mRNA_P-wetherbeei_contig1787.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1787.1.1 vs. uniprot
Match: A0A835ZAE4_9STRA (RAP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAE4_9STRA) HSP 1 Score: 157 bits (396), Expect = 1.390e-42 Identity = 85/152 (55.92%), Postives = 106/152 (69.74%), Query Frame = 1
Query: 1 HLSVSHILKLMHIEHTVESEHDIDIA------------IVGHGL-LDPTNSAASSDAAAAGAGGPMSGTVRVRMAVEVDGPAHFTRNTRRILGHTVLKHRMLREMGWTVVQVPFHEYDPIPFWASMEKKRYLQRRLGIQRTMFFGSHDWSTY 417
HL VS L LM +EH ESEHDIDI +VG GL L +++ + D++A A V +R+A+EVDGP HFT N+RR LGHTVLKHR+L ++GWTVVQVPF+ +D IPFWASME+KRYLQR+LGI RT+ FG+ DWSTY
Sbjct: 401 HLDVSKCLALMGVEHRNESEHDIDIXXXXXXXXXXXXEVVGVGLRLMSSDNDNNEDSSAQQASPSEDDHVPLRVAIEVDGPGHFTCNSRRSLGHTVLKHRILAQLGWTVVQVPFYHWDRIPFWASMERKRYLQRKLGITRTIHFGARDWSTY 552
BLAST of mRNA_P-wetherbeei_contig1787.1.1 vs. uniprot
Match: A0A6H5K8K8_9PHAE (RAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K8_9PHAE) HSP 1 Score: 133 bits (334), Expect = 3.900e-36 Identity = 59/83 (71.08%), Postives = 72/83 (86.75%), Query Frame = 1
Query: 169 VRVRMAVEVDGPAHFTRNTRRILGHTVLKHRMLREMGWTVVQVPFHEYDPIPFWASMEKKRYLQRRLGIQRTMFFGSHDWSTY 417
VR+++A+EVDGPAHFT+NT R LGH VLKHR L +MGWTVV +PF E+DPIPFW+SMEKKRYLQR+LGI RT+FFG D S++
Sbjct: 142 VRLKLALEVDGPAHFTKNTARPLGHMVLKHRTLSKMGWTVVSIPFLEWDPIPFWSSMEKKRYLQRKLGITRTIFFGGTDCSSF 224
BLAST of mRNA_P-wetherbeei_contig1787.1.1 vs. uniprot
Match: A0A6T8NB22_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8NB22_9STRA) HSP 1 Score: 117 bits (293), Expect = 5.830e-31 Identity = 67/140 (47.86%), Postives = 85/140 (60.71%), Query Frame = 1
Query: 28 LMHIEHTVESEHDIDIAIVGHGLLDPTNSA----------ASSDAAAAGAGGPMSGTVRVRMAVEVDGPAHFTRNTRRILGHTVLKHRMLREMGWTVVQVPFHEYDPIPFWASMEKKRYLQRRLGIQRTMFFGSHDWSTY 417
LM I+H E + DID+AIV T++A S+ G SG V ++AVE DGP HFTRN RR LGHTVLK+R+L+ GWTVV+VP++E+D IPFWASME++RYLQR L + F D S Y
Sbjct: 2 LMRIKHYNEHDEDIDVAIVLRADSGWTHTAEFGECDDDLDCSAYHVNGGGYNSNSGNVHQKLAVEFDGPDHFTRNGRRALGHTVLKYRLLKMQGWTVVRVPYYEFDKIPFWASMERQRYLQRLLKTHPNLSFSQADVSEY 141
BLAST of mRNA_P-wetherbeei_contig1787.1.1 vs. uniprot
Match: D8LMC1_ECTSI (RAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMC1_ECTSI) HSP 1 Score: 122 bits (305), Expect = 1.630e-29 Identity = 54/73 (73.97%), Postives = 65/73 (89.04%), Query Frame = 1
Query: 169 VRVRMAVEVDGPAHFTRNTRRILGHTVLKHRMLREMGWTVVQVPFHEYDPIPFWASMEKKRYLQRRLGIQRTM 387
VR+++A+EVDGPAHFT+NT R LGH VLKHR L +MGWTVV +PF E+DPIPFW+SMEKKRYLQR+LGI RT+
Sbjct: 595 VRLKLALEVDGPAHFTKNTARPLGHMVLKHRTLSKMGWTVVSIPFLEWDPIPFWSSMEKKRYLQRKLGITRTI 667
BLAST of mRNA_P-wetherbeei_contig1787.1.1 vs. uniprot
