mRNA_P-wetherbeei_contig1804.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1804.1.3 vs. uniprot
Match: A0A4D9D1X7_9STRA (E3 ubiquitin-protein ligase n=6 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1X7_9STRA) HSP 1 Score: 147 bits (371), Expect = 1.800e-37 Identity = 80/190 (42.11%), Postives = 102/190 (53.68%), Query Frame = 1
Query: 4 VCGYVFKRGDIAWNCRDCQSDGTCVQCDACFRRADHTGHEVHFHRTAQASNNTIQSKFLGCCDCGDVEAWDARGCCPRHGPADVDVDPMAALPVALRASAAAVTEEAVELLRLVVITAPLDGPLRKGKRHLCSVIPQIPTNPWLAEVEAGSAGGEKGGEGSRQPAAPPTVLDVRLHNDDINSFDKVITTL 573
VCGY FKRGD+ WNCR CQ+D TCVQCD CFR +DH GHEV+FH+ + GCCDCGD+EAWD GCC H +D DP+ +LP ++R A V EAV L V A L H + P P +A+ +AG + GE +RLHNDD+++F+ V L
Sbjct: 130 VCGYTFKRGDLCWNCRSCQTDPTCVQCDPCFRASDHAGHEVYFHQASPG----------GCCDCGDLEAWDRAGCCTAHSGSDPCQDPVDSLPASMRLPARVVFAEAVAL----VTDACLQAVQGYNSSHTHGFLVPGPVPP-VADEDAGLRNHPRSGEDRGH-------CILRLHNDDVHTFNHVTDAL 297
BLAST of mRNA_P-wetherbeei_contig1804.1.3 vs. uniprot
Match: K8YNA8_NANGC (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YNA8_NANGC) HSP 1 Score: 135 bits (340), Expect = 9.890e-37 Identity = 60/111 (54.05%), Postives = 73/111 (65.77%), Query Frame = 1
Query: 4 VCGYVFKRGDIAWNCRDCQSDGTCVQCDACFRRADHTGHEVHFHRTAQASNNTIQSKFLGCCDCGDVEAWDARGCCPRHGPADVDVDPMAALPVALRASAAAVTEEAVELL 336
VCGY FKRGD+ WNCR CQ+D TCVQCD CFR +DH GHEV+FH+ + GCCDCGD+EAWD GCC H +D DP+ +LP ++R A V EAV L+
Sbjct: 72 VCGYTFKRGDLCWNCRSCQTDPTCVQCDPCFRASDHAGHEVYFHQASPG----------GCCDCGDLEAWDRAGCCTAHSGSDPFQDPVDSLPTSMRLPARVVLAEAVALV 172
BLAST of mRNA_P-wetherbeei_contig1804.1.3 vs. uniprot
Match: D7G3D3_ECTSI (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3D3_ECTSI) HSP 1 Score: 139 bits (351), Expect = 7.960e-35 Identity = 70/118 (59.32%), Postives = 74/118 (62.71%), Query Frame = 1
Query: 1 RVCGYVFKRGDIAWNCRDCQSDGTCVQCDACFRRADHTGHEVHFHRTAQASNNTIQSKFLGCCDCGDVEAWDARGCCPRHGPADVDV------DPMAALPVALRASAAAVTEEAVELL 336
RVCGYVFKRGDIAWNCR CQ D TCVQCDACFRR+DHTGH V+FHRTA GCCDCGD EAW GCC RH P D DP+AALP +A A V V L
Sbjct: 89 RVCGYVFKRGDIAWNCRKCQVDSTCVQCDACFRRSDHTGHPVYFHRTAPG----------GCCDCGDEEAWAEEGCCSRHRPRRGDQGGGGAGDPLAALPTDFQAVARIVVRGVVLFL 196
BLAST of mRNA_P-wetherbeei_contig1804.1.3 vs. uniprot
Match: A0A067CAK3_SAPPC (E3 ubiquitin-protein ligase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CAK3_SAPPC) HSP 1 Score: 139 bits (349), Expect = 1.580e-34 Identity = 70/192 (36.46%), Postives = 100/192 (52.08%), Query Frame = 1
Query: 1 RVCGYVFKRGDIAWNCRDCQSDGTCVQCDACFRRADHTGHEVHFHRTAQASNNTIQSKFLGCCDCGDVEAWDARGCCPRHGPADVDVDPMAALPVALRASAAAVTEEAVELLRLVVITAPLDGPLRKGKRHLCSVIPQIPTNPWLAEVEAGSAGGEKGGEGSRQPAAPPTVLDVRLHNDDINSFDKVITTLR 576
+VCGY+FK ++A++CRDCQ D TCV C ACF ++H GH+V F RT+ GCCDCGD EAW G C +H D + LP ++ AA + V+ + V++ A + R LC+++P W +A A K R+ A P T DVRLH+DD++ F V+ +R
