mRNA_P-wetherbeei_contig17867.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17867.1.1
Unique NamemRNA_P-wetherbeei_contig17867.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17867.1.1 vs. uniprot
Match: A0A7S2P8T3_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P8T3_9STRA)

HSP 1 Score: 182 bits (461), Expect = 3.980e-49
Identity = 96/227 (42.29%), Postives = 134/227 (59.03%), Query Frame = 1
Query:    1 WNGGMRRHLSDMLSQHIGDFPLRLRQQPVGPYQYCPLPNIKYQNLEGEIYLRGYYLRGLCDAKRFPDWPVAEPVLVLRAVVEAWRAVMAR---HAGDSGGGGSETLGIAAGCGGVELRRAYRSLARRYHPDRNPQGREQFVRVQEAYELLLQN-EADLAAHGGXXXXXXXXXXXXXXXXVA-----RIVVMVQVMAVQQVSLCQRYSAQLQSFKYPAYPLVMQASAI 654
            WN  MR+HL +M+ QH+GDFP+RLRQ     Y+YCP+P I Y+ LE EI+   YYL  LCD  RFPDWP+ EPV V RA +E+W+  M+R      D      +TLG+  G G  ELR+AYRSLAR+YHPD+NP GRE F ++Q AYELLL   EA     GG                       + +  ++++   Q+ +C+R+  ++  +KYPAY +++   +I
Sbjct: 1388 WNFQMRKHLVEMIQQHLGDFPMRLRQNNTAKYEYCPMPGIAYKRLESEIFCHNYYLENLCDEVRFPDWPITEPVEVFRACLESWKRQMSRDQEEEEDLQDDARKTLGLHVGDGASELRKAYRSLARKYHPDKNPAGREMFEKIQVAYELLLPIVEAGGKIQGGEDGDSDDEGATDDGCAKGIGGGVQGMSAMKLLMKTQIIICRRHRDEIGIYKYPAYQMLLSCLSI 1614          
BLAST of mRNA_P-wetherbeei_contig17867.1.1 vs. uniprot
Match: A0A7S4JCS6_9STRA (Hypothetical protein (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JCS6_9STRA)

HSP 1 Score: 174 bits (441), Expect = 1.660e-46
Identity = 98/232 (42.24%), Postives = 129/232 (55.60%), Query Frame = 1
Query:    1 WNGGMRRHLSDMLSQHIGDFPLRLRQQPVGPYQYCPLPNIKYQNLEGEIYLRGYYLRGLCDAKRFPDWPVAEPVLVLRAVVEAWRAVMARHAG---DSGGGGSETLGIAAGCGGVELRRAYRSLARRYHPDRNPQGREQFVRVQEAYELLLQ----------NEADLAAHGGXXXXXXXXXXXXXXXXVA------RIVVMVQVMAVQQVSLCQRYSAQLQSFKYPAYPLVM 639
            WN  MRR L DM++QH+GDFP RL Q     Y+YCP P + Y  LEGE + RGYYLR L D  +F +WPV  P  V R+++E WR + ++ A    D   G    LG+  G GGVELR+AYR LARRYHPDRNP GRE F R+Q +YELLL           +   L + GG                        R +  V ++   Q+ +C+RYSA +  +KYPAY +++
Sbjct:  622 WNPLMRRRLIDMMNQHLGDFPFRLGQHTNACYEYCPAPGVSYVQLEGETFCRGYYLRNLVDETKFGEWPVTHPSAVFRSILEEWRKLTSKDASKEEDEREGARRVLGLKDGDGGVELRKAYRGLARRYHPDRNPAGREMFERIQTSYELLLPVVECGGKISISGPALDSVGGEDGAEGATADKTDVDVSLGLGGGWRRMRDVLLLLRAQLLICRRYSADIGKYKYPAYKMLL 853          
BLAST of mRNA_P-wetherbeei_contig17867.1.1 vs. uniprot
Match: A0A7S4ACL7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ACL7_9STRA)

HSP 1 Score: 163 bits (413), Expect = 6.530e-46
Identity = 87/225 (38.67%), Postives = 128/225 (56.89%), Query Frame = 1