Match: A0A7R9UGE3_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGE3_9STRA) HSP 1 Score: 109 bits (272), Expect = 2.340e-27 Identity = 60/162 (37.04%), Postives = 84/162 (51.85%), Query Frame = 1
Query: 1 HLSVSHILKLMHIEHTVESEHDIDIAIVGHGLLDPTNSAASSDAAAAGAGGPMSGTVRVRMAVEVDGPAHFTRNTRRILGHTVLKHRMLREMGWTVVQVPFHEYDPIPFWASMEKKRYL-----------------------QRRLGIQRTMFFGSHDWSTY 417
H SVSH L+ + + H E + D DI I G+ A+EVDGP H+TRNTRR LGHT LKHRMLR+ GW V Q+P++++D IPFW+SME+KRY+ QR++G+++ + F D+S+Y
Sbjct: 45 HESVSHALRGLGVRHQNEQDEDADIIIPSLGV-----------------------------ALEVDGPDHYTRNTRRSLGHTHLKHRMLRQRGWRVAQIPYYDFDRIPFWSSMERKRYMKAPLHRLQEEHESDCASVRHRFVQRKIGLRKVITFSDRDFSSY 177
BLAST of mRNA_P-wetherbeei_contig1787.1.1 vs. uniprot
Match: A0A1Z5JP87_FISSO (RAP domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JP87_FISSO) HSP 1 Score: 113 bits (282), Expect = 1.210e-26 Identity = 64/146 (43.84%), Postives = 88/146 (60.27%), Query Frame = 1
Query: 1 HLSVSHILKLMHIEHTVESEHDIDIAIVGHGLLDPTNSAASSDAAAAGAGGPMSGTVRVRMAVEVDGPAHFTRNTR-------RILGHTVLKHRMLREMGWTVVQVPFHEYDPIPFWASMEKKRYLQRRLGIQRTMFFGSHDWSTY 417
H S+S +L+LM + H E + DID+AI+ L + +D M GT +++AVE DGP HF R+T R LGHT LK+R+L+ GWTVV+VP++E+D IPFWASME++RYLQR L + F + D S Y
Sbjct: 359 HKSISDLLRLMGVAHVNEHDEDIDVAII---LKSQASWTHETDV--------MCGTAGMKVAVEFDGPTHFARSTGCHNKVLPRALGHTNLKYRILKRQGWTVVRVPYYEFDKIPFWASMERQRYLQRLLKTHVNIRFSNLDVSEY 493
BLAST of mRNA_P-wetherbeei_contig1787.1.1 vs. uniprot
Match: A0A7S0FIH3_9STRA (Hypothetical protein n=2 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FIH3_9STRA) HSP 1 Score: 109 bits (272), Expect = 1.670e-26 Identity = 65/143 (45.45%), Postives = 83/143 (58.04%), Query Frame = 1
Query: 1 HLSVSHILKLMHIEHTVESEHDIDIAIVGHGLLDPTNSAASSDAAAAGAGGPMSGTVRVRMAVEVDGPAHFTR----NTRRILGHTVLKHRMLREMGWTVVQVPFHEYDPIPFWASMEKKRYLQRRLGIQRTMFFGSHDWSTY 417
H S+S L LM + H E + DID+AI+ T++A D + ++AVE DGP HFTR N R LGHTVLK+R+L+ GWTVV+VPF E+D IPFWASME++RYLQR L + F D S Y
Sbjct: 131 HKSLSQTLDLMGVAHYNEHDEDIDVAIILKSESSWTHTAERGDHKES----------HHKVAVEFDGPNHFTRAVGSNKPRALGHTVLKYRILKRQGWTVVRVPFFEFDKIPFWASMERQRYLQRLLKTHADIRFSEIDVSEY 263
BLAST of mRNA_P-wetherbeei_contig1787.1.1 vs. uniprot
Match: A0A448Z2H7_9STRA (RAP domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z2H7_9STRA) HSP 1 Score: 113 bits (282), Expect = 2.270e-26 Identity = 70/163 (42.94%), Postives = 92/163 (56.44%), Query Frame = 1
Query: 1 HLSVSHILKLMHIEHTVESEHDIDIAIVGHGLLDPT---------NSAASSDAAAAGAGGPMSGTVRVRMAVEVDGPAHFTR---------------NTRRILGHTVLKHRMLREMGWTVVQVPFHEYDPIPFWASMEKKRYLQRRLGIQRTMFFGSHDWSTY 417
H S+S L+LM + H E E DID+AI+ L P + SS+AA + T V +A+E DGP HFTR NT R LGHTVLK+R+L++ GWTVV+VP++E+D IPFWASME++RYLQR+L + F D S Y
