mRNA_P-wetherbeei_contig1.7.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1.7.1
Unique NamemRNA_P-wetherbeei_contig1.7.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1.7.1 vs. uniprot
Match: A0A2R4QQ80_9PHAE (NADH dehydrogenase subunit 9 n=3 Tax=Fucus TaxID=3011 RepID=A0A2R4QQ80_9PHAE)

HSP 1 Score: 243 bits (620), Expect = 1.000e-79
Identity = 108/159 (67.92%), Postives = 131/159 (82.39%), Query Frame = 1
Query:    4 EFSIKIHPSHLLATLLFLRDHSGTQYKILTAISGVDYPEQWQRFEVVYELLSIRYNHRIRVKCGVNELTPLPSSVEIYPSANWWEREIWDLYGVFFTNHPDMRRILTDYGFEGHPLRKDFPLSGYVELRYDDSQKRVVCEPIELAQEFRDYDTLSPWSK 480
            E  I +   +LLATL+FL  HS + Y++LT+ISGVDYPE+ +RFE+VY+LL+IR N RIR+K   +E+ PLPS V IYPSANWWEREIWDL+GVFF+ HPD+RR+LTDYGFEGHPLRKDFPLSGY ELRYD+ Q+ VVCEPIEL QEFR +D   PWS+
Sbjct:   27 EIVINVSKKYLLATLMFLHHHSNSNYQLLTSISGVDYPERDERFEIVYDLLNIRSNSRIRIKTQTDEINPLPSVVSIYPSANWWEREIWDLFGVFFSGHPDLRRLLTDYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCEPIELTQEFRTFDFHIPWSQ 185          
BLAST of mRNA_P-wetherbeei_contig1.7.1 vs. uniprot
Match: A0A0K2RWJ9_9STRA (NADH dehydrogenase subunit 9 n=1 Tax=Triparma laevis TaxID=1534972 RepID=A0A0K2RWJ9_9STRA)

HSP 1 Score: 239 bits (610), Expect = 3.570e-78
Identity = 105/159 (66.04%), Postives = 131/159 (82.39%), Query Frame = 1
Query:    1 SEFSIKIHPSHLLATLLFLRDHSGTQYKILTAISGVDYPEQWQRFEVVYELLSIRYNHRIRVKCGVNELTPLPSSVEIYPSANWWEREIWDLYGVFFTNHPDMRRILTDYGFEGHPLRKDFPLSGYVELRYDDSQKRVVCEPIELAQEFRDYDTLSPWS 477
            SE  + + P HL++TL FL++ +  QYK+LT ISGVDYP +  RFEVVYELLS+ +N RIRVK  V E+  + S+V +YP+A+WWEREIWDL+GVFF NHPD+RRILTDYGFEGHPLRKDFPLSGYVE+RYD+ +KRVVCEP+  AQEFR++D  SPW+
Sbjct:   32 SELILTVSPKHLISTLFFLKNSTAHQYKLLTCISGVDYPGRTDRFEVVYELLSLTFNSRIRVKTHVGEINSVDSAVALYPAADWWEREIWDLFGVFFKNHPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYDERKKRVVCEPLSFAQEFRNFDFNSPWN 190          
BLAST of mRNA_P-wetherbeei_contig1.7.1 vs. uniprot
Match: A0A0U1Z5T2_9PHAE (NADH dehydrogenase subunit 9 n=22 Tax=Sargassaceae TaxID=3014 RepID=A0A0U1Z5T2_9PHAE)

HSP 1 Score: 239 bits (610), Expect = 3.810e-78
Identity = 107/160 (66.88%), Postives = 128/160 (80.00%), Query Frame = 1
Query:    4 EFSIKIHPSHLLATLLFLRDHSGTQYKILTAISGVDYPEQWQRFEVVYELLSIRYNHRIRVKCGVNELTPLPSSVEIYPSANWWEREIWDLYGVFFTNHPDMRRILTDYGFEGHPLRKDFPLSGYVELRYDDSQKRVVCEPIELAQEFRDYDTLSPWSKI 483
            E  I +   +LLA L FL  HS + + +LT+ISGVDYP++ +RFEVVYELL++R N RIR+K   +E+ PLPS VEIYPSANWWERE+WDL GVFF+ HPD+RRILTDYGFEGHPLRKDFPLSGY ELRYD+ Q+ VVCEPIEL QEFR +D   PWS +
Sbjct:   27 EIVINVSKKYLLAALTFLHHHSNSNFHLLTSISGVDYPDREERFEVVYELLNLRSNSRIRIKTCTDEINPLPSIVEIYPSANWWEREVWDLLGVFFSGHPDLRRILTDYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCEPIELTQEFRSFDFHIPWSHV 186          
BLAST of mRNA_P-wetherbeei_contig1.7.1 vs. uniprot
Match: A0A8F0FDI1_9PHAE (NADH dehydrogenase subunit 9 n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0FDI1_9PHAE)

