mRNA_P-wetherbeei_contig17953.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17953.1.1 vs. uniprot
Match: A0A7S1EHG6_HEMAN (Hypothetical protein n=3 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EHG6_HEMAN) HSP 1 Score: 77.4 bits (189), Expect = 3.420e-13 Identity = 56/178 (31.46%), Postives = 89/178 (50.00%), Query Frame = 1
Query: 1 GFLDLVISTMGGEVVVLGTGIRHDPENAWPSAPRGPLNGFVHGAEAGVFIRGLASGVAGSRYAA-VVAARMPLRFEIVDRRATAATAAPLLPPWQNHYHVVVTARASSDLGGDDGAGGVLLRRMYDEPGEYVVDVAWRRPRR-TTLTVTLTTGHGLVFTDSVEIGYNVGFHAVLKWMV 528
GF+DL++STM G V+ LGT +++ P AW S +G N + G+F+ G R+ V A M L FEIVD+R A Y V V+ +GG+ VLL++ Y PG+Y+ ++ R+ +T+ V + G F D V + +N+ F+ +KW++
Sbjct: 481 GFMDLLVSTMNGNVIALGTDVQYHPMKAWTSREQGNNNVELRDGRQGIFV------TEGYRHHGDKVGATMMLEFEIVDKRPVKGFGAG-----SGTYSVKVS------IGGN----AVLLQKTYTRPGKYLEELPCPARRQYSTIYVQMVNELGQHFEDRVAMSFNMRFYRAMKWVL 637
BLAST of mRNA_P-wetherbeei_contig17953.1.1 vs. uniprot
Match: A0A150FXB0_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150FXB0_GONPE) HSP 1 Score: 71.2 bits (173), Expect = 3.070e-11 Identity = 52/195 (26.67%), Postives = 87/195 (44.62%), Query Frame = 1
Query: 1 GFLDLVISTMGGEVVVLGTGIRHDPENAWPSAPRGPLNGFVHGAEAGVFIRGLASGVAGSRYAAVVAARMPLRFEIVDRRATAATAAPLLPPWQNHYHVVVTARASSDLGGDDGAGGVL-LRRMYDEPGEYVVDVAWRRPRRTTLT-VTLTTGHGLVFTDSVEIGYNVGFHAVLKWMVRRLMG--TAVNGCAVQG 573
G L+L+ +TM G V TG + P W S GP G G++ A R V R+ ++FE++D+R A LLP + Y+V + + G V+ + + PG Y V++ R + + + + LT GL ++D + +++ FH +LKW + +G TAV +G
Sbjct: 155 GALELLATTMSGNVYAWETGAPYHPLKTWTSQTLGPNGGVARYGYVGIYAT-----PAARRPRDVAGQRLQVQFEVLDKRVAFADNGTLLPGGRGPYNVTIILKGVGVKEMRAGESPVVGVADSFPGPGRYTVELPCPRAQASAVVRLELTDASGLQYSDEFALSFHLSFHRLLKWAIALPLGLMTAVLAAVARG 344
BLAST of mRNA_P-wetherbeei_contig17953.1.1 vs. uniprot
Match: A0A7S0VW01_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VW01_9CRYP) HSP 1 Score: 71.6 bits (174), Expect = 3.270e-11 Identity = 52/177 (29.38%), Postives = 85/177 (48.02%), Query Frame = 1
Query: 1 GFLDLVISTMGGEVVVLGTGIRHDPENAWPSAPRGPLNGFVHGAEAGVFIRGLASGVAGSRYAAVVAARMPLRFEIVDRRATAATAAPLLPPWQNHYHVVVTARASSDLGGDDGAGGVLLRRMYDEPGEYVVDVAWRRPRR-TTLTVTLTTGHGLVFTDSVEIGYNVGFHAVLKWMV 528
G +DLV++TM G V+ LGT + + P AW + +G N + G+F+ A + V A M L FEIVD+R + Y V V+ +GG+ VLL++ Y PG Y+ ++ R+ +T+ V + G F D V + +N+ F+ +KW++
