRDRKLAKYRTLVAHAEVQEALREAH 128
            VG L LEEE+E+ LD G   LY+ ++ W+M+GIG +YFL+G+CC++ +RD+K+A+++TLVAHAE+Q A+R  H
Sbjct:   95 VGVLVLEEEDEKGLDLGGFGLYITIIAWIMVGIGALYFLLGLCCVKRIRDKKMARHKTLVAHAEMQAAMRRDH 167          
BLAST of mRNA_P-wetherbeei_contig1805.3.1 vs. uniprot
Match: A0A6H5JBP3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBP3_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 7.580e-22
Identity = 40/73 (54.79%), Postives = 59/73 (80.82%), Query Frame = 0
Query:   56 VGFLSLEEEEERDLDDGAAALYVVVVGWLMLGIGCVYFLMGICCIQGVRDRKLAKYRTLVAHAEVQEALREAH 128
            VG L LEEE+E+ LD G   LY+ +V W+M+GIG +YFL+G+CC++ +RD+K+A+++TLVAHAE+Q A+R  H
Sbjct:  150 VGVLVLEEEDEKGLDLGGFGLYITIVAWIMVGIGALYFLLGLCCVKRIRDKKMARHKTLVAHAEMQAAMRRDH 222          
BLAST of mRNA_P-wetherbeei_contig1805.3.1 vs. uniprot
Match: W7TYB2_9STRA (Golgi apparatus membrane protein TVP15 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TYB2_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 7.820e-9
Identity = 28/70 (40.00%), Postives = 47/70 (67.14%), Query Frame = 0
Query:   56 VGFLSLEEEEERDLDDGAAALYVVVVGWLMLGIGCVYFLMGICCIQGVRDRKLAKYRTLVAHAEVQEALR 125
            VG LS+++E E +       +++   G  ++G+G +YF+MG+ C++GVRDR+ A Y  L + AE++EALR
Sbjct:  188 VGLLSIKQEVEHEARINIVNVFIYCAGLGLIGLGVLYFVMGVFCLKGVRDRRAADYTILKSQAELEEALR 257          
BLAST of mRNA_P-wetherbeei_contig1805.3.1 vs. uniprot
Match: A0A4D9D1W9_9STRA (Cryptochrome DASH n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1W9_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 1.960e-8
Identity = 28/70 (40.00%), Postives = 46/70 (65.71%), Query Frame = 0
Query:   56 VGFLSLEEEEERDLDDGAAALYVVVVGWLMLGIGCVYFLMGICCIQGVRDRKLAKYRTLVAHAEVQEALR 125
            VG LS+++E E +        ++   G  ++G+G +YF+MG+ C++GVRDR+ A Y  L + AE++EALR
Sbjct:  656 VGLLSIKQEVEHEARINIVNAFIYCAGLGLIGLGVLYFVMGVFCLKGVRDRRAADYTILKSQAELEEALR 725          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1805.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LMH6_ECTSI2.990e-2253.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JBP3_9PHAE7.580e-2254.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7TYB2_9STRA7.820e-940.00Golgi apparatus membrane protein TVP15 n=1 Tax=Nan... [more]
A0A4D9D1W9_9STRA1.960e-840.00Cryptochrome DASH n=1 Tax=Nannochloropsis salina C... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1805contigP-wetherbeei_contig1805:5451..5849 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1805.3.1mRNA_P-wetherbeei_contig1805.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1805 5409..6611 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1805.3.1 ID=prot_P-wetherbeei_contig1805.3.1|Name=mRNA_P-wetherbeei_contig1805.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=133bp
MSFALCVKWGRRGHKHEGRKRFRSSARIAWLPLTEILSPFPSGTHRCRLR
LLLNSVGFLSLEEEEERDLDDGAAALYVVVVGWLMLGIGCVYFLMGICCI
QGVRDRKLAKYRTLVAHAEVQEALREAHAGGA*
back to top