mRNA_P-wetherbeei_contig17882.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17882.1.1
Unique NamemRNA_P-wetherbeei_contig17882.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17882.1.1 vs. uniprot
Match: A0A537ALP3_9PROT (Peptidase M19 (Fragment) n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537ALP3_9PROT)

HSP 1 Score: 436 bits (1120), Expect = 6.340e-153
Identity = 195/262 (74.43%), Postives = 227/262 (86.64%), Query Frame = 1
Query:    1 MDAAQLHRDAVVIDGLIVSDFSRAVFEDMRRGGITAANCTCCVWEDFRDTMANVARWKTWFTDNADLITQVYTTADIARAKREGRVGIILGWQNLSGIDDRLGYLQIFRELGVRVMQITYNTQNLAGCGCYEKKDGGLSDFGHEAVAEMNRLGILCDLSHVGPRTSEDVIRASKKPVAYTHCLPMGLKQHPRNKTDEQLKFIAEHGGFIGVTMFPPFLKRGKDATVDDYIEAIEYVINIAGEDCIGIGTDFTQGYGTPFFEW 786
            M  A LHRD  V DGLI+S+FSR +FEDMRRGG+TAANCTC +WE FRDTMANVARW+ WF+++ADLIT V+TTADIARAKREG+ GI LGWQNL+GI+D++ +L +F+ELGV +MQI YNTQNL G GCYE KDGGLSDFGHE +AEMNRLGILCDLSHVGP+TSEDVI+AS+KP AYTHC P  LK HPRNK+DEQL+FI E GGF+GVTMFPPFLKRG  ATVDDY+EA+E+VIN+ GE+ +G GTDFTQGYG  FFEW
Sbjct:    1 MKTADLHRDLTVFDGLIISNFSREIFEDMRRGGLTAANCTCSIWEGFRDTMANVARWQRWFSEHADLITPVHTTADIARAKREGKTGIALGWQNLTGIEDQIAHLALFKELGVGIMQIAYNTQNLVGTGCYESKDGGLSDFGHEVIAEMNRLGILCDLSHVGPQTSEDVIKASRKPCAYTHCAPAALKSHPRNKSDEQLRFIVEKGGFVGVTMFPPFLKRGTAATVDDYVEAMEHVINVCGEEQVGFGTDFTQGYGREFFEW 262          
BLAST of mRNA_P-wetherbeei_contig17882.1.1 vs. uniprot
Match: A0A7W0X3Q3_9PROT (Membrane dipeptidase n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7W0X3Q3_9PROT)

HSP 1 Score: 435 bits (1118), Expect = 8.790e-152
Identity = 192/260 (73.85%), Postives = 227/260 (87.31%), Query Frame = 1
Query:    7 AAQLHRDAVVIDGLIVSDFSRAVFEDMRRGGITAANCTCCVWEDFRDTMANVARWKTWFTDNADLITQVYTTADIARAKREGRVGIILGWQNLSGIDDRLGYLQIFRELGVRVMQITYNTQNLAGCGCYEKKDGGLSDFGHEAVAEMNRLGILCDLSHVGPRTSEDVIRASKKPVAYTHCLPMGLKQHPRNKTDEQLKFIAEHGGFIGVTMFPPFLKRGKDATVDDYIEAIEYVINIAGEDCIGIGTDFTQGYGTPFFEW 786
            +  LH + +V DGL++S+FSRAVFEDMR GG+TAANCTCC+WE FRDTM NVARWK WF +++DLITQV+TTADIARAKREG+ GI+LGWQNLSGI+D+LGYL++F+ELGV +MQ+ YNTQNL G GCYE +D GLSDFGHE +AEMNRLGILCDLSHVG +TS+DVI+AS+KP AYTHC P  LK HPRNK+DEQL+FI E GGF+GVTMFPPFLKRG  ATVDDY+EA+EYVIN+ GED +G GTDFTQGYG  FF+W
Sbjct:    2 STNLHDNLIVFDGLVISNFSRAVFEDMRLGGLTAANCTCCIWEGFRDTMNNVARWKRWFREHSDLITQVHTTADIARAKREGKTGIVLGWQNLSGIEDQLGYLELFKELGVGIMQVAYNTQNLVGTGCYESRDSGLSDFGHEVIAEMNRLGILCDLSHVGSKTSDDVIKASQKPCAYTHCAPAALKAHPRNKSDEQLRFIVERGGFVGVTMFPPFLKRGTAATVDDYVEAMEYVINLCGEDHVGFGTDFTQGYGREFFDW 261          