Sbjct: 91 KVCGYIFKADEMAYSCRDCQHDSTCVMCQACFADSNHDGHDVSFQRTSAG----------GCCDCGDTEAWAKDGFCHKHPGRDASISKPLVLPKGMQEVAAPLINTVVQYVHDVLVMAEDSVEITTVMRELCAMVPPPDRISWKDSDDAREAANTKT-RAEREAAPPATEYDVRLHSDDVHPFQDVVKAIR 271
BLAST of mRNA_P-wetherbeei_contig1804.1.3 vs. uniprot
Match: A0A7S1TVV5_9STRA (E3 ubiquitin-protein ligase (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVV5_9STRA) HSP 1 Score: 138 bits (347), Expect = 2.760e-34 Identity = 81/204 (39.71%), Postives = 109/204 (53.43%), Query Frame = 1
Query: 1 RVCGYVFKRGDIAWNCRDCQSDGTCVQCDACFRRADHTGHEVHFHRTAQASNNTIQSKFLGCCDCGDVEAWDARGCCPRHGPADVDV--DPMAALPVALRASAAAVTEEA----VELLRLVVITAPLDGPLRKGKRHLCSVIPQIPTNPWLAEVEAGSAGGEKGGEGSRQPAAPPTVLD------VRLHNDDINSFDKVITTLR 576
R CGYVF+ GDI WNCR C++D TCVQCDACF+ +DH GHEV FH+ AS N GCCDCGD EAW GCCP H + + DP++AL A A+A AV E A V+ + V+ + P +G R + + + +N GG+ G R P + + V +HNDD +++D + T LR
Sbjct: 96 RYCGYVFQEGDICWNCRTCEADATCVQCDACFQASDHEGHEVFFHK---ASPN-------GCCDCGDEEAWALAGCCPLHRRNENETLRDPVSALDAAFAAAARAVLEAARDVLVDCVTDAVLCYEMSMPPPQGGRSRSNSVSSVGSN---------GEGGDAGEVDPRLATNPHMLAENDGRVHVFIHNDDWHTYDDITTLLR 280
BLAST of mRNA_P-wetherbeei_contig1804.1.3 vs. uniprot
Match: A0A7S4V6U6_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V6U6_9STRA) HSP 1 Score: 127 bits (318), Expect = 4.020e-34 Identity = 52/82 (63.41%), Postives = 57/82 (69.51%), Query Frame = 1
Query: 1 RVCGYVFKRGDIAWNCRDCQSDGTCVQCDACFRRADHTGHEVHFHRTAQASNNTIQSKFLGCCDCGDVEAWDARGCCPRHGP 246
R CGYVF+RGDIAWNCR CQ+D TCV CD CF +DH GHEV FHRT+ GCCDCGD+EAW GCCPRH P
Sbjct: 44 RPCGYVFRRGDIAWNCRTCQTDSTCVLCDRCFHESDHEGHEVFFHRTSPG----------GCCDCGDIEAWKIEGCCPRHRP 115
BLAST of mRNA_P-wetherbeei_contig1804.1.3 vs. uniprot
Match: A0A7S3ZP19_9STRA (E3 ubiquitin-protein ligase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZP19_9STRA) HSP 1 Score: 137 bits (346), Expect = 4.040e-34 Identity = 85/197 (43.15%), Postives = 104/197 (52.79%), Query Frame = 1
Query: 1 RVCGYVFKRGDIAWNCRDCQSDGTCVQCDACFRRADHTGHEVHFHRTAQASNNTIQSKFLGCCDCGDVEAWDARGCCPRHGPADV-DVDPMAALPVALRASAAAVTEEAVELLRLVVITAPLDGPLRKGKRHLCSVIPQIPTNPWLAEVEAGSAGGEKGGEGSRQPAAPPTV-----LDVRLHNDDINSFDKVITTL 573
R CG+VF GDIAWNCR CQ D TCV CDACFR ++H GHEV FHR A GCCDCGD EAW A GCC +H + V + DP+A+LP LR + V EA R VV A +R H +NP + E E+ G R AA + + VRLH+DD++S+D VI L
Sbjct: 109 RACGHVFAAGDIAWNCRTCQKDNTCVLCDACFRSSNHQGHEVFFHRAAPG----------GCCDCGDPEAWVAEGCCAKHRASSVVEEDPLASLPPGLRQAGEVVVREAA---RYVVGAA-----VRAAGAH-----EPFNSNPAFSTTEPN----EETGLLDRLSAAAQSRDEDQGVRVRLHDDDVHSYDDVIGAL 278
BLAST of mRNA_P-wetherbeei_contig1804.1.3 vs. uniprot
Match: A0A7S2LKQ2_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LKQ2_9STRA) HSP 1 Score: 127 bits (318), Expect = 6.080e-34 Identity = 58/101 (57.43%), Postives = 69/101 (68.32%), Query Frame = 1
