mRNA_P-wetherbeei_contig17881.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17881.4.1 vs. uniprot
Match: W2PSN5_PHYPN (Uncharacterized protein n=2 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2PSN5_PHYPN) HSP 1 Score: 178 bits (452), Expect = 1.690e-48 Identity = 102/223 (45.74%), Postives = 135/223 (60.54%), Query Frame = 3
Query: 3 LFPGHDQYQRFSAFLGRKASGTDNVFEVF--GVAAKDIGTHSARKGAATYAASGSTACPPIPAICLRAGWTVGPVQDRYIRYEAAGDQYVGRTVSGLPLSSHDFCVLPPHFKNLDGYGVPIPGVAELVAQAVCDCFGADLMPRLKPVAEFLLASVVYHREFLRRSLHATHPAWGNLLFVQEGLLERLAEHVVLRHDGDTLELRVSGIPPHVSILTSLRTVLTA 665
LFPG +QY+RF L R D E+ GV ++GTHS RKGAATY ASGSTACP ++ LRAGW++G VQ+ Y+RYE+AGD +VGRTVSGLP SH+F +LPPHF N D A++ +A +C +L L V EF LAS+VYH +LR L HP + LF L+ L+ V + L+ +GIPPHV+IL ++++L A
Sbjct: 186 LFPGSNQYERFRKCLQRLLESEDVAHELRRRGVHKDELGTHSMRKGAATYCASGSTACPSSTSVHLRAGWSLGGVQNTYLRYESAGDMHVGRTVSGLPPDSHEFAMLPPHFGNRD---------ADV--EAAIECVFPELPTNLTYVGEFCLASLVYHAPYLRTHLDPNHPLFETPLFQHPSLIADLSRKVTCNGN----RLQATGIPPHVAILEKMKSLLDA 393
BLAST of mRNA_P-wetherbeei_contig17881.4.1 vs. uniprot
Match: A0A225UJG8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UJG8_9STRA) HSP 1 Score: 175 bits (444), Expect = 3.990e-48 Identity = 100/220 (45.45%), Postives = 138/220 (62.73%), Query Frame = 3
Query: 3 LFPGHDQYQRFSAFLGRKASGTDNVFEVF--GVAAKDIGTHSARKGAATYAASGSTACPPIPAICLRAGWTVGPVQDRYIRYEAAGDQYVGRTVSGLPLSSHDFCVLPPHFKNLDGYGVPIPGVAELVAQAVCDCFGADLMPRLKPVAEFLLASVVYHREFLRRSLHATHPAWGNLLFVQEGLLERLAEHVVLRHDGDTLELRVSGIPPHVSILTSLRTV 656
LFPG+D+Y+ F LGR G D E+ G AA+DIGTHS RKGA+TY +SGSTACPP A+ LRAG ++G VQDRY+R++AAGD +VGRTVSGLP+ +F LPP F + D +V A CF + ++ VAE+ LAS+VYH +FLR+ L + HP + + LF L +L + + D L+ +G+PPHV IL+ +++V
Sbjct: 168 LFPGNDEYEPFRKVLGRTLKGADVAAELERRGTAAEDIGTHSMRKGASTYCSSGSTACPPSVAVHLRAGRSMGGVQDRYLRHDAAGDMFVGRTVSGLPILQPEFASLPPRFSSAD----------SVVQTAKNLCF-PGIPQNVQFVAEYALASLVYHIDFLRQHLSSDHPLFQSPLFADAELFLQLQSRIKSGSNDDGLQ--PTGVPPHVKILSEIQSV 374
BLAST of mRNA_P-wetherbeei_contig17881.4.1 vs. uniprot
Match: A0A0W8DHJ1_PHYNI (Cytosolic carboxypeptidase 3 n=6 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DHJ1_PHYNI) HSP 1 Score: 178 bits (451), Expect = 2.110e-47 Identity = 101/223 (45.29%), Postives = 132/223 (59.19%), Query Frame = 3
Query: 3 LFPGHDQYQRFSAFLGRKASGTDNVFEVF--GVAAKDIGTHSARKGAATYAASGSTACPPIPAICLRAGWTVGPVQDRYIRYEAAGDQYVGRTVSGLPLSSHDFCVLPPHFKNLDGYGVPIPGVAELVAQAVCDCFGADLMPRLKPVAEFLLASVVYHREFLRRSLHATHPAWGNLLFVQEGLLERLAEHVVLRHDGDTLELRVSGIPPHVSILTSLRTVLTA 665
LFPG +QY+RF L R D E+ GV ++GTHS RKGAATY ASGSTACP ++ LRAGW++G VQ+ Y+RYE+AGD +VGRTVSGLP SH+F +LPPHF N D +A +C +L L V EF LAS+VYH +LR L HP + LF L+ L+ V + L+ +GIPPHV+IL ++++L A