HSP 1 Score: 238 bits (607), Expect = 9.230e-78
Identity = 105/159 (66.04%), Postives = 131/159 (82.39%), Query Frame = 1
Query:    4 EFSIKIHPSHLLATLLFLRDHSGTQYKILTAISGVDYPEQWQRFEVVYELLSIRYNHRIRVKCGVNELTPLPSSVEIYPSANWWEREIWDLYGVFFTNHPDMRRILTDYGFEGHPLRKDFPLSGYVELRYDDSQKRVVCEPIELAQEFRDYDTLSPWSK 480
            E  I +   +LLATL+FL  HS   Y++LT+ISGVDYPE+ +RFE+VY+LL++R N R+RVK   +E+ PLPS V ++PSANWWEREIWDL+GVFF++HPD+RRILTDYGFEGHPLRKDFPLSGY ELRYD+ Q+ VVCE IEL QEFR +D  +PWS+
Sbjct:   27 EIVISVSKKYLLATLIFLHHHSNGNYQLLTSISGVDYPEREERFEIVYDLLNLRSNSRLRVKTYTDEINPLPSVVSLFPSANWWEREIWDLFGVFFSDHPDLRRILTDYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCEAIELTQEFRSFDFHTPWSQ 185          
BLAST of mRNA_P-wetherbeei_contig1.7.1 vs. uniprot
Match: A0A0U1XC91_SCYLO (NADH dehydrogenase subunit 9 n=2 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A0U1XC91_SCYLO)

HSP 1 Score: 237 bits (605), Expect = 1.860e-77
Identity = 105/159 (66.04%), Postives = 130/159 (81.76%), Query Frame = 1
Query:    4 EFSIKIHPSHLLATLLFLRDHSGTQYKILTAISGVDYPEQWQRFEVVYELLSIRYNHRIRVKCGVNELTPLPSSVEIYPSANWWEREIWDLYGVFFTNHPDMRRILTDYGFEGHPLRKDFPLSGYVELRYDDSQKRVVCEPIELAQEFRDYDTLSPWSK 480
            E  I +  ++LL TL FL  HS   Y++LT+ISGVDYPE+ +RFE+VY+LL++R N RIR+K   +E+ PLPS V ++ SANWWEREIWDL+GVFF+NHPD+RRILTDYGFEGHPLRKDFPLSGY ELRYD+ Q+ VVCEPIEL+QEFR +D   PWS+
Sbjct:   27 EIVISVSKNYLLPTLTFLHHHSNGNYQMLTSISGVDYPEREERFEIVYDLLNVRSNSRIRIKTHTDEINPLPSVVSLFTSANWWEREIWDLFGVFFSNHPDLRRILTDYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCEPIELSQEFRSFDFHIPWSQ 185          
BLAST of mRNA_P-wetherbeei_contig1.7.1 vs. uniprot
Match: A0A7U0QGG2_9STRA (NADH dehydrogenase subunit 9 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7U0QGG2_9STRA)

HSP 1 Score: 238 bits (606), Expect = 2.090e-77
Identity = 102/160 (63.75%), Postives = 132/160 (82.50%), Query Frame = 1
Query:    1 SEFSIKIHPSHLLATLLFLRDHSGTQYKILTAISGVDYPEQWQRFEVVYELLSIRYNHRIRVKCGVNELTPLPSSVEIYPSANWWEREIWDLYGVFFTNHPDMRRILTDYGFEGHPLRKDFPLSGYVELRYDDSQKRVVCEPIELAQEFRDYDTLSPWSK 480
            +E    +HP ++   L FLRDH   QYK+L+AI+G DYPE+  RFE+ YELLSI++N R+RVK  +NE+  + S+ +I+ SANWWERE+WD++G+FF+NHPD+RRILTDYGFEG+PLRKDFPLSGYVE+RYDD+ KRVVCEP+ELAQEFR ++  SPWSK
Sbjct:   29 NEVICTVHPQYIPFVLTFLRDHVNCQYKVLSAITGTDYPERSDRFEISYELLSIKFNSRLRVKTSINEVGSVESATKIFNSANWWEREVWDMFGIFFSNHPDLRRILTDYGFEGYPLRKDFPLSGYVEVRYDDTVKRVVCEPLELAQEFRSFNFESPWSK 188          
BLAST of mRNA_P-wetherbeei_contig1.7.1 vs. uniprot
Match: A0A7S6UA16_9STRA (Nad9 n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6UA16_9STRA)