Sbjct: 402 GLMDLVVATMNGNVLCLGTDVEYHPMKAWTAREQGNNNVELRDGRQGIFVT-----EAFRHHGDKVGATMMLEFEIVDKRPVKGFGSG-----SGRYSVKVS------IGGN----AVLLQKTYTRPGRYLEELPCPARRQYSTVYVQMINELGQHFEDRVAMSFNMRFYRAMKWVL 558
BLAST of mRNA_P-wetherbeei_contig17953.1.1 vs. uniprot
Match: A0A835XF51_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XF51_9CHLO) HSP 1 Score: 70.5 bits (171), Expect = 7.780e-11 Identity = 54/190 (28.42%), Postives = 87/190 (45.79%), Query Frame = 1
Query: 1 GFLDLVISTMGGEVVVLGTGIRHDPENAWPSAPRGPLNGFVHGAEAGVFIRGLASGVAGSRYAAVVAA-RMPLRFEIVDRRATAATAAPLLPPWQNHYHVVVTARASSDLGGDDGAGG----VLLRRMYDEPGEYVVDVAWRRPRRTTLT-VTLTTGHGLVFTDSVEIGYNVGFHAVLKWMVRRLMGTAV 552
G L+L+ +TM G V T ++ P +W S GP G++ SR A VA R+ ++FE+VD+R A LL + Y+V V + +G + A G V + + PG Y VD+ R + + + + L G+GL + D + +++ FH +LKW V +G V
Sbjct: 299 GMLELIATTMNGNVYSFETAAKYHPLKSWTSQVLGPNGQVARFGYVGIYAS------PASRVARDVAGERLQIQFEVVDKRVAFANNGTLLAGGRGPYNVSVVLKG---VGVKEMASGDAPVVGVADSFPGPGVYTVDIPCPRSQSSAVVRLELVDGNGLAYADEFALSFHMHFHRLLKWAVALPLGLMV 479
BLAST of mRNA_P-wetherbeei_contig17953.1.1 vs. uniprot
Match: A8JHK4_CHLRE (Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8JHK4_CHLRE) HSP 1 Score: 70.5 bits (171), Expect = 8.340e-11 Identity = 55/186 (29.57%), Postives = 90/186 (48.39%), Query Frame = 1
Query: 1 GFLDLVISTMGGEVVVLGTGIRHDPENAWPSAPRGPLNGFVHGAEAGVFIRGLASGVAGSRYAAVVAARMPLRFEIVDRRATAATAAPLLPPWQNHYHVVVTARASSDLGGDDGAGG----VLLRRMYDEPGEYVVDVAWRRPRRTTLT-VTLTTGHGLVFTDSVEIGYNVGFHAVLKWMVRRLMG 543
G L+L+ +TM G V TG + P W S GP NG V A G G+A+ A + V R+ + FE++D+R A LLP + Y+V V + +G + A G V + + PG YVVD+ + + + + + + GL+++D + +++ FH +LKW V +G
Sbjct: 445 GLLELLATTMNGNVYAFETGAPYHPLKTWTSQVLGP-NGQV--ARYGYV--GIAASPATRQARDVAGERLQVAFEVLDKRVAFADNGTLLPGGRGPYNVTVVLKG---VGVREMASGDAPVVGVADSFPGPGRYVVDIPCPKSQASAVVRLEMVDSSGLLYSDEFALSFHMHFHRLLKWAVALPLG 622
BLAST of mRNA_P-wetherbeei_contig17953.1.1 vs. uniprot
Match: A0A2K3DT90_CHLRE (Uncharacterized protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DT90_CHLRE) HSP 1 Score: 70.5 bits (171), Expect = 9.140e-11 Identity = 55/186 (29.57%), Postives = 90/186 (48.39%), Query Frame = 1
Query: 1 GFLDLVISTMGGEVVVLGTGIRHDPENAWPSAPRGPLNGFVHGAEAGVFIRGLASGVAGSRYAAVVAARMPLRFEIVDRRATAATAAPLLPPWQNHYHVVVTARASSDLGGDDGAGG----VLLRRMYDEPGEYVVDVAWRRPRRTTLT-VTLTTGHGLVFTDSVEIGYNVGFHAVLKWMVRRLMG 543