BLAST of mRNA_P-wetherbeei_contig17882.1.1 vs. uniprot
Match: A0A3S0M830_9HYPH (Membrane dipeptidase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A3S0M830_9HYPH)

HSP 1 Score: 435 bits (1118), Expect = 8.790e-152
Identity = 195/257 (75.88%), Postives = 228/257 (88.72%), Query Frame = 1
Query:   16 LHRDAVVIDGLIVSDFSRAVFEDMRRGGITAANCTCCVWEDFRDTMANVARWKTWFTDNADLITQVYTTADIARAKREGRVGIILGWQNLSGIDDRLGYLQIFRELGVRVMQITYNTQNLAGCGCYEKKDGGLSDFGHEAVAEMNRLGILCDLSHVGPRTSEDVIRASKKPVAYTHCLPMGLKQHPRNKTDEQLKFIAEHGGFIGVTMFPPFLKRGKDATVDDYIEAIEYVINIAGEDCIGIGTDFTQGYGTPFFEW 786
            LH+ A+VIDGLI+S+F+R VFEDMR+GGITAANCTCCVWE F +TM NVARWK WF ++ D+ITQVYTTADI RAK+EG+ GIILGWQNL+GI+D++GYL +F+ELGV +MQ+ YNTQNL GCGCYEK D GLS+FGH+ VAEMNRLGILCDLSHVGP+TS DVI ASK+PVAYTHCLP GLKQHPRNK+DEQLKFIA+ GGF+GVTMFPPFLK G  +TVDDY+EAI YV+NI GE+ +GIGTDFTQGYG  FF+W
Sbjct:    5 LHQRAIVIDGLIISNFNRDVFEDMRKGGITAANCTCCVWEGFTETMRNVARWKRWFGEHGDVITQVYTTADILRAKKEGKTGIILGWQNLTGIEDQIGYLALFKELGVGIMQMAYNTQNLIGCGCYEKVDSGLSEFGHDVVAEMNRLGILCDLSHVGPKTSSDVILASKQPVAYTHCLPAGLKQHPRNKSDEQLKFIADKGGFVGVTMFPPFLKNGPKSTVDDYVEAIGYVMNICGEEGVGIGTDFTQGYGQEFFDW 261          
BLAST of mRNA_P-wetherbeei_contig17882.1.1 vs. uniprot
Match: A0A1M5YWH6_9BRAD (Membrane dipeptidase n=1 Tax=Bradyrhizobium erythrophlei TaxID=1437360 RepID=A0A1M5YWH6_9BRAD)

HSP 1 Score: 434 bits (1117), Expect = 1.250e-151
Identity = 195/259 (75.29%), Postives = 225/259 (86.87%), Query Frame = 1
Query:   10 AQLHRDAVVIDGLIVSDFSRAVFEDMRRGGITAANCTCCVWEDFRDTMANVARWKTWFTDNADLITQVYTTADIARAKREGRVGIILGWQNLSGIDDRLGYLQIFRELGVRVMQITYNTQNLAGCGCYEKKDGGLSDFGHEAVAEMNRLGILCDLSHVGPRTSEDVIRASKKPVAYTHCLPMGLKQHPRNKTDEQLKFIAEHGGFIGVTMFPPFLKRGKDATVDDYIEAIEYVINIAGEDCIGIGTDFTQGYGTPFFEW 786
            +QLH ++VVIDGLI+S+F R VFEDMR+GG+TA NCTCCVWE F DTM NV RWK WF D++DL+ QVYTT DI  AK+EG+ GIILGWQN+SGI+D++GYL +F+ELGV V+Q+ YNTQNL G GCYE KDGGLSDFGH+ V+EMNRLGILCDLSHVGP+TS DVI ASK+PVAY+HCLP GLK HPRNKTDEQLKFI +HGGF+GVTMFPPFLKRG  A VDDY+EAIEYVINI GE  +GIGTDFTQGYG PFF+W
Sbjct:    3 SQLHEESVVIDGLIISNFGRPVFEDMRKGGLTAVNCTCCVWEGFTDTMRNVMRWKKWFNDHSDLLKQVYTTEDILAAKQEGKTGIILGWQNISGIEDQIGYLGLFKELGVGVIQMAYNTQNLVGSGCYETKDGGLSDFGHDVVSEMNRLGILCDLSHVGPQTSIDVILASKQPVAYSHCLPSGLKAHPRNKTDEQLKFIVDHGGFVGVTMFPPFLKRGASAKVDDYVEAIEYVINICGEKNVGIGTDFTQGYGQPFFDW 261          
