mRNA_P-wetherbeei_contig18037.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18037.1.1 vs. uniprot
Match: A0A177P4S6_9GAMM (VWFA domain-containing protein n=3 Tax=Methylomonas TaxID=416 RepID=A0A177P4S6_9GAMM) HSP 1 Score: 130 bits (327), Expect = 5.880e-31 Identity = 86/247 (34.82%), Postives = 119/247 (48.18%), Query Frame = 1
Query: 1 WRTPDQAGQAAFEQQDYQGAAQAFQDPNWRAAARYRAGDFAGASEDLKNKDNALAHYNRGNALARQGQLQEALAAYDAALKLAPADADAHYNRELVAKALKDQEQAPPQGDQQSEXXXXXXXXXXXXXXXXXXXXGEKDGQSDEDMSGATNAGGGERSKXXXXXXXXXXXXXXXXXXXXXXXXAPSKEEVEPEDTAE---EAAKPGDKDQDVAGEAERKQATEQWLNQIRDDPAALLRRKFKYQYDQ 732
WRTPDQ G+ AF+ + Y AA F++P WRAAA++RAG + A+E LK+ +A HYNRGNALAR G L AL AY ALKL P ADA YN+EL+ K L Q+Q D + + + + D+ + A G E+ + S + +P ++ E E +P + E ++A Q L +I D+P LL+RKFKYQY Q
Sbjct: 353 WRTPDQQGRQAFDSEQYDAAASRFENPEWRAAAQFRAGQYREAAETLKSATSADGHYNRGNALARAGDLSAALEAYQQALKLQPDHADARYNKELIEKQLAQQQQPENSSDSKQDSTQAQPGAQNRQQPGSKQDDAGQSPRPDQQGQPSDPAAGNEKRQSDTQSAQADDQQRDDPSEKSREASPQSADSAKPPESTEPGRELTQPTAQPDQAGERDETERANAQLLKRIPDEPTGLLKRKFKYQYGQ 599
BLAST of mRNA_P-wetherbeei_contig18037.1.1 vs. uniprot
Match: UPI0004038AB7 (VWA domain-containing protein n=1 Tax=Methylocaldum szegediense TaxID=73780 RepID=UPI0004038AB7) HSP 1 Score: 129 bits (324), Expect = 1.590e-30 Identity = 111/268 (41.42%), Postives = 150/268 (55.97%), Query Frame = 1
Query: 1 WRTPDQAGQAAFEQQDYQGAAQAFQDPNWRAAARYRAGDFAGASEDLKNKDNALAHYNRGNALARQGQLQEALAAYDAALKLAPADADAHYNRELVAKALKDQEQAPPQGDQQSEXXXXXXXXXXXXXXXXXXXXGEKDGQSDEDMSGAT------NAGG---GERSKXXXXXXXXXXXXXXXXXXXXXXXXAPSKEEVEPEDTAEEAAKPGDKDQDVAGEA----ERKQATEQWLNQIRDDPAALLRRKFKYQYDQVYGGKDSETNP 765
W+TPDQ Q AF+ ++Y AA+ F++ W+AAA Y+AG + A++ L+ ++ + HYNRGNALARQG+ QEA+ AY AL+L P ADA YN+EL+ KAL+ Q+Q XXXXXXXXXXXXXXXXX G + D +G N G + S XXXX + V P D AE+ PG +++++A + E +QA EQWL +I DDP LL+RKF YQY Q + +E P
Sbjct: 353 WQTPDQQAQRAFKNENYDEAAKTFKNTEWKAAAHYKAGRYEDAAKILEGTNSVIGHYNRGNALARQGRYQEAIQAYQKALELDPEHADARYNKELIEKALEQQKQXXXXXXXXXXXXXXXXXXXXXXXXXXXGEDGXXHERESRDQAGGNDNSRQQNTGSESEADASDRSDTESXXXXEAHGRPETNDEKASGQDSDRVAP-DHAEDRQPPGSEEKEIAADTRTTDETRQAEEQWLRRIPDDPGGLLKRKFYYQYLQRQRTQGAEPRP 619
BLAST of mRNA_P-wetherbeei_contig18037.1.1 vs. uniprot