G L+L+ +TM G V TG + P W S GP NG V A G G+A+ A + V R+ + FE++D+R A LLP + Y+V V + +G + A G V + + PG YVVD+ + + + + + + GL+++D + +++ FH +LKW V +G
Sbjct: 843 GLLELLATTMNGNVYAFETGAPYHPLKTWTSQVLGP-NGQV--ARYGYV--GIAASPATRQARDVAGERLQVAFEVLDKRVAFADNGTLLPGGRGPYNVTVVLKG---VGVREMASGDAPVVGVADSFPGPGRYVVDIPCPKSQASAVVRLEMVDSSGLLYSDEFALSFHMHFHRLLKWAVALPLG 1020
BLAST of mRNA_P-wetherbeei_contig17953.1.1 vs. uniprot
Match: A0A836B0M0_9CHLO (Uncharacterized protein n=2 Tax=Chlamydomonas TaxID=3052 RepID=A0A836B0M0_9CHLO) HSP 1 Score: 70.1 bits (170), Expect = 1.240e-10 Identity = 56/186 (30.11%), Postives = 88/186 (47.31%), Query Frame = 1
Query: 1 GFLDLVISTMGGEVVVLGTGIRHDPENAWPSAPRGPLNGFVHGAEAGVFIRGLASGVAGSRYAAVVAARMPLRFEIVDRRATAATAAPLLPPWQNHYHVVVTARASSDLGGDDGAGG----VLLRRMYDEPGEYVVDVAWRRPRRTTLT-VTLTTGHGLVFTDSVEIGYNVGFHAVLKWMVRRLMG 543
G L+LV +TM G V TG + P W S GP NG V A G G+A+ A R V R+ ++FE++D+R A LL + Y+V V + +G + A G V + + PG Y+VD+ R + + + + + GL + D + +++ FH +LKW V +G
Sbjct: 823 GLLELVATTMNGNVYAFETGAPYHPLATWTSQVLGP-NGQV--ARYGYV--GIAATPASRRARDVAGERLQIQFEVLDKRVAFADNGTLLAGGRGPYNVTVVLKG---VGVKEMASGDAPVVGVADSFPGPGRYMVDIPCPRSQASAVVRLEMVDSSGLAYADEFALSFHMHFHRLLKWAVALPLG 1000
BLAST of mRNA_P-wetherbeei_contig17953.1.1 vs. uniprot
Match: L1I970_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1I970_GUITC) HSP 1 Score: 67.8 bits (164), Expect = 7.880e-10 Identity = 49/177 (27.68%), Postives = 79/177 (44.63%), Query Frame = 1
Query: 1 GFLDLVISTMGGEVVVLGTGIRHDPENAWPSAPRGPLNGFVHGAEAGVFIRGLASGVAGSRYAAVVAARMPLRFEIVDRRATAATAAPLLPPWQNHYHVVVTARASSDLGGDDGAGGVLLRRMYDEPGEYVVDVAWRRPRR-TTLTVTLTTGHGLVFTDSVEIGYNVGFHAVLKWMV 528
G +DL+++TM G V+ LGT + + P AW S +G N + G+FI + M FEIVD+R A YHV ++ S+ L + Y PG Y+ ++ R+ T++ V +T +G F D V + +N+ F+ LKW++
Sbjct: 1028 GKMDLLVTTMNGNVICLGTDVDYHPMKAWTSKEQGNNNVELRDGRQGIFILDRFR-----HFHDHNGPSMTFGFEIVDKRPVKGLGAS-----GGEYHVRISLGGSTKL----------FEKTYTHPGRYLEEIPCPDRRQFTSVFVEMTNEYGQHFEDRVSMSFNMHFYRALKWLL 1184
BLAST of mRNA_P-wetherbeei_contig17953.1.1 vs. uniprot
Match: A0A8J4LZ57_9CHLO (Uncharacterized protein n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4LZ57_9CHLO) HSP 1 Score: 66.6 bits (161), Expect = 1.920e-9 Identity = 53/187 (28.34%), Postives = 83/187 (44.39%), Query Frame = 1