HSP 1 Score: 237 bits (604), Expect = 2.390e-77
Identity = 105/158 (66.46%), Postives = 130/158 (82.28%), Query Frame = 1
Query:    1 SEFSIKIHPSHLLATLLFLRDHSGTQYKILTAISGVDYPEQWQRFEVVYELLSIRYNHRIRVKCGVNELTPLPSSVEIYPSANWWEREIWDLYGVFFTNHPDMRRILTDYGFEGHPLRKDFPLSGYVELRYDDSQKRVVCEPIELAQEFRDYDTLSPW 474
            S+  + + PSHL+  L+FLRDH+  QYK+L+AISGVDYPE+  RFEV YELLS+  N R+R+K  VNE+T L S+VE+Y +ANWWERE+WDL+GVFF  HPD+RRILTDYGF GHPLRKDFPLSGYVELRYD++QKRVVCE +E +QEFR +   +PW
Sbjct:   27 SQVVLTVDPSHLIQVLVFLRDHTQCQYKVLSAISGVDYPERENRFEVSYELLSVSLNTRLRLKTYVNEVTALDSAVEVYSNANWWEREVWDLFGVFFRGHPDLRRILTDYGFVGHPLRKDFPLSGYVELRYDENQKRVVCESLEFSQEFRAFQFHTPW 184          
BLAST of mRNA_P-wetherbeei_contig1.7.1 vs. uniprot
Match: A0A8F0K105_9PHAE (NADH dehydrogenase subunit 9 n=1 Tax=Analipus japonicus TaxID=31333 RepID=A0A8F0K105_9PHAE)

HSP 1 Score: 237 bits (604), Expect = 2.470e-77
Identity = 105/157 (66.88%), Postives = 129/157 (82.17%), Query Frame = 1
Query:    4 EFSIKIHPSHLLATLLFLRDHSGTQYKILTAISGVDYPEQWQRFEVVYELLSIRYNHRIRVKCGVNELTPLPSSVEIYPSANWWEREIWDLYGVFFTNHPDMRRILTDYGFEGHPLRKDFPLSGYVELRYDDSQKRVVCEPIELAQEFRDYDTLSPW 474
            E  I +   +LL TL+FLR H+   +++LT ISGVDYPE+ +RFE+VY+LLSIR+N RIRVK   +E+ PLPS V ++PSANWWEREIWDL+GVFF+NHPD+RRILTDYGFEGHPLRKDFPLSGY ELRYD+ Q+ VVCE IEL+QEFR +   +PW
Sbjct:   27 EIVISVSKKYLLVTLMFLRHHTNGNFQLLTCISGVDYPERVERFEIVYDLLSIRWNSRIRVKTHTDEINPLPSIVGLFPSANWWEREIWDLFGVFFSNHPDLRRILTDYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCEAIELSQEFRSFTFHTPW 183          
BLAST of mRNA_P-wetherbeei_contig1.7.1 vs. uniprot
Match: D2Z200_9STRA (NADH dehydrogenase subunit 9 n=1 Tax=Chattonella marina TaxID=90936 RepID=D2Z200_9STRA)

HSP 1 Score: 236 bits (601), Expect = 6.620e-77
Identity = 103/159 (64.78%), Postives = 136/159 (85.53%), Query Frame = 1
Query:    1 SEFSIKIHPSHLLATLLFLRDHSGTQYKILTAISGVDYPEQWQRFEVVYELLSIRYNHRIRVKCGVNELTPLPSSVEIYPSANWWEREIWDLYGVFFTNHPDMRRILTDYGFEGHPLRKDFPLSGYVELRYDDSQKRVVCEPI-ELAQEFRDYDTLSPW 474
            +E  I +   +LL ++ FL+ H+ +QYKILT+ISGVDYP+  QRFE+VY+LL++ YN+R+RVK  V+E+TPLPS + ++P +NWWERE+WDL+GVFF NHPD+RRILTDYGFEGHPLRK+FPLSGYVE+RYD+SQKRVVCEPI +L+QEFR ++  +PW
Sbjct:   26 NEVIISVPSKYLLESIYFLKFHTQSQYKILTSISGVDYPQYQQRFEIVYDLLTLVYNNRLRVKTYVDEVTPLPSIISVFPCSNWWEREVWDLFGVFFLNHPDLRRILTDYGFEGHPLRKNFPLSGYVEVRYDESQKRVVCEPIKQLSQEFRSFNFPTPW 184          
BLAST of mRNA_P-wetherbeei_contig1.7.1 vs. uniprot
Match: A0A516ICK1_9PHAE (NADH dehydrogenase subunit 9 n=2 Tax=Lessoniaceae TaxID=35120 RepID=A0A516ICK1_9PHAE)