Sbjct: 276 LFPGSNQYERFRKCLQRLLESEDVAHELRRRGVHKDELGTHSMRKGAATYCASGSTACPSSTSVHLRAGWSLGGVQNTYLRYESAGDMHVGRTVSGLPPDSHEFAMLPPHFGNRD-----------TDVEAAIECVFPELPTNLTYVGEFCLASLVYHAPYLRTHLDPNHPLFETPLFQHPSLIADLSRKVTCNGN----RLQATGIPPHVAILEKMKSLLDA 483
BLAST of mRNA_P-wetherbeei_contig17881.4.1 vs. uniprot
Match: A0A0W8CSX0_PHYNI (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CSX0_PHYNI) HSP 1 Score: 178 bits (451), Expect = 8.830e-47 Identity = 101/223 (45.29%), Postives = 132/223 (59.19%), Query Frame = 3
Query: 3 LFPGHDQYQRFSAFLGRKASGTDNVFEVF--GVAAKDIGTHSARKGAATYAASGSTACPPIPAICLRAGWTVGPVQDRYIRYEAAGDQYVGRTVSGLPLSSHDFCVLPPHFKNLDGYGVPIPGVAELVAQAVCDCFGADLMPRLKPVAEFLLASVVYHREFLRRSLHATHPAWGNLLFVQEGLLERLAEHVVLRHDGDTLELRVSGIPPHVSILTSLRTVLTA 665
LFPG +QY+RF L R D E+ GV ++GTHS RKGAATY ASGSTACP ++ LRAGW++G VQ+ Y+RYE+AGD +VGRTVSGLP SH+F +LPPHF N D +A +C +L L V EF LAS+VYH +LR L HP + LF L+ L+ V + L+ +GIPPHV+IL ++++L A
Sbjct: 276 LFPGSNQYERFRKCLQRLLESEDVAHELRRRGVHKDELGTHSMRKGAATYCASGSTACPSSTSVHLRAGWSLGGVQNTYLRYESAGDMHVGRTVSGLPPDSHEFAMLPPHFGNRD-----------TDVEAAIECVFPELPTNLTYVGEFCLASLVYHAPYLRTHLDPNHPLFETPLFQHPSLIADLSRKVTCNGN----RLQATGIPPHVAILEKMKSLLDA 483
BLAST of mRNA_P-wetherbeei_contig17881.4.1 vs. uniprot
Match: A0A2P4X3B8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X3B8_9STRA) HSP 1 Score: 173 bits (439), Expect = 1.190e-46 Identity = 99/217 (45.62%), Postives = 131/217 (60.37%), Query Frame = 3
Query: 12 GHDQYQRFSAFLGRKASGTDNVFEVF--GVAAKDIGTHSARKGAATYAASGSTACPPIPAICLRAGWTVGPVQDRYIRYEAAGDQYVGRTVSGLPLSSHDFCVLPPHFKNLDGYGVPIPGVAELVAQAVCDCFGADLMPRLKPVAEFLLASVVYHREFLRRSLHATHPAWGNLLFVQEGLLERLAEHVVLRHDGDTLELRVSGIPPHVSILTSLRTV 656
G+ +Y+RF L R E+ G+ A D+GTHS RKGAATY ASGSTACP A+ LRAGW++G VQ+ Y+RYEAAGD +VGRTV+GLP SH+F +LPPHF+ D E V + V F + +L V E+ LAS+VYH FLRR L HP + LF LL +L++ V G T ++ +G+PPHV+IL ++ V
Sbjct: 163 GNVKYERFRKSLQRLLMDEQVAAELKRQGLHADDLGTHSMRKGAATYCASGSTACPSSTAVHLRAGWSLGGVQNTYLRYEAAGDMHVGRTVTGLPSGSHEFAILPPHFEQQD----------EWVYRGVVMVF-RGIPEQLVFVGEYCLASLVYHIPFLRRHLPLCHPLYETALFQDSELLVKLSDRVRCGFSGPTSSIKATGVPPHVAILGKMKAV 368
BLAST of mRNA_P-wetherbeei_contig17881.4.1 vs. uniprot
Match: V9E0Y5_PHYPR (Uncharacterized protein (Fragment) n=2 Tax=Phytophthora TaxID=4783 RepID=V9E0Y5_PHYPR) HSP 1 Score: 171 bits (432), Expect = 1.460e-46 Identity = 97/218 (44.50%), Postives = 126/218 (57.80%), Query Frame = 3
Query: 3 LFPGHDQYQRFSAFLGR--KASGTDNVFEVFGVAAKDIGTHSARKGAATYAASGSTACPPIPAICLRAGWTVGPVQDRYIRYEAAGDQYVGRTVSGLPLSSHDFCVLPPHFKNLDGYGVPIPGVAELVAQAVCDCFGADLMPRLKPVAEFLLASVVYHREFLRRSLHATHPAWGNLLFVQEGLLERLAEHVVLRHDGDTLELRVSGIPPHVSILTSLR 650