BLAST of mRNA_P-wetherbeei_contig17882.1.1 vs. uniprot
Match: A0A4Q8R1Y6_9BRAD (Peptidase M19 n=4 Tax=Bradyrhizobium TaxID=374 RepID=A0A4Q8R1Y6_9BRAD)

HSP 1 Score: 428 bits (1100), Expect = 4.820e-149
Identity = 189/260 (72.69%), Postives = 225/260 (86.54%), Query Frame = 1
Query:    7 AAQLHRDAVVIDGLIVSDFSRAVFEDMRRGGITAANCTCCVWEDFRDTMANVARWKTWFTDNADLITQVYTTADIARAKREGRVGIILGWQNLSGIDDRLGYLQIFRELGVRVMQITYNTQNLAGCGCYEKKDGGLSDFGHEAVAEMNRLGILCDLSHVGPRTSEDVIRASKKPVAYTHCLPMGLKQHPRNKTDEQLKFIAEHGGFIGVTMFPPFLKRGKDATVDDYIEAIEYVINIAGEDCIGIGTDFTQGYGTPFFEW 786
            ++QLH  ++VIDGLI+S+F R +FEDMR+GG+TAANCTCC+WE F +TM NV  WK WF ++ DLI QVYTT DI  AK+EGR GIILGWQN++GI+D++GYL +F+ELGV ++Q+ YNTQNL G GCYE+KDGGLSDFGHE VAEMNRLGILCDLSHVGP+TS DVI ASKKPV Y+HCLP GLK HPRNK+DEQLKFIA+ GGF+GVTMFPPFLKRG +ATVDDY+EAIEYVI+I GE  +G+GTDFTQGY  PFF+W
Sbjct:    2 SSQLHERSIVIDGLIISNFGRDIFEDMRKGGLTAANCTCCIWEGFTETMRNVMHWKHWFREHGDLIKQVYTTQDIMAAKKEGRTGIILGWQNITGIEDQIGYLSLFKELGVGIIQMAYNTQNLVGTGCYERKDGGLSDFGHEVVAEMNRLGILCDLSHVGPQTSTDVILASKKPVTYSHCLPAGLKSHPRNKSDEQLKFIADRGGFVGVTMFPPFLKRGVEATVDDYVEAIEYVIDICGERNVGVGTDFTQGYAQPFFDW 261          
BLAST of mRNA_P-wetherbeei_contig17882.1.1 vs. uniprot
Match: A0A161QY49_9BRAD (Peptidase M19 n=7 Tax=Bradyrhizobiaceae TaxID=41294 RepID=A0A161QY49_9BRAD)

HSP 1 Score: 428 bits (1100), Expect = 4.820e-149
Identity = 188/260 (72.31%), Postives = 226/260 (86.92%), Query Frame = 1
Query:    7 AAQLHRDAVVIDGLIVSDFSRAVFEDMRRGGITAANCTCCVWEDFRDTMANVARWKTWFTDNADLITQVYTTADIARAKREGRVGIILGWQNLSGIDDRLGYLQIFRELGVRVMQITYNTQNLAGCGCYEKKDGGLSDFGHEAVAEMNRLGILCDLSHVGPRTSEDVIRASKKPVAYTHCLPMGLKQHPRNKTDEQLKFIAEHGGFIGVTMFPPFLKRGKDATVDDYIEAIEYVINIAGEDCIGIGTDFTQGYGTPFFEW 786
            ++ +H +A+V+DGLI+SDF R VFEDMR+GG+TAANCTCCVWE F  TM NV +WK WF DN D++ QVYTTADI +AK EG+ GIILGWQN++GI+D++GYL +F+ELGV ++Q+ YNTQNL G GCYE KDGGLSDFG E VAEMNRLGILCDLSHVG +TSEDVI ASK+PVAY+HCLP GLK+HPRNK+DEQL+FI +HGGF+GVTMFPPFLKRG  +TVDDY+EAIEYVI+I GE+ +GIGTDFTQGYG  FF+W
Sbjct:    2 SSTIHENAIVVDGLIISDFGRPVFEDMRKGGLTAANCTCCVWEGFEATMRNVVKWKRWFADNDDILKQVYTTADILKAKEEGKTGIILGWQNVTGIEDQIGYLGLFKELGVGIIQMAYNTQNLVGTGCYESKDGGLSDFGREVVAEMNRLGILCDLSHVGSKTSEDVILASKQPVAYSHCLPAGLKEHPRNKSDEQLRFIVDHGGFVGVTMFPPFLKRGPASTVDDYVEAIEYVIDICGENSVGIGTDFTQGYGQEFFDW 261          
BLAST of mRNA_P-wetherbeei_contig17882.1.1 vs. uniprot