HSP 1 Score: 235 bits (600), Expect = 1.070e-76
Identity = 106/159 (66.67%), Postives = 129/159 (81.13%), Query Frame = 1
Query:    4 EFSIKIHPSHLLATLLFLRDHSGTQYKILTAISGVDYPEQWQRFEVVYELLSIRYNHRIRVKCGVNELTPLPSSVEIYPSANWWEREIWDLYGVFFTNHPDMRRILTDYGFEGHPLRKDFPLSGYVELRYDDSQKRVVCEPIELAQEFRDYDTLSPWSK 480
            E  I +   +LLATL FL  HS   +++LT+ISGVDYPE+ +RFE+VY+LL+IR N R+R+K   +E+ PLPS V ++PSANWWEREIWDL+GVFF NHPD+RRILTDYGFEGHPLRKDFPLSGY ELRYD+ QK VVCE IEL+QEFR +D   PWS+
Sbjct:   27 EIVISVSKKYLLATLTFLYHHSNGNFQMLTSISGVDYPERKERFEIVYDLLNIRSNCRLRIKTHTDEINPLPSIVSLFPSANWWEREIWDLFGVFFYNHPDLRRILTDYGFEGHPLRKDFPLSGYFELRYDEDQKVVVCEAIELSQEFRSFDFHVPWSQ 185          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2R4QQ80_9PHAE1.000e-7967.92NADH dehydrogenase subunit 9 n=3 Tax=Fucus TaxID=3... [more]
A0A0K2RWJ9_9STRA3.570e-7866.04NADH dehydrogenase subunit 9 n=1 Tax=Triparma laev... [more]
A0A0U1Z5T2_9PHAE3.810e-7866.88NADH dehydrogenase subunit 9 n=22 Tax=Sargassaceae... [more]
A0A8F0FDI1_9PHAE9.230e-7866.04NADH dehydrogenase subunit 9 n=1 Tax=Chorda asiati... [more]
A0A0U1XC91_SCYLO1.860e-7766.04NADH dehydrogenase subunit 9 n=2 Tax=Scytosiphonac... [more]
A0A7U0QGG2_9STRA2.090e-7763.75NADH dehydrogenase subunit 9 n=1 Tax=Pelagomonas c... [more]
A0A7S6UA16_9STRA2.390e-7766.46Nad9 n=1 Tax=Schizocladia ischiensis TaxID=196139 ... [more]
A0A8F0K105_9PHAE2.470e-7766.88NADH dehydrogenase subunit 9 n=1 Tax=Analipus japo... [more]
D2Z200_9STRA6.620e-7764.78NADH dehydrogenase subunit 9 n=1 Tax=Chattonella m... [more]
A0A516ICK1_9PHAE1.070e-7666.67NADH dehydrogenase subunit 9 n=2 Tax=Lessoniaceae ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1contigP-wetherbeei_contig1:15178..15663 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog9940.ENSOARP00000007638
Preferred nameNDUFS3
PFAMsComplex1_30kDa
Model size486
Max annot lvl33208|Metazoa
KEGG rclassRC00061
KEGG koko:K03936
KEGG TC3.D.1.6
KEGG ReactionR11945
KEGG Pathwayko00190,ko01100,ko04714,ko04723,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map04714,map04723,map04932,map05010,map05012,map05016
KEGG ModuleM00143
Hectar predicted targeting categoryother localisation
GOsGO:0001558,GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005746,GO:0005747,GO:0005759,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007005,GO:0007275,GO:0007568,GO:0008137,GO:0008150,GO:0008152,GO:0008340,GO:0009055,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009966,GO:0009968,GO:0009987,GO:0010257,GO:0010259,GO:0010646,GO:0010648,GO:0010941,GO:0015980,GO:0016020,GO:0016043,GO:0016310,GO:0016491,GO:0016604,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0019866,GO:0022607,GO:0022900,GO:0022904,GO:0023051,GO:0023057,GO:0030308,GO:0030964,GO:0031090,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032501,GO:0032502,GO:0032981,GO:0032991,GO:0033108,GO:0034622,GO:0034641,GO:0040008,GO:0042773,GO:0042775,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043209,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044451,GO:0044455,GO:0044464,GO:0045271,GO:0045333,GO:0045926,GO:0046034,GO:0046483,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048856,GO:0050136,GO:0050789,GO:0050794,GO:0051128,GO:0055086,GO:0055114,GO:0060548,GO:0065003,GO:0065007,GO:0070013,GO:0070469,GO:0071704,GO:0071840,GO:0072521,GO:0072593,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1902531,GO:1902532,GO:1990204,GO:2001233,GO:2001234,GO:2001242,GO:2001243
Exons1
Evalue2.41e-75
EggNOG OGsCOG0852@1|root,KOG1713@2759|Eukaryota,38BAK@33154|Opisthokonta,3B9TX@33208|Metazoa,3CTAV@33213|Bilateria,489WC@7711|Chordata,497AE@7742|Vertebrata,3J6NZ@40674|Mammalia,4IZYF@91561|Cetartiodactyla
EC1.6.5.3,1.6.99.3
DescriptionNADH dehydrogenase ubiquinone iron-sulfur protein 3
Cds size486
COG categoryC
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185847.9849424-CDS-P-wetherbeei_contig1:15177..156631683185847.9849424-CDS-P-wetherbeei_contig1:15177..15663Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1 15178..15663 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1.7.1prot_P-wetherbeei_contig1.7.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1 15178..15663 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1.7.1