Query:    1 WNGGMRRHLSDMLSQHIGDFPLRLRQQPVGPYQYCPLPNIKYQNLEGEIYLRGYYLRGLCDAKRFPDWPVAEPVLVLRAVVEAWRAVMARHAGDSGGGGSET---LGIAAGCGGVELRRAYRSLARRYHPDRNPQGREQFVRVQEAYELLL---------QNEADLAAHGGXXXXXXXXXXXXXXXXVARIVVMVQVMAVQQVSLCQRYSAQLQSFKYPAYPLVM 639
            W+  MR+HL +M+ QH+GDFP RL Q     Y+YCP+P++ Y+ LE EI+   YYLR LCD  RFPDWP++EPV V R+ +E ++  M R   D      E    L +  G    +LR++YR LAR+YHPD+NP GRE F  VQ+AYELLL         +   D    G                 ++++  + Q++   Q+ +C+R+ A++  +KYPAY  ++
Sbjct:    7 WDLEMRKHLIEMVRQHLGDFPKRLWQNTTTQYEYCPMPSVAYKRLEKEIFCHNYYLRNLCDEVRFPDWPISEPVEVFRSCLEEFKKQMNRDESDEEEALKEATKILNLKRGDASKDLRKSYRMLARKYHPDKNPAGREMFEAVQKAYELLLPIIESGQELRIFHDQGGEGNEDGNRLLNSAEGFSGGISQMETL-QLLIKTQILVCKRFEAEIGKYKYPAYQFLL 230          
BLAST of mRNA_P-wetherbeei_contig17867.1.1 vs. uniprot
Match: A0A482SZ65_9ARCH (J domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SZ65_9ARCH)

HSP 1 Score: 168 bits (426), Expect = 1.920e-44
Identity = 85/219 (38.81%), Postives = 129/219 (58.90%), Query Frame = 1
Query:    1 WNGGMRRHLSDMLSQHIGDFPLRLRQQPVGPYQYCPLPNIKYQNLEGEIYLRGYYLRGLCDAKRFPDWPVAEPVLVLRAVVEAWRAVMARHAGDSG-GGGSETLGIAAGCGGVELRRAYRSLARRYHPDRNPQGREQFVRVQEAYELLLQNEADLAAHGGXXXXXXXXXXXXXXXXVARIVVMVQVMAVQQVSLCQRYSAQLQSFKYPAYPLVMQASAI 654
            WN  +RRHL +M+  H+GDF  RLRQ  +G Y+YCP+P I YQ+L+ E+Y+  YYLR LCD  RFPDWP+ EP+L+LR  +E WR  M +   DS      + L +       +LR+AY++LAR+YHPD+NP GR+ F ++Q+AYELL   E  +                     +  ++++++     Q+ L +R+   +   KYPAY L+++ + I
Sbjct: 1363 WNAELRRHLVEMVEAHLGDFSARLRQHSLGTYEYCPIPKIHYQSLDRELYVHEYYLRNLCDEMRFPDWPIGEPLLLLRECLERWREEMTKGIPDSAVSEAKKILSLPDRFDNADLRKAYKNLARQYHPDKNPAGRDMFEKIQKAYELLSSVELQVTE-----------------TDLNNVLLLIKT----QIILYRRFPGNIGDQKYPAYSLLVEVTKI 1560          
BLAST of mRNA_P-wetherbeei_contig17867.1.1 vs. uniprot
Match: A0A7S1Y5G6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y5G6_9STRA)

HSP 1 Score: 164 bits (414), Expect = 7.970e-44
Identity = 79/151 (52.32%), Postives = 100/151 (66.23%), Query Frame = 1
Query:    1 WNGGMRRHLSDMLSQHIGDFPLRLRQQPVGPYQYCPLPNIKYQNLEGEIYLRGYYLRGLCDAKRFPDWPVAEPVLVLRAVVEAWRAVMARHAG---DSGGGGSETLGIAAGCGGVELRRAYRSLARRYHPDRNPQGREQFVRVQEAYELLL 444
            WN  MR+HL +M+ QH+GDFP RL Q     Y+YCPLP I Y+ LE EI+   YYL  LCD  RFP+WP+AEPV V R+ +E W+  M R      D+     + L +  G G  ELR+AYR+LAR+YHPD+NP GRE F ++Q AYELLL
