prot_P-wetherbeei_contig18047.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig18047.1.1
Unique Nameprot_P-wetherbeei_contig18047.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length162
Homology
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BLAST of mRNA_P-wetherbeei_contig18047.1.1 vs. uniprot
Match: A0A059LLB6_9CHLO (TLC domain-containing protein (Fragment) n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LLB6_9CHLO)

HSP 1 Score: 52.0 bits (123), Expect = 4.360e-5
Identity = 43/150 (28.67%), Postives = 69/150 (46.00%), Query Frame = 0 
Query:    1 VLLTYLFLDTGHMVRNWRAVGSNWPMVLHHSLFFVIVLIGVLVGQLPRFQHISFLMLSAEFSTPSLNLRWILSRGLGFRSWPLQAALSLSFALLFTMTRVAGYALLVADLYSASVWELDMAPAIRHTFAGCITVS---WLLNMYWFKLII 147
            V L Y  +D   M+R  R       MV HH +    +L+G+  G+      ++  ML  EF+TP +NLRW+L    G R   L  +  +   L +T+ R+  +A     LY       ++A   R T A C+ V    + +N+ W+  I+
Sbjct:   20 VSLGYFLVDLV-MLRVHRPYFGGVEMVAHHIMGIASLLVGLWWGEA---HGLTLGMLVTEFTTPFVNLRWMLEAA-GMRDSSLYVSNGMGLLLSWTLIRILYFAEFFPFLYRT---RHELALVHRPTAALCVAVPIVIFCMNLMWYHKIV 161
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18047.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A059LLB6_9CHLO4.360e-528.67TLC domain-containing protein (Fragment) n=1 Tax=H... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006634TRAM/LAG1/CLN8 homology domainPFAMPF03798TRAM_LAG1_CLN8coord: 4..147
e-value: 1.7E-14
score: 54.0
IPR006634TRAM/LAG1/CLN8 homology domainPROSITEPS50922TLCcoord: 1..155
score: 11.234522
NoneNo IPR availablePANTHERPTHR13439CT120 PROTEINcoord: 3..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18047contigP-wetherbeei_contig18047:291..776 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18047.1.1mRNA_P-wetherbeei_contig18047.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig18047 291..776 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig18047.1.1 ID=prot_P-wetherbeei_contig18047.1.1|Name=mRNA_P-wetherbeei_contig18047.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=162bp
VLLTYLFLDTGHMVRNWRAVGSNWPMVLHHSLFFVIVLIGVLVGQLPRFQ
HISFLMLSAEFSTPSLNLRWILSRGLGFRSWPLQAALSLSFALLFTMTRV
AGYALLVADLYSASVWELDMAPAIRHTFAGCITVSWLLNMYWFKLIIGSA
VGGSGGGGARGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006634TLC-dom