Match: A0A7C2NV89_9GAMM (VWA domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C2NV89_9GAMM) HSP 1 Score: 122 bits (306), Expect = 4.340e-28 Identity = 131/272 (48.16%), Postives = 165/272 (60.66%), Query Frame = 1
Query: 1 WRTPDQAGQAAFEQQDYQGAAQAFQDPNWRAAARYRAGDFAGASEDLKNKDNALAHYNRGNALARQGQLQEALAAYDAALKLAPADADAHYNRELVAKALKD-----QEQAPPQGDQ--QSEXXXXXXXXXXXXXXXXXXXXGEKDGQSDEDMSGATNAGGGERSKXXXXXXXXXXXXXXXXXXXXXXXXAPSKEEVEPEDTAEEAAKPGDKDQDVAGEAERKQATEQWLNQIRDDPAALLRRKFKYQY---------DQVYGGKDSETNPW 768
W PDQ G+ AFE + AA+ F++P WR+AA+YRAG F ++ L N D+AL HYNRGNALA+ GQ+ A+AAYD AL+L P DA +NR+L+ + L++ Q Q P +G+Q Q E XXXXXXXXXXXXXXXX G+S E + G E S+XXXXXXXXXXXXXXXXXXXXXXXX + P+D A++ QA EQWL ++ DP LLRRKF YQY ++V GG +E PW
Sbjct: 356 WARPDQRGREAFEAEQAARAAELFENPEWRSAAQYRAGQFEASAASLANVDSALGHYNRGNALAKAGQIPAAIAAYDRALELEPDHEDARFNRDLLEEFLENNPEAAQPQQPSEGEQSRQGESGGEXXXXXXXXXXXXXXXXXXXXGESGESQAAD---GAQEPSEXXXXXXXXXXXXXXXXXXXXXXXXXXXADAAGPDDVERWASE---------------QAAEQWLRRVPQDPGGLLRRKFLYQYQRLGVDQNGNRVLGGAAAEQPPW 609
BLAST of mRNA_P-wetherbeei_contig18037.1.1 vs. uniprot
Match: F9ZXX9_METMM (Tetratricopeptide TPR_1 repeat-containing protein n=1 Tax=Methylomonas methanica (strain MC09) TaxID=857087 RepID=F9ZXX9_METMM) HSP 1 Score: 120 bits (301), Expect = 2.030e-27 Identity = 62/102 (60.78%), Postives = 76/102 (74.51%), Query Frame = 1
Query: 1 WRTPDQAGQAAFEQQDYQGAAQAFQDPNWRAAARYRAGDFAGASEDLKNKDNALAHYNRGNALARQGQLQEALAAYDAALKLAPADADAHYNRELVAKALKD 306
W T DQ Q AF+QQ YQ AA+ F +P+WRAAA+Y+AG F A+E LK+ +A HYNRGNALA+ GQLQEA+ AY AALKL P ADA YN+EL+ K L+D
Sbjct: 350 WHTQDQRAQQAFQQQQYQQAAEQFSNPDWRAAAQYKAGQFQEAAETLKDTQSADGHYNRGNALAKAGQLQEAIQAYQAALKLDPNHADARYNKELLEKQLQD 451
BLAST of mRNA_P-wetherbeei_contig18037.1.1 vs. uniprot
Match: A0A2S5QTB9_9GAMM (VWFA domain-containing protein n=2 Tax=Methylococcaceae TaxID=403 RepID=A0A2S5QTB9_9GAMM) HSP 1 Score: 119 bits (299), Expect = 3.860e-27 Identity = 101/267 (37.83%), Postives = 136/267 (50.94%), Query Frame = 1
Query: 1 WRTPDQAGQAAFEQQDYQGAAQAFQDPNWRAAARYRAGDFAGASEDLK---NKDNALAHYNRGNALARQGQLQEALAAYDAALKLAPADADAHYNRELVAKALKDQEQAPPQGDQQSEXXXXXXXXXXXXXXXXXXXXGEKDGQSDEDMSGATN--------AGGGERSKXXXXXXXXXXXXXXXXXXXXXXXXAPSKEEVEPEDTAEEAAKPGDKDQDVAGEAERKQATEQWLNQIRDDPAALLRRKFKYQYDQVYGGKDSETNPW 768