Match: A0A4D7AUD9_9HYPH (Membrane dipeptidase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A4D7AUD9_9HYPH)

HSP 1 Score: 426 bits (1094), Expect = 3.950e-148
Identity = 190/260 (73.08%), Postives = 224/260 (86.15%), Query Frame = 1
Query:    7 AAQLHRDAVVIDGLIVSDFSRAVFEDMRRGGITAANCTCCVWEDFRDTMANVARWKTWFTDNADLITQVYTTADIARAKREGRVGIILGWQNLSGIDDRLGYLQIFRELGVRVMQITYNTQNLAGCGCYEKKDGGLSDFGHEAVAEMNRLGILCDLSHVGPRTSEDVIRASKKPVAYTHCLPMGLKQHPRNKTDEQLKFIAEHGGFIGVTMFPPFLKRGKDATVDDYIEAIEYVINIAGEDCIGIGTDFTQGYGTPFFEW 786
            ++ LH+ +VVIDGLI+SDF R VFEDMRRGG+TAANCTCCVWE F +TM NV RWK WF ++ D+I+Q+YTTADI +AK EG+ GIILGWQN++GI+D++GYL +F+ELG+ ++Q+ YNTQNL G GCYE KDGGLSDFG E VAEMNRLGILCDLSHVG +TS DVI ASK+PVAY+HCLP GLK HPRNKTDEQLKFI +HGGF+GVTMFPPFLKRG  A VDDY+EAIEYVI+I GE  +GIGTDFTQGYG  FF+W
Sbjct:    2 SSDLHQKSVVIDGLIISDFGRPVFEDMRRGGLTAANCTCCVWEGFTETMRNVMRWKAWFREHGDIISQIYTTADILKAKAEGKTGIILGWQNITGIEDQIGYLGLFKELGIGIIQMAYNTQNLVGTGCYESKDGGLSDFGREVVAEMNRLGILCDLSHVGAQTSTDVILASKQPVAYSHCLPAGLKAHPRNKTDEQLKFIVDHGGFVGVTMFPPFLKRGPAANVDDYVEAIEYVIDICGEANVGIGTDFTQGYGQEFFDW 261          
BLAST of mRNA_P-wetherbeei_contig17882.1.1 vs. uniprot
Match: A0A7C2QL98_9HYPH (Membrane dipeptidase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2QL98_9HYPH)

HSP 1 Score: 421 bits (1081), Expect = 3.630e-146
Identity = 191/257 (74.32%), Postives = 219/257 (85.21%), Query Frame = 1
Query:   16 LHRDAVVIDGLIVSDFSRAVFEDMRRGGITAANCTCCVWEDFRDTMANVARWKTWFTDNADLITQVYTTADIARAKREGRVGIILGWQNLSGIDDRLGYLQIFRELGVRVMQITYNTQNLAGCGCYEKKDGGLSDFGHEAVAEMNRLGILCDLSHVGPRTSEDVIRASKKPVAYTHCLPMGLKQHPRNKTDEQLKFIAEHGGFIGVTMFPPFLKRGKDATVDDYIEAIEYVINIAGEDCIGIGTDFTQGYGTPFFEW 786
            LH   +VIDGL VS+F R+VFEDMRRGG+TAANCT CVWE F  TM N ARWKTW  +++DLITQVYTT DI RAKREG+ GIILGWQN SGI+DRL +L +F ELG+R++Q+TYNTQNL GCGCYE +D GLSDFG + +AEMNRLGILCDLSHVGP+TSED I ASK+ VAY+HCLP GLK HPRNKTDEQL+FIA+ GGFIGVTMFP FL+RG  ATVDDY+EAIEYV+N+ GEDC+GIGTDFTQGYG  FF W
Sbjct:    4 LHDRLIVIDGLNVSNFGRSVFEDMRRGGVTAANCTSCVWEGFAGTMGNFARWKTWLRESSDLITQVYTTEDIRRAKREGKTGIILGWQNASGIEDRLDHLALFHELGLRIVQLTYNTQNLLGCGCYETRDAGLSDFGRDVLAEMNRLGILCDLSHVGPKTSEDAILASKQRVAYSHCLPAGLKAHPRNKTDEQLRFIADRGGFIGVTMFPAFLRRGTAATVDDYVEAIEYVMNLVGEDCVGIGTDFTQGYGEEFFRW 260          
BLAST of mRNA_P-wetherbeei_contig17882.1.1 vs. uniprot
Match: A7IDL9_XANP2 (Membrane dipeptidase n=3 Tax=Xanthobacter TaxID=279 RepID=A7IDL9_XANP2)