Sbjct:  417 WNLEMRKHLIEMIRQHLGDFPSRLWQNTTTEYEYCPLPGIAYKRLEKEIFCHNYYLDNLCDESRFPNWPIAEPVEVFRSCLEEWKQQMYRDESKEADAKEDARKVLDLQTGDGSKELRKAYRNLARKYHPDKNPAGREMFEKIQAAYELLL 567          
BLAST of mRNA_P-wetherbeei_contig17867.1.1 vs. uniprot
Match: A0A7R9U838_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U838_9STRA)

HSP 1 Score: 163 bits (412), Expect = 1.310e-42
Identity = 98/229 (42.79%), Postives = 124/229 (54.15%), Query Frame = 1
Query:    1 WNGGMRRHLSDMLSQHIGDFPLRLRQQPVGPYQYCPLPNIKYQNLEGEIYLRGYYLRGLCDAKRFPDWPVAEPVLVLRAVVEAWRAVMARHAGDSGGGGSET---------------LGIAAGCGGVELRRAYRSLARRYHPDRNPQGREQFVRVQEAYELLLQNEADLA-AHGGXXXXXXXXXXXXXXXXVARIVVMVQVMAVQQVSLCQRYSAQLQSFKYPAYPLVM 639
            W   MR  L D+L QH+GDFPLRLRQ P+  Y Y P P I Y  LE E++   YYLR LCD +RFPDWPV+EPV +L A +E  R  M R   D   G   T               LG+  G G  +LR+AYR+LAR+YHPDRNPQGRE F  VQ AYELL   +A  A A                     R+++  Q+M  +      R+S  +  +KYPA+PL++
Sbjct:  265 WGPKMRERLIDLLGQHLGDFPLRLRQHPLLQYDYTPCPTIVYPQLEDELFCHNYYLRLLCDERRFPDWPVSEPVKLLYAALEFHRDEM-RSPLDGAAGRDRTSQRDGSLSYDQALELLGLKIGFGERDLRKAYRTLARKYHPDRNPQGREMFEEVQAAYELLTSPKAKKALAMRAKRSATSAADEDEPDMDRLRLILHAQMMVYR------RFSDVVMDYKYPAFPLLL 486          
BLAST of mRNA_P-wetherbeei_contig17867.1.1 vs. uniprot
Match: A0A1E7FFA6_9STRA (J domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FFA6_9STRA)

HSP 1 Score: 160 bits (406), Expect = 9.470e-42
Identity = 86/233 (36.91%), Postives = 130/233 (55.79%), Query Frame = 1
Query:    1 WNGGMRRHLSDMLSQHIGDFPLRLRQQPVGPYQYCPLPNIKYQNLEGEIYLRGYYLRGLCDAKRFPDWPVAEPVLVLRAVVEAWRAVMARHAGDSGGGGSET---LGIAAGCGGVELRRAYRSLARRYHPDRNPQGREQFVRVQEAYELLL---QNEADLAAH--------------GGXXXXXXXXXXXXXXXXVARIVVMVQVMAVQQVSLCQRYSAQLQSFKYPAYPLVM 639
            W+  MR+HL +M+ QH+GDFP RL Q     Y+YCP+P++ Y+ LE EI+   YYL+ LCD  RFP+WP++EPV V R+ +E ++  M R+  D      E+   L + AG    +LR+AYR +AR+YHPD+NP GR+ F  +Q+AYELLL    NE ++                 GG                  +++V  Q++      +C+R+   +  +KYPAY L++
Sbjct: 1475 WDLDMRKHLIEMVRQHLGDFPKRLWQNTTTQYEYCPMPSVAYKRLEKEIFCHNYYLKNLCDETRFPNWPISEPVEVFRSCLEEFKKQMNRNESDEEQALQESTKILNLKAGDTSKDLRKAYRMMARKYHPDKNPAGRDMFEAIQKAYELLLPIIDNEQEMRIFDVSGIEDDKEGNTTGGCSNSAEGFTGGRSQMETLQLLVKTQIL------ICKRFETDIGKYKYPAYQLLL 1701          
BLAST of mRNA_P-wetherbeei_contig17867.1.1 vs. uniprot
Match: A0A1Z5KL67_FISSO (DnaJ homolog subfamily C member 13 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KL67_FISSO)

HSP 1 Score: 160 bits (404), Expect = 1.760e-41
Identity = 85/219 (38.81%), Postives = 125/219 (57.08%), Query Frame = 1