W+TPDQ Q ++QQ + +A+ F DP W+A+A Y+AG++ A + + +++ YN+ NALAR GQL+EAL AY AL + P +ADA YNR++VAKAL+ Q+Q + XXXXXXXX + DGQ +D S A G + + XXXX K V+PED A+ A E++QA EQWL +I DDPA LLRRKFKYQY Q S+ W
Sbjct: 353 WQTPDQQAQIKYQQQQFAQSAEQFADPQWKASAYYKAGEYGKALKAYQAAPQPESSDYFYNQANALARSGQLEEALKAYGQALVIDPKNADAQYNRDIVAKALEKQQQ---EXXXXXXXXXXXXXXKQAADGNPTGDQKKPDGQDGDDSSQKPEPKPERPDPAASGLQQQEKQKPQEAKGQAEXXXXASGTAEGGHEKPPVKPEDKAQPALN--------VESTEQQQANEQWLKRIPDDPAGLLRRKFKYQYKQRNPNDGSDEESW 608
BLAST of mRNA_P-wetherbeei_contig18037.1.1 vs. uniprot
Match: A0A1J5S1I7_9ZZZZ (von Willebrand factor type A domain protein n=1 Tax=mine drainage metagenome TaxID=410659 RepID=A0A1J5S1I7_9ZZZZ) HSP 1 Score: 119 bits (297), Expect = 7.020e-27 Identity = 109/257 (42.41%), Postives = 129/257 (50.19%), Query Frame = 1
Query: 1 WRTPDQAGQAAFEQQDYQGAAQAFQDPNWRAAARYRAGDFAGASEDLKNKDNALAHYNRGNALARQGQLQEALAAYDAALKLAPADADAHYNRELVAKALKDQEQAP-PQGDQQSEXXXXXXXXXXXXXXXXXXXXGEKDGQSDEDMSGATNAGGGERSKXXXXXXXXXXXXXXXXXXXXXXXXAPSKEEVEPEDTAEEAAKPGDKDQDVAGEAERKQATEQWLNQIRDDPAALLRRKFKYQYDQVYGGKDSETNPW 768
W DQ G+ A ++ Q AA+ FQDP WRAAA YRAGD+ A LK D ALA YNRGNALAR GQL EA++AY+AALK P DA +NR+L+ K LK Q P P D + G + +D G AG + XXXXX XXXXXXXXXXX E P E A + Q++ +A QWL +I DDP L RRKF YQY Q G SE W
Sbjct: 357 WLRADQRGEQAMAAKEPQRAAKLFQDPQWRAAADYRAGDYQAAVASLKGIDTALADYNRGNALARLGQLPEAVSAYEAALKRQPGFDDARHNRDLLEKMLKPPPQRPSPASDGKQGKAPGTQSQSQSSSGGGKSARGSDQAKQAQDQRGKPGAG----QQGAAPQAAXXXXXDXXXXXXXXXXXXXXXXETTPGSAPESAQAAQENRQEMT------RADRQWLRRIPDDPGGLWRRKFLYQYRQQQQG--SEKQAW 601
BLAST of mRNA_P-wetherbeei_contig18037.1.1 vs. uniprot
Match: UPI001FADE508 (VWA domain-containing protein n=1 Tax=Methylobacter sp. S3L5C TaxID=2839024 RepID=UPI001FADE508) HSP 1 Score: 118 bits (295), Expect = 1.300e-26 Identity = 118/266 (44.36%), Postives = 148/266 (55.64%), Query Frame = 1
Query: 1 WRTPDQAGQAAFEQQDYQGAAQAFQDPNWRAAARYRAGDFAGASEDLKNKDNALAHYNRGNALARQGQLQEALAAYDAALKLAPADADAHYNRELVAKALKDQEQAPPQGDQQSEXXXXXXXXXXXXXXXXXXXXGEKDGQSDED----------------------MSGATNAGGGERSKXXXXXXXXXXXXXXXXXXXXXXXXAPSKEEVEPEDTAEEAAKPGDKDQDVAGEAERKQATEQWLNQIRDDPAALLRRKFKYQYDQ 732
W+ DQ Q ++ ++ AA F+DP+W+AAA Y+AGD+ A + LK +AL+ YN+GNALA+ GQL+EA+ AY+ ALK P DADA YN+ELV KAL+ Q+Q P D++ + XXXXX E GQ D A + XXXXXXXXXXXXXXXXXXXXXXXX EP +AKP D++Q QA EQWL +I DDPA LL+RKFKYQY Q