Query: 1 GFLDLVISTMGGEVVVLGTGIRHDPENAWPSAPRGPLNGFVHGAEAGVFIRGLASGVAGSRYAAVVAA-RMPLRFEIVDRRATAATAAPLLPPWQNHYHVVVTARASSDLGGDDGAGG----VLLRRMYDEPGEYVVDV-AWRRPRRTTLTVTLTTGHGLVFTDSVEIGYNVGFHAVLKWMVRRLMG 543
G L+L+ +TM G V TG + P W S GP AG+F SR A VA R+ ++FE+VD+R LLP + Y+V V + +G + A G V + + PG Y VD+ A + + + + GL + D + +++ FH +LKW + +G
Sbjct: 792 GMLELLSTTMNGNVYAFETGAPYHPLKTWTSQVMGPNGQVARFDFAGIFA------TPSSRRARDVAGERLQVQFEVVDKRVAFKADGTLLPGGRGPYNVTVVLKG---VGVREMAAGDAPVVGVADSFPGPGRYSVDIPAPKTQASAVVRLEMVDSSGLSYADEFPLSFHMHFHRLLKWAIALPLG 969
BLAST of mRNA_P-wetherbeei_contig17953.1.1 vs. uniprot
Match: A0A6A5C5X7_NAEFO (Uncharacterized protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5C5X7_NAEFO) HSP 1 Score: 65.1 bits (157), Expect = 6.270e-9 Identity = 56/179 (31.28%), Postives = 83/179 (46.37%), Query Frame = 1
Query: 1 GFLDLVISTMGGEVVVLGTGIRHDPENAWPSAPRGPLNGFVHGAEA-GVFIRGLASGVAGSRYAAVVAARMPLRFEIVDRRATAATAAPLLPPWQNHYHVVVTARASSDLGGDDGAGGVLLRRMYDEPGEYVVDVAW--RRPRRTTLTVTLTTGHGLVFTDSVEIGYNVGFHAVLKWMV 528
G LDL++STM G ++ L T + P A P + NGF + G++ + Y V+ + + L FEIVD R T + LP Y+V + GA VL Y + G Y V+V R +TV L G +FTD++ + +N+GF ++LKWMV
Sbjct: 617 GKLDLLVSTMNGNLICLSTEAPYHPLKATPYQMQYE-NGFKYRDNMYGIYFKN-------REYRDVIGSTVGLDFEIVDNRKT--NSKDRLPV---AYNVRILL----------GANKVLYEGKYQKAGYYRVEVNTPEERTHNAIITVELRNEFGQLFTDNISLSFNIGFFSLLKWMV 772 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17953.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17953.1.1 >prot_P-wetherbeei_contig17953.1.1 ID=prot_P-wetherbeei_contig17953.1.1|Name=mRNA_P-wetherbeei_contig17953.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=182bp MGGEVVVLGTGIRHDPENAWPSAPRGPLNGFVHGAEAGVFIRGLASGVAGback to top mRNA from alignment at P-wetherbeei_contig17953:692..1390- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17953.1.1 ID=mRNA_P-wetherbeei_contig17953.1.1|Name=mRNA_P-wetherbeei_contig17953.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=699bp|location=Sequence derived from alignment at P-wetherbeei_contig17953:692..1390- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17953:692..1390- >mRNA_P-wetherbeei_contig17953.1.1 ID=mRNA_P-wetherbeei_contig17953.1.1|Name=mRNA_P-wetherbeei_contig17953.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=546bp|location=Sequence derived from alignment at P-wetherbeei_contig17953:692..1390- (Phaeothamnion wetherbeei SAG_119_79)back to top |