prot_P-wetherbeei_contig1783.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1783.3.1
Unique Nameprot_P-wetherbeei_contig1783.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length77
Homology
BLAST of mRNA_P-wetherbeei_contig1783.3.1 vs. uniprot
Match: A0A836CIE5_9STRA (Actin-related protein 2/3 complex subunit 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIE5_9STRA)

HSP 1 Score: 132 bits (332), Expect = 1.040e-37
Identity = 62/76 (81.58%), Postives = 69/76 (90.79%), Query Frame = 0
Query:    1 MQRSEHFIIMRRKPVEGYDISFLVTHTHLEKMWKHKLLDFVMQFMEEIDKEISGMKIAINARARIVASEFVRQFFP 76
            MQRSE FI+MRRK   GYDISFL+TH HLE MWKHKL+DFV++FME+IDKEISGMKIAINARARIVASE+VRQF P
Sbjct:   95 MQRSEQFIVMRRKAAPGYDISFLITHAHLEGMWKHKLVDFVIEFMEDIDKEISGMKIAINARARIVASEYVRQFCP 170          
BLAST of mRNA_P-wetherbeei_contig1783.3.1 vs. uniprot
Match: D7FKQ4_ECTSI (Actin-related protein 2/3 complex subunit 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKQ4_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 3.420e-36
Identity = 56/74 (75.68%), Postives = 69/74 (93.24%), Query Frame = 0
Query:    1 MQRSEHFIIMRRKPVEGYDISFLVTHTHLEKMWKHKLLDFVMQFMEEIDKEISGMKIAINARARIVASEFVRQF 74
            MQR+E F++MRRKP EG+DISFLVTH+HLEK+WKHKL+DF++QFME+IDKEISGMKIAINAR RI+A +F+ QF
Sbjct:   95 MQRAEQFVVMRRKPAEGFDISFLVTHSHLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQF 168          
BLAST of mRNA_P-wetherbeei_contig1783.3.1 vs. uniprot
Match: A0A2R5GGD7_9STRA (Actin-related protein 2/3 complex subunit 4 (Fragment) n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GGD7_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.120e-35
Identity = 55/74 (74.32%), Postives = 69/74 (93.24%), Query Frame = 0
Query:    1 MQRSEHFIIMRRKPVEGYDISFLVTHTHLEKMWKHKLLDFVMQFMEEIDKEISGMKIAINARARIVASEFVRQF 74
            MQR+E F+I+RRKP+EGYD+SFL+TH HLE +WKHKL+DFV+QFMEEID+EI+GMKIA+N RARIV+ EF+RQF
Sbjct:   53 MQRAEQFVILRRKPLEGYDLSFLITHKHLEILWKHKLVDFVIQFMEEIDREINGMKIAVNTRARIVSHEFMRQF 126          
BLAST of mRNA_P-wetherbeei_contig1783.3.1 vs. uniprot
Match: F0WR02_9STRA (Actin-related protein 2/3 complex subunit 4 n=3 Tax=Oomycota TaxID=4762 RepID=F0WR02_9STRA)

HSP 1 Score: 121 bits (304), Expect = 2.710e-33
Identity = 55/74 (74.32%), Postives = 68/74 (91.89%), Query Frame = 0
Query:    1 MQRSEHFIIMRRKPVEGYDISFLVTHTHLEKMWKHKLLDFVMQFMEEIDKEISGMKIAINARARIVASEFVRQF 74
            MQRSE FIIMRR PVEGY ISFL+THTHLE ++KHKL+DF++QFM++IDKEIS MKI++NAR RIVA+EF++QF
Sbjct:  109 MQRSEQFIIMRRVPVEGYQISFLITHTHLENLYKHKLIDFIIQFMQDIDKEISEMKISLNARGRIVATEFMKQF 182          
BLAST of mRNA_P-wetherbeei_contig1783.3.1 vs. uniprot
Match: A0A067C4Y9_SAPPC (Actin-related protein 2/3 complex subunit 4 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C4Y9_SAPPC)