Query:    1 WNGGMRRHLSDMLSQHIGDFPLRLRQQPVGPYQYCPLPNIKYQNLEGEIYLRGYYLRGLCDAKRFPDWPVAEPVLVLRAVVEAWRAVMARHAG---DSGGGGSETLGIAAGCGGVELRRAYRSLARRYHPDRNPQGREQFVRVQEAYELL---LQNEADLAAHGGXXXXXXXXXXXXXXXXVARIVVMVQVMAVQQVSLCQRYSAQLQSFKYPAYPLVM 639
            W   MR+HL +M  QH+GDFPLRL Q     Y+YCP+P + Y  LE E++   YYL  LCD  RFPDWP+AEPV V R+ +E ++  ++   G   D+     + L +  G    ELR+AYR LAR YHPD+NP GR+ F  +Q +YELL   L+    +A   G                +A +   +Q++   Q+ +C+RY  +++ +KYPAY +++
Sbjct: 1499 WTFEMRKHLIEMTRQHLGDFPLRLFQNNGTDYEYCPMPGVAYPRLEKEVFCHNYYLCNLCDEGRFPDWPMAEPVEVFRSCLEHFKKFLSEEYGSSEDAQDRARQILELKVGDSIKELRKAYRRLARVYHPDKNPSGRDMFESIQASYELLQPLLEGGGKIAPFDGTSDPNLDAEAHDGLFFIASMK-NIQILIQAQLLICRRYEKEMRRYKYPAYQVLL 1716          
BLAST of mRNA_P-wetherbeei_contig17867.1.1 vs. uniprot
Match: A0A448YXQ5_9STRA (J domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YXQ5_9STRA)

HSP 1 Score: 159 bits (403), Expect = 2.350e-41
Identity = 88/224 (39.29%), Postives = 125/224 (55.80%), Query Frame = 1
Query:    1 WNGGMRRHLSDMLSQHIGDFPLRLRQQPVGPYQYCPLPNIKYQNLEGEIYLRGYYLRGLCDAKRFPDWPVAEPVLVLRAVVEAWRAVMARHAGDSGGGGSET---LGIAAGCGGVELRRAYRSLARRYHPDRNPQGREQFVRVQEAYELLL----QNEADLAAH----GGXXXXXXXXXXXXXXXXVARIVVMVQVMAVQQVSLCQRYSAQLQSFKYPAYPLVM 639
            W+  MR+HL +M+ QH+GDFP RL Q     Y+YCP+P++ Y+ L+ EI+   YYLR LCD  RFPDWP++EPV V R+ +E ++  M R   D      E    L +  G    ELR++YR LAR+YHPD+NP GRE F  VQ+AYELLL      +     H    G                     +  +Q++   QV +C+R+  ++  +KYPAY L++
Sbjct: 1486 WDLEMRKHLIEMVRQHLGDFPKRLWQNTTTQYEYCPMPSVAYKRLKKEIFCHNYYLRNLCDEVRFPDWPISEPVEVFRSCLEEFKKQMYRDESDEEEALQEATKILSLKPGDSSKELRKSYRMLARKYHPDKNPAGREMFEAVQKAYELLLPIIESGQKLKIFHDQGVGANDYGNVSSNCAEGFSGGRSQMETLQLLIKTQVLICRRFEVEIGKYKYPAYQLLL 1709          
BLAST of mRNA_P-wetherbeei_contig17867.1.1 vs. uniprot
Match: A0A7S1FVR6_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FVR6_9STRA)

HSP 1 Score: 154 bits (390), Expect = 1.310e-39
Identity = 89/225 (39.56%), Postives = 121/225 (53.78%), Query Frame = 1
Query:    1 WNGGMRRHLSDMLSQHIGDFPLRLRQQPVGPYQYCPLPNIKYQNLEGEIYLRGYYLRGLCDAKRFPDWPVAEPVLVLRAVVEAWRAVMARHAGDSGGGGSE---TLGIAAGCGGVELRRAYRSLARRYHPDRNPQGREQFVRVQEAYELLL---------QNEADLAAHGGXXXXXXXXXXXXXXXXVARIVVMVQVMAVQQVSLCQRYSAQLQSFKYPAYPLVM 639
            W   MRRHL  M+ QH+GDFP RLR+     Y+YCP+P I Y+ L+ EI+   YYL  LCD  RF DWPV EPV V RA +E  +  + R          E   TL + AG  G  LR+AYR LAR+YHPD+NP GR+ F +++ AYELLL         Q +   A                    +  + ++++     QV LCQRY  ++  +KYPAY +++