Query: 1 RVCGYVFKRGDIAWNCRDCQSDGTCVQCDACFRRADHTGHEVHFHRTAQASNNTIQSKFLGCCDCGDVEAWDARGCCPRHGPADVDVDPMAALPVALRASA 303
R CGYVFKRGD+AWNCR CQ+D TCV CDACF+ +DHTGHEV FH+T+ GCCDCGDVEAW A+GCC H P V P+ P+ + A+A
Sbjct: 35 RPCGYVFKRGDMAWNCRTCQTDSTCVLCDACFQASDHTGHEVSFHQTSPG----------GCCDCGDVEAWAAKGCCDLHRP----VLPVLIPPICVEATA 121
BLAST of mRNA_P-wetherbeei_contig1804.1.3 vs. uniprot
Match: A0A836CB31_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB31_9STRA) HSP 1 Score: 136 bits (343), Expect = 1.030e-33 Identity = 86/230 (37.39%), Postives = 104/230 (45.22%), Query Frame = 1
Query: 1 RVCGYVFKRGDIAWNCRDCQSDGTCVQ-------------------------------------CDACFRRADHTGHEVHFHRTAQASNNTIQSKFLGCCDCGDVEAWDARGCCPRHGPADVDVDPMAALPVALRASAAAVTEEAVELLRLVV--ITAPLDGPLRKGKRHLCSVIPQIPTNPWLAEVEAGSAGGEKGGEGSRQPAAPPTVLDVRLHNDDINSFDKVITTL 573
R+CGYVFKRGDIAWNC CQ D T VQ CD+CFR++ H GH+V FHRT GCCDCGD EAW GCCP H A VDP+A+LP L A A ++ VV +G R N WL ++ +A E GEG+ A VL VRLHNDD+++FD VI+ L
Sbjct: 86 RICGYVFKRGDIAWNCLTCQCDPTAVQETTTREVAGALCICVALIHAIINPNHFPSFPAVQLQQCDSCFRQSSHVGHKVFFHRTNAG----------GCCDCGDEEAWATDGCCPTHSAAAATVDPLASLPPLLLTGARATVRAILDFATTVVWDCVHSFEGAER---------------NRWLKPSKSAAAAVEGEGEGA---AGGAPVLVVRLHNDDVHTFDHVISVL 287
BLAST of mRNA_P-wetherbeei_contig1804.1.3 vs. uniprot
Match: A0A7S4EF35_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EF35_9STRA) HSP 1 Score: 127 bits (318), Expect = 1.050e-33 Identity = 53/82 (64.63%), Postives = 56/82 (68.29%), Query Frame = 1
Query: 1 RVCGYVFKRGDIAWNCRDCQSDGTCVQCDACFRRADHTGHEVHFHRTAQASNNTIQSKFLGCCDCGDVEAWDARGCCPRHGP 246
R CGYVFKRGDIAWNCR CQ+D TCV CD CFR +DH GHEV+FHRT GCCDCGD EAW GCCP H P
Sbjct: 27 RPCGYVFKRGDIAWNCRTCQTDSTCVICDTCFRSSDHEGHEVYFHRTTPG----------GCCDCGDAEAWKPEGCCPAHRP 98 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1804.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1804.1.3 >prot_P-wetherbeei_contig1804.1.3 ID=prot_P-wetherbeei_contig1804.1.3|Name=mRNA_P-wetherbeei_contig1804.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=192bp RVCGYVFKRGDIAWNCRDCQSDGTCVQCDACFRRADHTGHEVHFHRTAQAback to top mRNA from alignment at P-wetherbeei_contig1804:883..1865- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1804.1.3 ID=mRNA_P-wetherbeei_contig1804.1.3|Name=mRNA_P-wetherbeei_contig1804.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=983bp|location=Sequence derived from alignment at P-wetherbeei_contig1804:883..1865- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1804:883..1865- >mRNA_P-wetherbeei_contig1804.1.3 ID=mRNA_P-wetherbeei_contig1804.1.3|Name=mRNA_P-wetherbeei_contig1804.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=576bp|location=Sequence derived from alignment at P-wetherbeei_contig1804:883..1865- (Phaeothamnion wetherbeei SAG_119_79)back to top |