HSP 1 Score: 120 bits (301), Expect = 5.090e-33
Identity = 52/74 (70.27%), Postives = 69/74 (93.24%), Query Frame = 0
Query:    1 MQRSEHFIIMRRKPVEGYDISFLVTHTHLEKMWKHKLLDFVMQFMEEIDKEISGMKIAINARARIVASEFVRQF 74
            MQR+E FII+RRKP+EGYD+SFL+TH+HLE ++KHKL+DF++QFME+IDKEIS MKI +NAR R+VA+EF++QF
Sbjct:   95 MQRAEQFIILRRKPIEGYDMSFLITHSHLENLYKHKLVDFIIQFMEDIDKEISEMKINLNARGRVVATEFMKQF 168          
BLAST of mRNA_P-wetherbeei_contig1783.3.1 vs. uniprot
Match: F0Y687_AURAN (Actin-related protein 2/3 complex subunit 4 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y687_AURAN)

HSP 1 Score: 120 bits (301), Expect = 5.230e-33
Identity = 54/74 (72.97%), Postives = 66/74 (89.19%), Query Frame = 0
Query:    1 MQRSEHFIIMRRKPVEGYDISFLVTHTHLEKMWKHKLLDFVMQFMEEIDKEISGMKIAINARARIVASEFVRQF 74
            MQRSE F+IMRRKP EGY ISFL+THTHLEKMWK KL+DF++ FME+I+KEIS M+IA+N+RARIVA EF++ F
Sbjct:   95 MQRSEQFVIMRRKPAEGYSISFLITHTHLEKMWKGKLVDFIITFMEDINKEISAMRIALNSRARIVAEEFLKDF 168          
BLAST of mRNA_P-wetherbeei_contig1783.3.1 vs. uniprot
Match: A0A2D4BNX3_PYTIN (Actin-related protein 2/3 complex subunit 4 n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BNX3_PYTIN)

HSP 1 Score: 120 bits (300), Expect = 7.220e-33
Identity = 54/74 (72.97%), Postives = 68/74 (91.89%), Query Frame = 0
Query:    1 MQRSEHFIIMRRKPVEGYDISFLVTHTHLEKMWKHKLLDFVMQFMEEIDKEISGMKIAINARARIVASEFVRQF 74
            MQR+E FIIMRR PVEGY +SFL+THTHLE ++KHKL+DF++QFME+IDKEIS MKI++NAR RIVA+EF++QF
Sbjct:   95 MQRAEQFIIMRRVPVEGYHMSFLITHTHLESLYKHKLIDFIIQFMEDIDKEISEMKISLNARGRIVATEFMKQF 168          
BLAST of mRNA_P-wetherbeei_contig1783.3.1 vs. uniprot
Match: A0A7S2CG59_9STRA (Actin-related protein 2/3 complex subunit 4 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CG59_9STRA)

HSP 1 Score: 119 bits (299), Expect = 1.050e-32
Identity = 56/74 (75.68%), Postives = 65/74 (87.84%), Query Frame = 0
Query:    1 MQRSEHFIIMRRKPVEGYDISFLVTHTHLEKMWKHKLLDFVMQFMEEIDKEISGMKIAINARARIVASEFVRQF 74
            MQR++ FIIMRRK  EGY ISFLVTH HLEKMWK KL+DFV+QFME+IDKEIS MK+A+N+RAR VA EFVR+F
Sbjct:   95 MQRADQFIIMRRKAKEGYSISFLVTHAHLEKMWKDKLIDFVIQFMEDIDKEISAMKLAVNSRARNVAQEFVREF 168          
BLAST of mRNA_P-wetherbeei_contig1783.3.1 vs. uniprot
Match: A0A1X7VU68_AMPQE (Actin-related protein 2/3 complex subunit 4 n=2 Tax=Heteroscleromorpha TaxID=1779146 RepID=A0A1X7VU68_AMPQE)