Sbjct: 814 HKSLSSTLELMGVSHINEHEEDIDVAII----LQPDAMWVHETDMDKDTSSEAAP-------NATDHVSVAIEFDGPNHFTRVRTEPQEPSGLPPRPNTPRALGHTVLKYRLLKQQGWTVVRVPYYEFDKIPFWASMERQRYLQRKLKTHANIKFSEVDVSEY 965
BLAST of mRNA_P-wetherbeei_contig1787.1.1 vs. uniprot
Match: A0A4D9DBM4_9STRA (RAP domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DBM4_9STRA) HSP 1 Score: 110 bits (276), Expect = 1.410e-25 Identity = 56/137 (40.88%), Postives = 79/137 (57.66%), Query Frame = 1
Query: 7 SVSHILKLMHIEHTVESEHDIDIAIVGHGLLDPTNSAASSDAAAAGAGGPMSGTVRVRMAVEVDGPAHFTRNTRRILGHTVLKHRMLREMGWTVVQVPFHEYDPIPFWASMEKKRYLQRRLGIQRTMFFGSHDWSTY 417
+V+ +L+ +HI H VE+EHDIDI + HG+ A+EVDGPAHF RNT +GHT++K R+L MG+ V+ VP E+D IP+W+SME KRYLQR+ + ++F D ST+
Sbjct: 612 AVAKVLESLHIRHRVEAEHDIDILLPEHGV-----------------------------ALEVDGPAHFLRNTGHPMGHTIMKRRLLELMGYNVISVPHFEFDRIPYWSSMELKRYLQRKCQTEEVLYFNDLDSSTH 719
BLAST of mRNA_P-wetherbeei_contig1787.1.1 vs. uniprot
Match: B7FRF5_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FRF5_PHATC) HSP 1 Score: 109 bits (273), Expect = 3.680e-25 Identity = 65/149 (43.62%), Postives = 84/149 (56.38%), Query Frame = 1
Query: 1 HLSVSHILKLMHIEHTVESEHDIDIAIVGHGLLDPTNSAASSDAAAAGAGGPMSGTVRVRMAVEVDGPAHFTRNTR----------RILGHTVLKHRMLREMGWTVVQVPFHEYDPIPFWASMEKKRYLQRRLGIQRTMFFGSHDWSTY 417
H S+S L LM I H E + DID+AIV T+ GT V++AVE DGP HFTR + R LGHTVLK+R+L++ GWTVV+VP++E+D IP+WASME++RYLQR L + F D S Y
Sbjct: 775 HRSLSQALDLMGIAHKNEHDEDIDVAIVLKKSAVWTHQTKRD------------GTEGVKLAVEFDGPNHFTRQRKPSNGSKPDVPRALGHTVLKYRLLKKQGWTVVRVPYYEFDKIPYWASMERQRYLQRLLKTHANLRFSQVDVSEY 911 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1787.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1787.1.1 >prot_P-wetherbeei_contig1787.1.1 ID=prot_P-wetherbeei_contig1787.1.1|Name=mRNA_P-wetherbeei_contig1787.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=129bp MHIEHTVESEHDIDIAIVGHGLLDPTNSAASSDAAAAGAGGPMSGTVRVRback to top mRNA from alignment at P-wetherbeei_contig1787:101..1090+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1787.1.1 ID=mRNA_P-wetherbeei_contig1787.1.1|Name=mRNA_P-wetherbeei_contig1787.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=990bp|location=Sequence derived from alignment at P-wetherbeei_contig1787:101..1090+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1787:101..1090+ >mRNA_P-wetherbeei_contig1787.1.1 ID=mRNA_P-wetherbeei_contig1787.1.1|Name=mRNA_P-wetherbeei_contig1787.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=387bp|location=Sequence derived from alignment at P-wetherbeei_contig1787:101..1090+ (Phaeothamnion wetherbeei SAG_119_79)back to top |