+FPG+DQY RF L R + G N E GV DIGTHS RKGAATY +SGSTACPP A+ LRAGW +G VQDRY+R+++AGD +VGRTVSGLP+ DF LPP FK G + V A CF L + +AE+ LAS++YH +L+ L HP + L E ++ L VV + +GIPPHV +L+ ++
Sbjct: 26 VFPGNDQYDRFRKTLRRALETPGLANELERVGVRCDDIGTHSMRKGAATYCSSGSTACPPAIAVHLRAGWALGGVQDRYLRHDSAGDMFVGRTVSGLPILKADFATLPPRFK----------GGRDQVEVAKRICF-RGLRRNVTLIAEYALASIIYHYAYLKEHLPEEHPLFQAPLMRNEQRIQDLRTFVVCGETSSEETVTATGIPPHVVLLSEIQ 232
BLAST of mRNA_P-wetherbeei_contig17881.4.1 vs. uniprot
Match: W2Y819_PHYPR (Uncharacterized protein n=4 Tax=Phytophthora parasitica TaxID=4792 RepID=W2Y819_PHYPR) HSP 1 Score: 174 bits (440), Expect = 2.070e-46 Identity = 98/219 (44.75%), Postives = 129/219 (58.90%), Query Frame = 3
Query: 3 LFPGHDQYQRFSAFLGR--KASGTDNVFEVFGVAAKDIGTHSARKGAATYAASGSTACPPIPAICLRAGWTVGPVQDRYIRYEAAGDQYVGRTVSGLPLSSHDFCVLPPHFKNLDGYGVPIPGVAELVAQAVCDCFGADLMPR-LKPVAEFLLASVVYHREFLRRSLHATHPAWGNLLFVQEGLLERLAEHVVLRHDGDTLELRVSGIPPHVSILTSLR 650
+FPG+DQY RF L R + G N E GV DIGTHS RKGAATY +SGSTACPP A+ LRAGW +G VQDRY+R+++AGD +VGRT+SGLP+ DF LPP FK G + V A CF +PR + P+AE+ LAS++YH +L+ L HP + L E ++ L VV + +GIPPHV +L+ ++
Sbjct: 146 VFPGNDQYDRFRKTLRRALETPGLANELERVGVRCDDIGTHSMRKGAATYCSSGSTACPPAIAVHLRAGWALGGVQDRYLRHDSAGDMFVGRTISGLPILKADFATLPPRFK----------GGRDQVEVAKRICFRG--LPRNVTPIAEYALASIIYHYAYLKEHLPEEHPLFQAPLMRNEQRIQDLRTFVVCGETSSEETVTATGIPPHVVLLSEIQ 352
BLAST of mRNA_P-wetherbeei_contig17881.4.1 vs. uniprot
Match: W2QUJ4_PHYPN (Uncharacterized protein n=3 Tax=Phytophthora parasitica TaxID=4792 RepID=W2QUJ4_PHYPN) HSP 1 Score: 170 bits (431), Expect = 4.290e-45 Identity = 98/219 (44.75%), Postives = 128/219 (58.45%), Query Frame = 3
Query: 3 LFPGHDQYQRFSAFLGR--KASGTDNVFEVFGVAAKDIGTHSARKGAATYAASGSTACPPIPAICLRAGWTVGPVQDRYIRYEAAGDQYVGRTVSGLPLSSHDFCVLPPHFKNLDGYGVPIPGVAELVAQAVCDCFGADLMPR-LKPVAEFLLASVVYHREFLRRSLHATHPAWGNLLFVQEGLLERLAEHVVLRHDGDTLELRVSGIPPHVSILTSLR 650
+FPG+DQY RF L R + G N E GV DIGTHS RKGAATY +SGSTACPP A+ LRAGW +G VQDRY+R+++AGD +VGRTVSGLP+ DF LPP FK G + V A CF +PR + +AE+ LAS++YH +L+ L HP + L E ++ L VV + +GIPPHV +L+ ++
Sbjct: 240 VFPGNDQYDRFRKTLRRALETPGLANELERVGVRCDDIGTHSMRKGAATYCSSGSTACPPAIAVHLRAGWALGGVQDRYLRHDSAGDMFVGRTVSGLPILKADFATLPPRFK----------GGRDQVEVAKRICFRG--LPRNVTLIAEYALASIIYHYAYLKEHLPEEHPLFQAPLMRNEQRIQDLRTFVVCGETSSEETVTATGIPPHVVLLSEIQ 446
BLAST of mRNA_P-wetherbeei_contig17881.4.1 vs. uniprot
Match: A0A2D4CK12_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CK12_PYTIN) HSP 1 Score: 160 bits (405), Expect = 1.950e-44 Identity = 88/184 (47.83%), Postives = 115/184 (62.50%), Query Frame = 3