Sbjct: 352 WQNKDQQAQQVYKNNQFEEAANLFEDPDWKAAAHYKAGDYDKALDSLKVNQSALSAYNQGNALAQSGQLEEAVKAYEKALKRNPDDADAKYNKELVEKALEKQKQEQPPQDKKDKPDXXXXXSK------------ENSGQKKADDXXXXXXXXXXXXXXXXXXXXXXXXQQQADEQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPPKQVPASAKPSDEEQ---------QANEQWLKRIPDDPAGLLKRKFKYQYGQ 596
BLAST of mRNA_P-wetherbeei_contig18037.1.1 vs. uniprot
Match: UPI0004DFAE64 (VWA domain-containing protein n=1 Tax=Methylomarinum vadi TaxID=438855 RepID=UPI0004DFAE64) HSP 1 Score: 116 bits (290), Expect = 6.120e-26 Identity = 126/257 (49.03%), Postives = 155/257 (60.31%), Query Frame = 1
Query: 1 WRTPDQAGQAAFEQQDYQGAAQAFQDPNWRAAARYRAGDFAGASEDLKNKDNALAHYNRGNALARQGQLQEALAAYDAALKLAPADADAHYNRELVAKALKDQEQA-PPQGDQQSEXXXXXXXXXXXXXXXXXXXXGEKDGQSDEDMSGATNAGGGERSKXXXXXXXXXXXXXXXXXXXXXXXXAPSKEEVEPEDTAEEAAKPGDKDQDVAGEAERKQATEQWLNQIRDDPAALLRRKFKYQYDQVYGGKDSETNPW 768
W+T +Q Q AF QQ ++ AA+ FQ P W+AAA+Y+AG + A++ L+ D A HYNRGNALA+ GQLQ+AL AY ALKL P + DA YN+ELV +AL+ Q+Q PQ + S XXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXX A +E E P D E +QA+EQWL +I DDP+ LL+RKF+YQY Q + S+ W
Sbjct: 352 WQTQNQQAQQAFHQQKFEQAAEQFQSPQWKAAAQYKAGQYQQAAKTLQTVDTAEGHYNRGNALAKAGQLQQALEAYRQALKLDPDNEDAKYNKELVEQALQQQQQQNQPQSGEDSRQSDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXQAEQPDEAEAXXXQPAPQTPMD---------ESEQASEQWLKRIPDDPSGLLKRKFRYQYGQRGRKQSSQDQSW 596
BLAST of mRNA_P-wetherbeei_contig18037.1.1 vs. uniprot
Match: UPI00040408D7 (VWA domain-containing protein n=1 Tax=Pseudomonas azotifigens TaxID=291995 RepID=UPI00040408D7) HSP 1 Score: 115 bits (289), Expect = 7.950e-26 Identity = 123/256 (48.05%), Postives = 143/256 (55.86%), Query Frame = 1
Query: 1 WRTPDQAGQAAFEQQDYQGAAQAFQDPNWRAAARYRAGDFAGASEDLKNKDNALAHYNRGNALARQGQLQEALAAYDAALKLAPADADAHYNRELVAKALKDQEQAPPQGDQQSEXXXXXXXXXXXXXXXXXXXXGEKDGQSDEDMSGATNAGGGERSKXXXXXXXXXXXXXXXXXXXXXXXXAPSKEEVEPEDTAEEAAKPGDKDQDVAGE-AERKQATEQWLNQIRDDPAALLRRKFKYQYDQVYGGKDSETNP 765
W PDQ GQ QQ + AAQ F DP WR ARY AGD+ GA+ED A+ HYNRGNALAR G L EAL AYD AL L P A +NR LV + + Q + P + DQQ+ XXXXXXXXXXXXXXX AGG XXXXXXXXXXXXXXX A +++++ A +A + D D D A AE +QATEQWL +I DDP LLRRKF Y+ K ET P
Sbjct: 352 WLRPDQQGQRLLRQQRPEEAAQRFADPLWRGLARYLAGDYQGAAEDFARGQGAIDHYNRGNALARSGALDEALEAYDLALDLDPGLDQARHNRALVEQLRQQQARQPSEPDQQTGETPPXXXXXXXXXXXXXXX-----------------AGGAPXXXAPAGETXXXXXXXXXXXXXXXDSPAQNEDDLA---IAPQAGEDDDPDADGAPRSAEDRQATEQWLRRIPDDPGELLRRKFLYEQR-----KRQETRP 582