HSP 1 Score: 420 bits (1080), Expect = 5.150e-146
Identity = 188/259 (72.59%), Postives = 223/259 (86.10%), Query Frame = 1
Query:   10 AQLHRDAVVIDGLIVSDFSRAVFEDMRRGGITAANCTCCVWEDFRDTMANVARWKTWFTDNADLITQVYTTADIARAKREGRVGIILGWQNLSGIDDRLGYLQIFRELGVRVMQITYNTQNLAGCGCYEKKDGGLSDFGHEAVAEMNRLGILCDLSHVGPRTSEDVIRASKKPVAYTHCLPMGLKQHPRNKTDEQLKFIAEHGGFIGVTMFPPFLKRGKDATVDDYIEAIEYVINIAGEDCIGIGTDFTQGYGTPFFEW 786
            + LH   VVIDGLI+SDFSRAVFEDMR+GG+TAANCTCCVW++F +TM N+A+WK  F  NAD+I+QVYTT DI +AK EG+ GIILGWQN SGI+D + YLQ+F ELGVR++Q+TYNTQN  G GCYE  D GLSDFGH+ VAEMNRLGILCDLSHVGP+TSED I+ASK+ VAY+HCLP GLK HPRNK+D QL+FIA+ GGFIGVTMFPPFL +G +ATV DY+EA+EY+INIAGED +G+GTDFTQGYG PFF+W
Sbjct:    2 SSLHEQLVVIDGLIISDFSRAVFEDMRKGGLTAANCTCCVWDNFTETMRNIAKWKKDFAANADIISQVYTTQDILKAKAEGKTGIILGWQNTSGIEDHIEYLQLFHELGVRIIQMTYNTQNWVGSGCYEGTDSGLSDFGHDVVAEMNRLGILCDLSHVGPKTSEDTIKASKQRVAYSHCLPAGLKAHPRNKSDAQLRFIADKGGFIGVTMFPPFLAKGPEATVADYVEAMEYIINIAGEDVVGVGTDFTQGYGQPFFDW 260          
BLAST of mRNA_P-wetherbeei_contig17882.1.1 vs. uniprot
Match: A0A317MVF1_9GAMM (Membrane dipeptidase n=1 Tax=Plasticicumulans acidivorans TaxID=886464 RepID=A0A317MVF1_9GAMM)

HSP 1 Score: 420 bits (1080), Expect = 5.520e-146
Identity = 189/262 (72.14%), Postives = 229/262 (87.40%), Query Frame = 1
Query:    1 MDAAQLHRDAVVIDGLIVSDFSRAVFEDMRRGGITAANCTCCVWEDFRDTMANVARWKTWFTDNADLITQVYTTADIARAKREGRVGIILGWQNLSGIDDRLGYLQIFRELGVRVMQITYNTQNLAGCGCYEKKDGGLSDFGHEAVAEMNRLGILCDLSHVGPRTSEDVIRASKKPVAYTHCLPMGLKQHPRNKTDEQLKFIAEHGGFIGVTMFPPFLKRGKDATVDDYIEAIEYVINIAGEDCIGIGTDFTQGYGTPFFEW 786
            M   +LH+DA+VIDGLI++++SRA+FEDMR+GG+TAANCTC VWE+ R T+ N+ARWK +F DNADLIT V+TTADI RAK+EGR GIILGWQNLSGI+D++ +L++F++LGV VMQ+ YNTQNL G GCYE KDGGLSDFG E VAEMN +GILCDLSHVG +TSEDVI  SKKPVAYTHCLP GLK+HPRNK+D +L+FIAE GGFIGVTMF PFL +G ++TVDDY+EA++Y+INIAGED +G+GTDFTQGY  PFFEW
Sbjct:    1 MTPQELHQDAIVIDGLIIANWSRAIFEDMRKGGLTAANCTCSVWENARGTLDNIARWKQFFRDNADLITPVHTTADILRAKQEGRTGIILGWQNLSGIEDQIPFLKVFKDLGVGVMQMAYNTQNLVGTGCYESKDGGLSDFGREVVAEMNAVGILCDLSHVGSKTSEDVILESKKPVAYTHCLPSGLKEHPRNKSDAELRFIAERGGFIGVTMFTPFLAKGIESTVDDYVEAMDYIINIAGEDSVGVGTDFTQGYDQPFFEW 262          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17882.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A537ALP3_9PROT6.340e-15374.43Peptidase M19 (Fragment) n=1 Tax=Betaproteobacteri... [more]
A0A7W0X3Q3_9PROT8.790e-15273.85Membrane dipeptidase n=2 Tax=Betaproteobacteria ba... [more]