>prot_P-wetherbeei_contig1.7.1 ID=prot_P-wetherbeei_contig1.7.1|Name=mRNA_P-wetherbeei_contig1.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=162bp
SEFSIKIHPSHLLATLLFLRDHSGTQYKILTAISGVDYPEQWQRFEVVYE
LLSIRYNHRIRVKCGVNELTPLPSSVEIYPSANWWEREIWDLYGVFFTNH
PDMRRILTDYGFEGHPLRKDFPLSGYVELRYDDSQKRVVCEPIELAQEFR
DYDTLSPWSKI*
back to top

mRNA from alignment at P-wetherbeei_contig1:15178..15663+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1.7.1 ID=mRNA_P-wetherbeei_contig1.7.1|Name=mRNA_P-wetherbeei_contig1.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=486bp|location=Sequence derived from alignment at P-wetherbeei_contig1:15178..15663+ (Phaeothamnion wetherbeei SAG_119_79)
TCAGAATTTTCTATTAAAATACACCCTTCACATCTTTTAGCAACATTGTT ATTTTTAAGAGATCATTCAGGAACACAATACAAAATACTGACTGCTATTT CCGGAGTCGATTATCCTGAACAATGGCAACGTTTTGAAGTAGTATACGAA CTTTTAAGCATCCGATATAATCATCGTATACGTGTTAAATGTGGTGTTAA CGAACTTACACCATTGCCGTCTTCAGTAGAAATATATCCAAGTGCTAACT GGTGGGAGCGTGAAATTTGGGATTTATACGGAGTATTTTTTACAAATCAT CCTGATATGCGGCGTATTTTGACCGATTATGGGTTTGAAGGGCATCCTTT AAGAAAAGATTTTCCTCTTTCCGGTTATGTAGAGCTCCGTTATGATGATA GTCAAAAACGTGTAGTGTGTGAGCCAATTGAGCTTGCACAAGAATTTCGG GATTATGATACTTTAAGTCCTTGGTCAAAAATATAA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig1:15178..15663+

>mRNA_P-wetherbeei_contig1.7.1 ID=mRNA_P-wetherbeei_contig1.7.1|Name=mRNA_P-wetherbeei_contig1.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=486bp|location=Sequence derived from alignment at P-wetherbeei_contig1:15178..15663+ (Phaeothamnion wetherbeei SAG_119_79)
TCAGAATTTTCTATTAAAATACACCCTTCACATCTTTTAGCAACATTGTT
ATTTTTAAGAGATCATTCAGGAACACAATACAAAATACTGACTGCTATTT
CCGGAGTCGATTATCCTGAACAATGGCAACGTTTTGAAGTAGTATACGAA
CTTTTAAGCATCCGATATAATCATCGTATACGTGTTAAATGTGGTGTTAA
CGAACTTACACCATTGCCGTCTTCAGTAGAAATATATCCAAGTGCTAACT
GGTGGGAGCGTGAAATTTGGGATTTATACGGAGTATTTTTTACAAATCAT
CCTGATATGCGGCGTATTTTGACCGATTATGGGTTTGAAGGGCATCCTTT
AAGAAAAGATTTTCCTCTTTCCGGTTATGTAGAGCTCCGTTATGATGATA
GTCAAAAACGTGTAGTGTGTGAGCCAATTGAGCTTGCACAAGAATTTCGG
GATTATGATACTTTAAGTCCTTGGTCAAAAATATAA
back to top