BLAST of mRNA_P-wetherbeei_contig18037.1.1 vs. uniprot
Match: UPI0019677F16 (VWA domain-containing protein n=1 Tax=Methylococcus sp. EFPC2 TaxID=2812648 RepID=UPI0019677F16) HSP 1 Score: 115 bits (289), Expect = 8.360e-26 Identity = 114/271 (42.07%), Postives = 136/271 (50.18%), Query Frame = 1
Query: 1 WRTPDQAGQAAFEQQDYQGAAQAFQDPNWRAAARYRAGDFAGASEDLKNKDNALAHYNRGNALARQGQLQEALAAYDAALKLAPADADAHYNRELVAKALKDQEQAPPQGDQQSEXXXXXXXXXXXXXXXXXXXXGEKDGQSDE------DMSGATNAGGGERSKXXXXXXXXXXXXXXXXXXXXXXXXAPSKEEVEPEDTAEEAAKPGDKDQDVAGEAERKQATE------------------QWLNQIRDDPAALLRRKFKYQYDQVYG 741
W+TPDQ A+ + + AA F DP W+ AA YRAGD+A A+ L++ D A AHYNRGNALA+QG EALAAYD AL L+P ADA YN+ELV AL+ Q++ Q+ E DGQ D+ D GGER+ XXXXXXXXXXXXXXXXXXXX E E A G+K + A E + QWL +I DDP LLRRKF YQY Q G
Sbjct: 353 WQTPDQRASRAYAEGRHAEAASTFSDPAWKGAALYRAGDYAEAARALESLDTAEAHYNRGNALAKQGLYLEALAAYDRALALSPQHADAKYNKELVEHALQQQQE------QKKEKPG--------------------DGQQDQAAKQRQDAKPENGQNGGERAXXXXXXXXXXXXXXXXXXXXXNSTQKDDMSE------GENAKGRGEKPRSAASETSAAEXXXXXXXXXXXXXXXXXXXXXQWLRRIPDDPGGLLRRKFYYQYQQRQG 591 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18037.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18037.1.1 >prot_P-wetherbeei_contig18037.1.1 ID=prot_P-wetherbeei_contig18037.1.1|Name=mRNA_P-wetherbeei_contig18037.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=257bp WRTPDQAGQAAFEQQDYQGAAQAFQDPNWRAAARYRAGDFAGASEDLKNKback to top mRNA from alignment at P-wetherbeei_contig18037:613..1383- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18037.1.1 ID=mRNA_P-wetherbeei_contig18037.1.1|Name=mRNA_P-wetherbeei_contig18037.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=771bp|location=Sequence derived from alignment at P-wetherbeei_contig18037:613..1383- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18037:613..1383- >mRNA_P-wetherbeei_contig18037.1.1 ID=mRNA_P-wetherbeei_contig18037.1.1|Name=mRNA_P-wetherbeei_contig18037.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=771bp|location=Sequence derived from alignment at P-wetherbeei_contig18037:613..1383- (Phaeothamnion wetherbeei SAG_119_79)back to top |