A0A3S0M830_9HYPH8.790e-15275.88Membrane dipeptidase n=1 Tax=Hyphomicrobiales bact... [more]
A0A1M5YWH6_9BRAD1.250e-15175.29Membrane dipeptidase n=1 Tax=Bradyrhizobium erythr... [more]
A0A4Q8R1Y6_9BRAD4.820e-14972.69Peptidase M19 n=4 Tax=Bradyrhizobium TaxID=374 Rep... [more]
A0A161QY49_9BRAD4.820e-14972.31Peptidase M19 n=7 Tax=Bradyrhizobiaceae TaxID=4129... [more]
A0A4D7AUD9_9HYPH3.950e-14873.08Membrane dipeptidase n=2 Tax=Alphaproteobacteria T... [more]
A0A7C2QL98_9HYPH3.630e-14674.32Membrane dipeptidase n=1 Tax=Hyphomicrobiales bact... [more]
A7IDL9_XANP25.150e-14672.59Membrane dipeptidase n=3 Tax=Xanthobacter TaxID=27... [more]
A0A317MVF1_9GAMM5.520e-14672.14Membrane dipeptidase n=1 Tax=Plasticicumulans acid... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17882contigP-wetherbeei_contig17882:1..786 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1038860.AXAP01000002_gene4865
PFAMsPeptidase_M19
Model size786
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K01273
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.92e-150
EggNOG OGsCOG2355@1|root,COG2355@2|Bacteria,1MWEW@1224|Proteobacteria,2TR5C@28211|Alphaproteobacteria,3K3P8@41294|Bradyrhizobiaceae
EC3.4.13.19
DescriptionMembrane dipeptidase (Peptidase family M19)
Cds size786
COG categoryE
BRITEko00000,ko00537,ko01000,ko01002,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186129.8771994-CDS-P-wetherbeei_contig17882:0..7861683186129.8771994-CDS-P-wetherbeei_contig17882:0..786Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17882 1..786 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17882.1.1prot_P-wetherbeei_contig17882.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17882 1..786 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17882.1.1

>prot_P-wetherbeei_contig17882.1.1 ID=prot_P-wetherbeei_contig17882.1.1|Name=mRNA_P-wetherbeei_contig17882.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=262bp
MDAAQLHRDAVVIDGLIVSDFSRAVFEDMRRGGITAANCTCCVWEDFRDT
MANVARWKTWFTDNADLITQVYTTADIARAKREGRVGIILGWQNLSGIDD
RLGYLQIFRELGVRVMQITYNTQNLAGCGCYEKKDGGLSDFGHEAVAEMN
RLGILCDLSHVGPRTSEDVIRASKKPVAYTHCLPMGLKQHPRNKTDEQLK
FIAEHGGFIGVTMFPPFLKRGKDATVDDYIEAIEYVINIAGEDCIGIGTD
FTQGYGTPFFEW