HSP 1 Score: 119 bits (297), Expect = 2.000e-32
Identity = 53/74 (71.62%), Postives = 67/74 (90.54%), Query Frame = 0
Query:    1 MQRSEHFIIMRRKPVEGYDISFLVTHTHLEKMWKHKLLDFVMQFMEEIDKEISGMKIAINARARIVASEFVRQF 74
            M R+EHF ++RRKP+EGYDISFL+T+ H E+M+KHKL+DFV+QFMEEIDKEIS MKI++NARARIVA EF++ F
Sbjct:   95 MMRAEHFFVLRRKPIEGYDISFLITNFHTEQMYKHKLVDFVIQFMEEIDKEISEMKISLNARARIVAEEFLKNF 168          
BLAST of mRNA_P-wetherbeei_contig1783.3.1 vs. uniprot
Match: A0A024TP77_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TP77_9STRA)

HSP 1 Score: 120 bits (300), Expect = 2.760e-32
Identity = 53/74 (71.62%), Postives = 67/74 (90.54%), Query Frame = 0
Query:    1 MQRSEHFIIMRRKPVEGYDISFLVTHTHLEKMWKHKLLDFVMQFMEEIDKEISGMKIAINARARIVASEFVRQF 74
            MQR+E FIIMRRKP+EGY ISFL+ HTHLE ++KHKL+DF++QFME+IDKEIS MKI +NAR R+VA+EF++QF
Sbjct:  144 MQRAEQFIIMRRKPIEGYSISFLIVHTHLENLYKHKLVDFIIQFMEDIDKEISEMKINLNARGRVVATEFMKQF 217          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1783.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CIE5_9STRA1.040e-3781.58Actin-related protein 2/3 complex subunit 4 n=1 Ta... [more]
D7FKQ4_ECTSI3.420e-3675.68Actin-related protein 2/3 complex subunit 4 n=1 Ta... [more]
A0A2R5GGD7_9STRA1.120e-3574.32Actin-related protein 2/3 complex subunit 4 (Fragm... [more]
F0WR02_9STRA2.710e-3374.32Actin-related protein 2/3 complex subunit 4 n=3 Ta... [more]
A0A067C4Y9_SAPPC5.090e-3370.27Actin-related protein 2/3 complex subunit 4 n=4 Ta... [more]
F0Y687_AURAN5.230e-3372.97Actin-related protein 2/3 complex subunit 4 n=1 Ta... [more]
A0A2D4BNX3_PYTIN7.220e-3372.97Actin-related protein 2/3 complex subunit 4 n=2 Ta... [more]
A0A7S2CG59_9STRA1.050e-3275.68Actin-related protein 2/3 complex subunit 4 n=1 Ta... [more]
A0A1X7VU68_AMPQE2.000e-3271.62Actin-related protein 2/3 complex subunit 4 n=2 Ta... [more]
A0A024TP77_9STRA2.760e-3271.62Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008384Actin-related protein 2/3 complex subunit 4PFAMPF05856ARPC4coord: 1..72
e-value: 1.3E-31
score: 109.5
IPR008384Actin-related protein 2/3 complex subunit 4PANTHERPTHR22629ARP2/3 COMPLEX 20 KD SUBUNITcoord: 1..74
IPR034666Arp2/3 complex subunit 2/4GENE3D3.30.1460.20coord: 1..74
e-value: 1.0E-31
score: 111.6
IPR034666Arp2/3 complex subunit 2/4SUPERFAMILY69645Arp2/3 complex subunitscoord: 1..74
NoneNo IPR availablePANTHERPTHR22629:SF1ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 4coord: 1..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1783contigP-wetherbeei_contig1783:5432..6174 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1783.3.1mRNA_P-wetherbeei_contig1783.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1783 4536..6378 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1783.3.1 ID=prot_P-wetherbeei_contig1783.3.1|Name=mRNA_P-wetherbeei_contig1783.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=77bp
MQRSEHFIIMRRKPVEGYDISFLVTHTHLEKMWKHKLLDFVMQFMEEIDK
EISGMKIAINARARIVASEFVRQFFP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008384ARPC4
IPR034666ARPC2/4