Sbjct: 1398 WTFDMRRHLVAMIQQHLGDFPQRLRENTTAKYEYCPVPGINYRRLDREIFCHNYYLHSLCDQVRFKDWPVEEPVEVFRACLENLKQELCRDQVREETAQEEARKTLRLEAGDTGDHLRKAYRKLARQYHPDKNPGGRDMFEKIKGAYELLLPVVEGGGKIQGDTREARAEEEMEDGSAEGIAGGTAALHALGLLIKT----QVLLCQRYPEEIGVYKYPAYSMLL 1618          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17867.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2P8T3_9STRA3.980e-4942.29Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
A0A7S4JCS6_9STRA1.660e-4642.24Hypothetical protein (Fragment) n=2 Tax=Odontella ... [more]
A0A7S4ACL7_9STRA6.530e-4638.67Hypothetical protein (Fragment) n=1 Tax=Pseudo-nit... [more]
A0A482SZ65_9ARCH1.920e-4438.81J domain-containing protein n=1 Tax=archaeon TaxID... [more]
A0A7S1Y5G6_9STRA7.970e-4452.32Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A7R9U838_9STRA1.310e-4242.79Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A1E7FFA6_9STRA9.470e-4236.91J domain-containing protein n=1 Tax=Fragilariopsis... [more]
A0A1Z5KL67_FISSO1.760e-4138.81DnaJ homolog subfamily C member 13 n=2 Tax=Fistuli... [more]
A0A448YXQ5_9STRA2.350e-4139.29J domain-containing protein n=1 Tax=Pseudo-nitzsch... [more]
A0A7S1FVR6_9STRA1.310e-3939.56Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17867contigP-wetherbeei_contig17867:506..1397 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog126957.SMAR002929-PA
Preferred nameDNAJC13
PFAMsDUF4339,DnaJ
Model size657
Max annot lvl33208|Metazoa
KEGG koko:K09533
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000323,GO:0001667,GO:0001775,GO:0002064,GO:0002065,GO:0002066,GO:0002119,GO:0002164,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005766,GO:0005768,GO:0005769,GO:0005770,GO:0005773,GO:0005774,GO:0005829,GO:0005886,GO:0006810,GO:0006887,GO:0006897,GO:0006898,GO:0006928,GO:0006955,GO:0006996,GO:0007032,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007297,GO:0007298,GO:0007610,GO:0007638,GO:0008104,GO:0008150,GO:0009605,GO:0009612,GO:0009628,GO:0009790,GO:0009791,GO:0009792,GO:0009888,GO:0009987,GO:0010008,GO:0010256,GO:0010631,GO:0012505,GO:0012506,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016477,GO:0016482,GO:0019953,GO:0022412,GO:0022414,GO:0030141,GO:0030154,GO:0030659,GO:0030667,GO:0030707,GO:0030855,GO:0031090,GO:0031410,GO:0031901,GO:0031982,GO:0032386,GO:0032501,GO:0032502,GO:0032504,GO:0032879,GO:0032940,GO:0033036,GO:0034