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mRNA from alignment at P-wetherbeei_contig17882:1..786-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17882.1.1 ID=mRNA_P-wetherbeei_contig17882.1.1|Name=mRNA_P-wetherbeei_contig17882.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=786bp|location=Sequence derived from alignment at P-wetherbeei_contig17882:1..786- (Phaeothamnion wetherbeei SAG_119_79)
ATGGATGCTGCCCAGTTGCACCGCGACGCCGTCGTCATCGACGGGCTTAT CGTTTCTGATTTCAGCCGCGCCGTATTCGAAGACATGCGGCGCGGCGGGA TCACGGCCGCCAACTGCACCTGCTGCGTGTGGGAGGATTTTCGCGACACC ATGGCCAACGTCGCGCGCTGGAAAACCTGGTTCACGGACAACGCCGATCT CATCACGCAGGTCTACACCACCGCCGACATTGCGCGCGCCAAGCGCGAGG GGCGCGTGGGCATCATCCTCGGCTGGCAAAATCTATCGGGCATCGACGAC CGGCTGGGCTACCTGCAGATCTTTCGCGAACTGGGCGTGCGCGTCATGCA GATCACCTACAACACGCAGAATCTCGCCGGTTGCGGCTGCTATGAGAAAA AAGACGGCGGCCTCAGCGATTTCGGGCACGAGGCCGTCGCGGAAATGAAC CGGCTCGGCATCCTGTGCGACCTCTCGCATGTCGGGCCGCGTACCAGCGA GGACGTGATCCGCGCCTCAAAAAAGCCGGTTGCCTATACGCACTGTTTGC CGATGGGGCTCAAGCAGCATCCGCGCAACAAAACGGACGAGCAATTGAAG TTCATCGCCGAACACGGCGGCTTTATCGGCGTCACGATGTTTCCGCCCTT CCTGAAGCGCGGCAAGGACGCGACGGTGGACGACTACATCGAGGCCATTG AATACGTTATCAACATCGCCGGTGAGGACTGCATCGGCATCGGCACTGAT TTCACCCAAGGCTACGGAACGCCGTTCTTCGAGTGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17882:1..786-

>mRNA_P-wetherbeei_contig17882.1.1 ID=mRNA_P-wetherbeei_contig17882.1.1|Name=mRNA_P-wetherbeei_contig17882.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=786bp|location=Sequence derived from alignment at P-wetherbeei_contig17882:1..786- (Phaeothamnion wetherbeei SAG_119_79)
ATGGATGCTGCCCAGTTGCACCGCGACGCCGTCGTCATCGACGGGCTTAT
CGTTTCTGATTTCAGCCGCGCCGTATTCGAAGACATGCGGCGCGGCGGGA
TCACGGCCGCCAACTGCACCTGCTGCGTGTGGGAGGATTTTCGCGACACC
ATGGCCAACGTCGCGCGCTGGAAAACCTGGTTCACGGACAACGCCGATCT
CATCACGCAGGTCTACACCACCGCCGACATTGCGCGCGCCAAGCGCGAGG
GGCGCGTGGGCATCATCCTCGGCTGGCAAAATCTATCGGGCATCGACGAC
CGGCTGGGCTACCTGCAGATCTTTCGCGAACTGGGCGTGCGCGTCATGCA
GATCACCTACAACACGCAGAATCTCGCCGGTTGCGGCTGCTATGAGAAAA
AAGACGGCGGCCTCAGCGATTTCGGGCACGAGGCCGTCGCGGAAATGAAC
CGGCTCGGCATCCTGTGCGACCTCTCGCATGTCGGGCCGCGTACCAGCGA
GGACGTGATCCGCGCCTCAAAAAAGCCGGTTGCCTATACGCACTGTTTGC
CGATGGGGCTCAAGCAGCATCCGCGCAACAAAACGGACGAGCAATTGAAG
TTCATCGCCGAACACGGCGGCTTTATCGGCGTCACGATGTTTCCGCCCTT
CCTGAAGCGCGGCAAGGACGCGACGGTGGACGACTACATCGAGGCCATTG
AATACGTTATCAACATCGCCGGTGAGGACTGCATCGGCATCGGCACTGAT
TTCACCCAAGGCTACGGAACGCCGTTCTTCGAGTGG
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