Query: 3 LFPGHDQYQRFSAFLGRKASGTD--NVFEVFGVAAKDIGTHSARKGAATYAASGSTACPPIPAICLRAGWTVGPVQDRYIRYEAAGDQYVGRTVSGLPLSSHDFCVLPPHFKNLDGYGVPIPGVAELVAQAVCDCFGADLMPRLKPVAEFLLASVVYHREFLRRSLHATHPAWGNLLFVQEGLL 548
LFPG +QY+RF L R SGT+ + E G+ +IGTHS RKG+ATY +SGSTACP AI LRAGW++G V +RY+R++ AGD +VGRTV GLP DF VLPPHFK+ G + VA A+ CF L P K +AEF LAS+++H +L+ L HP + N + + LL
Sbjct: 28 LFPGSNQYERFRKLLSRVLSGTELKDELERRGIDPANIGTHSMRKGSATYCSSGSTACPSAIAIHLRAGWSMGGVTNRYLRHDGAGDMHVGRTVCGLPSDEPDFAVLPPHFKD---------GSSSAVATAIKLCF-PGLPPSAKGIAEFALASIIHHLPYLQHQLPVNHPLFENPILLSAPLL 201
BLAST of mRNA_P-wetherbeei_contig17881.4.1 vs. uniprot
Match: W2H2H5_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica TaxID=4792 RepID=W2H2H5_PHYPR) HSP 1 Score: 160 bits (406), Expect = 3.300e-44 Identity = 96/219 (43.84%), Postives = 127/219 (57.99%), Query Frame = 3
Query: 3 LFPGHDQYQRFSAFLGRKASGTDNVFEVF---GVAAKDIGTHSARKGAATYAASGSTACPPIPAICLRAGWTVGPVQDRYIRYEAAGDQYVGRTVSGLPLSSHDFCVLPPHFKNLDGYGVPIPGVAELVAQAVCDCFGADLMPRLKPVAEFLLASVVYHREFLRRSLHATHPAWGNLLFVQEGLLERLAEHVVLRHDGDTLELRVSGIPPHVSILTSLR 650
LFPG +QY+RF L ++ D V E GV ++GTHS RKGA TY AS STACP A+ LRAGW++G VQ+ Y+RYE+AGD +VGRTVSGLP SH+F VLPPHF+ D E + A+ DC + L + EF LAS+VYH +LR ++ HP + LF LL L + D L +G+PP+V+IL ++
Sbjct: 60 LFPGSNQYERFRKCL-QQLFDRDCVAEELHRRGVDRDELGTHSMRKGAVTYCASASTACPSSTAVHLRAGWSLGGVQNTYLRYESAGDMHVGRTVSGLPPDSHEFAVLPPHFEERD----------ETIENAI-DCVFPGMPANLTYIGEFCLASLVYHEPYLRLNIPKCHPLFEPPLFQHPTLLSDLLAKLRGIKDRSG-RLHATGVPPYVAILGKMK 265 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17881.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17881.4.1 >prot_P-wetherbeei_contig17881.4.1 ID=prot_P-wetherbeei_contig17881.4.1|Name=mRNA_P-wetherbeei_contig17881.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=114bp MPRLKPVAEFLLASVVYHREFLRRSLHATHPAWGNLLFVQEGLLERLAEHback to top mRNA from alignment at P-wetherbeei_contig17881:392..1313- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17881.4.1 ID=mRNA_P-wetherbeei_contig17881.4.1|Name=mRNA_P-wetherbeei_contig17881.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=922bp|location=Sequence derived from alignment at P-wetherbeei_contig17881:392..1313- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17881:392..1313- >mRNA_P-wetherbeei_contig17881.4.1 ID=mRNA_P-wetherbeei_contig17881.4.1|Name=mRNA_P-wetherbeei_contig17881.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=342bp|location=Sequence derived from alignment at P-wetherbeei_contig17881:392..1313- (Phaeothamnion wetherbeei SAG_119_79)back to top |