613,GO:0035418,GO:0035577,GO:0036230,GO:0040011,GO:0042119,GO:0042147,GO:0042582,GO:0042802,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043299,GO:0043312,GO:0044422,GO:0044424,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045022,GO:0045055,GO:0045321,GO:0046903,GO:0046907,GO:0048468,GO:0048477,GO:0048609,GO:0048856,GO:0048869,GO:0048870,GO:0050789,GO:0050794,GO:0050896,GO:0051049,GO:0051087,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051674,GO:0051704,GO:0055037,GO:0060341,GO:0060429,GO:0060627,GO:0065007,GO:0070727,GO:0071840,GO:0071944,GO:0072657,GO:0090130,GO:0090132,GO:0097708,GO:0098588,GO:0098657,GO:0098805,GO:0098852,GO:0098927,GO:0099503,GO:1902954,GO:1903539,GO:1903649,GO:1990778,GO:2000641
Exons3
Evalue6.95e-32
EggNOG OGsKOG1789@1|root,KOG1789@2759|Eukaryota,38DQ3@33154|Opisthokonta,3BATN@33208|Metazoa,3CUGW@33213|Bilateria,41X59@6656|Arthropoda
DescriptiondnaJ homolog subfamily C member
Cds size645
COG categoryO
BRITEko00000,ko03041,ko03110
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186129.3512816-CDS-P-wetherbeei_contig17867:505..5951683186129.3512816-CDS-P-wetherbeei_contig17867:505..595Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17867 506..595 -
1683186129.3657176-CDS-P-wetherbeei_contig17867:767..10331683186129.3657176-CDS-P-wetherbeei_contig17867:767..1033Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17867 768..1033 -
1683186129.3778536-CDS-P-wetherbeei_contig17867:1096..13851683186129.3778536-CDS-P-wetherbeei_contig17867:1096..1385Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17867 1097..1385 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186129.3871377-UTR-P-wetherbeei_contig17867:1385..13971683186129.3871377-UTR-P-wetherbeei_contig17867:1385..1397Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig17867 1386..1397 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17867.1.1prot_P-wetherbeei_contig17867.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17867 506..1385 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17867.1.1

>prot_P-wetherbeei_contig17867.1.1 ID=prot_P-wetherbeei_contig17867.1.1|Name=mRNA_P-wetherbeei_contig17867.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=215bp
MRRHLSDMLSQHIGDFPLRLRQQPVGPYQYCPLPNIKYQNLEGEIYLRGY
YLRGLCDAKRFPDWPVAEPVLVLRAVVEAWRAVMARHAGDSGGGGSETLG
IAAGCGGVELRRAYRSLARRYHPDRNPQGREQFVRVQEAYELLLQNEADL
AAHGGHGGSGEGGSGGGGDDGVARIVVMVQVMAVQQVSLCQRYSAQLQSF
KYPAYPLVMQASAI*
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mRNA from alignment at P-wetherbeei_contig17867:506..1397-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17867.1.1 ID=mRNA_P-wetherbeei_contig17867.1.1|Name=mRNA_P-wetherbeei_contig17867.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=892bp|location=Sequence derived from alignment at P-wetherbeei_contig17867:506..1397- (Phaeothamnion wetherbeei SAG_119_79)
TGGAACGGCGGCATGCGGCGGCACCTCTCCGACATGCTCTCGCAGCACAT CGGTGACTTCCCACTTCGCCTCCGCCAACAGCCGGTGGGCCCTTATCAGT ATTGCCCACTGCCCAACATCAAGTACCAGAACCTCGAGGGCGAAATCTAC CTGCGCGGCTACTACCTTCGGGGCCTCTGCGACGCCAAGCGGTTCCCGGA CTGGCCCGTGGCGGAGCCGGTGCTCGTCCTGCGGGCGGTCGTCGAGGCCT GGCGCGCCGTCATGGCTCGACACGCCGGCGACAGCGGCGGTGGCGGCTCC GGTGGCGCTGCAGGCGGCGGCGGCGGGGCGCGGGGTTTGGGGCTGACGAC CGTGGCGGCCGCAGAAACGCTAGGCATAGCAGCCGGCTGCGGTGGCGTGG AACTGCGGCGGGCGTACCGGAGCCTGGCGAGGCGGTACCACCCGGACCGG AACCCGCAGGGGCGGGAGCAGTTCGTGCGCGTGCAGGAGGCGTACGAGCT GCTGCTGCAAAACGAGGCGGACCTGGCGGCACACGGCGGCCACGGCGGCA GCGGGGAGGGCGGCAGCGGCGGCGGAGGGGACGACGGGGTGGCGAGGATT GTCGTCATGGTGCAGGTTATGGCGGTGCAGGTGAGGCGGGAGCCGGGGGG ACTTGCTGGATGAATTGTTTGGCTTGTAGGGTTTTAGGCACAGCAGTTGA TGTTGTTTCTACTTCAGCGCGTTTTTGTACCTCAGTCTCTGATCTCCGCC TTTTTCCGGCGTTCACCACTCACGTTCTCCATTTGTCTTGTTGCCACCCG AGCAGGTCTCGCTGTGCCAAAGGTACTCGGCGCAGCTGCAAAGCTTCAAG TACCCCGCGTACCCTCTGGTCATGCAGGCAAGTGCAATATAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17867:506..1397-

>mRNA_P-wetherbeei_contig17867.1.1 ID=mRNA_P-wetherbeei_contig17867.1.1|Name=mRNA_P-wetherbeei_contig17867.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=645bp|location=Sequence derived from alignment at P-wetherbeei_contig17867:506..1397- (Phaeothamnion wetherbeei SAG_119_79)
ATGCGGCGGCACCTCTCCGACATGCTCTCGCAGCACATCGGTGACTTCCC
ACTTCGCCTCCGCCAACAGCCGGTGGGCCCTTATCAGTATTGCCCACTGC
CCAACATCAAGTACCAGAACCTCGAGGGCGAAATCTACCTGCGCGGCTAC
TACCTTCGGGGCCTCTGCGACGCCAAGCGGTTCCCGGACTGGCCCGTGGC
GGAGCCGGTGCTCGTCCTGCGGGCGGTCGTCGAGGCCTGGCGCGCCGTCA
TGGCTCGACACGCCGGCGACAGCGGCGGTGGCGGCTCCGAAACGCTAGGC
ATAGCAGCCGGCTGCGGTGGCGTGGAACTGCGGCGGGCGTACCGGAGCCT
GGCGAGGCGGTACCACCCGGACCGGAACCCGCAGGGGCGGGAGCAGTTCG
TGCGCGTGCAGGAGGCGTACGAGCTGCTGCTGCAAAACGAGGCGGACCTG
GCGGCACACGGCGGCCACGGCGGCAGCGGGGAGGGCGGCAGCGGCGGCGG
AGGGGACGACGGGGTGGCGAGGATTGTCGTCATGGTGCAGGTTATGGCGG
TGCAGCAGGTCTCGCTGTGCCAAAGGTACTCGGCGCAGCTGCAAAGCTTC
AAGTACCCCGCGTACCCTCTGGTCATGCAGGCAAGTGCAATATAG
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