mRNA_P-wetherbeei_contig1783.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1783.2.1 vs. uniprot
Match: A0A835YRP6_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRP6_9STRA) HSP 1 Score: 375 bits (964), Expect = 4.000e-126 Identity = 199/279 (71.33%), Postives = 217/279 (77.78%), Query Frame = 3
Query: 270 GLTNPLP*EIRISCFGIHMHPRLSFSSIPVCHPYCSRVNPLRDTLLSPATIVVIPTPVRPAEPSADGLVTGARIGPPPDLPSLLLHNRIVYLGMPLVPAVTELIIAELLYLNYESGSKPIYMYINTPGTSTPDGRSIGFETEAFAIADCIKYVKPPVYTIAVGQAFGTGAMLLASGDKGNRCALPNASIMLHQPRSQARGQASDIAIKAREVMQNRKTTVSMLAQACGKAYDEVEKDASRTFYMTPDEAVTYGLIDKVLTNTKKDNTPRPKFLDSISMS 1106
T PLP G R+S S P + P+ L A P + S + GARIGPPPDLPSLLLHNRIVYLGMPLVPAVTELIIAELLYLNYES +KPIYMYINTPGTSTPDGRS+GFETEAFAIADC+KYV+PPVYTIAVGQAFGTGAMLL+ G KGNR ALPNASIMLHQPRSQARGQASDIAIKAREVM NRK T +ML+QACGK Y+ VEKDASRTFYM+PDEAVTYGLIDKVLTN+KKDN P+PKFLDSI ++
Sbjct: 18 AFTAPLP-----RARGAVSSSRISMQSSPDFSLPFDPLGPVDQHLPLVAQAAASPQMISGGASSGERRYDGARIGPPPDLPSLLLHNRIVYLGMPLVPAVTELIIAELLYLNYESSTKPIYMYINTPGTSTPDGRSVGFETEAFAIADCMKYVRPPVYTIAVGQAFGTGAMLLSQGQKGNRAALPNASIMLHQPRSQARGQASDIAIKAREVMANRKITCTMLSQACGKPYEAVEKDASRTFYMSPDEAVTYGLIDKVLTNSKKDNAPKPKFLDSIGLA 291
BLAST of mRNA_P-wetherbeei_contig1783.2.1 vs. uniprot
Match: D7G416_ECTSI (ATP-dependent Clp protease proteolytic subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G416_ECTSI) HSP 1 Score: 347 bits (891), Expect = 1.350e-114 Identity = 170/208 (81.73%), Postives = 190/208 (91.35%), Query Frame = 3
Query: 480 GARIGPPPDLPSLLLHNRIVYLGMPLVPAVTELIIAELLYLNYESGSKPIYMYINTPGTSTPDGRSIGFETEAFAIADCIKYVKPPVYTIAVGQAFGTGAMLLASGDKGNRCALPNASIMLHQPRSQARGQASDIAIKAREVMQNRKTTVSMLAQACGKAYDEVEKDASRTFYMTPDEAVTYGLIDKVLTNTKKDNTPRPKFLDSISM 1103
GAR+GPPPDLPSLLLHNRIVYLGMPLVPAVTELIIAELLYLNYES SKP+YMYINTPGTSTPDGR+IGFETEAFAI+DC+ Y+KPPVYTI VGQAFG GAMLLASG+KG+R ALPNASIMLHQPRS ARGQASDIAIKA+EVM NRKT ML++ACGK YDEV +D+SRTFYM+PD+AV YGLIDKVL ++KKD+ P FLD++SM
Sbjct: 104 GARVGPPPDLPSLLLHNRIVYLGMPLVPAVTELIIAELLYLNYESASKPVYMYINTPGTSTPDGRAIGFETEAFAISDCMNYIKPPVYTIGVGQAFGLGAMLLASGEKGHRSALPNASIMLHQPRSMARGQASDIAIKAKEVMANRKTATQMLSEACGKPYDEVLEDSSRTFYMSPDDAVEYGLIDKVLRSSKKDDVVAPAFLDALSM 311
BLAST of mRNA_P-wetherbeei_contig1783.2.1 vs. uniprot
Match: A0A7S2W9Z3_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W9Z3_9STRA) HSP 1 Score: 298 bits (763), Expect = 3.710e-96 Identity = 145/206 (70.39%), Postives = 174/206 (84.47%), Query Frame = 3
Query: 480 GARIGPPPDLPSLLLHNRIVYLGMPLVPAVTELIIAELLYLNYESGSKPIYMYINTPGTSTPDGRSIGFETEAFAIADCIKYVKPPVYTIAVGQAFGTGAMLLASGDKGNRCALPNASIMLHQPRSQARGQASDIAIKAREVMQNRKTTVSMLAQACGKAYDEVEKDASRTFYMTPDEAVTYGLIDKVLTNTKKDNTPRPKFLDSI 1097
GARI PPPDLPSLLLHNRIVY+GMPLVPAVTELIIAELLYLNYES +KP+YMYIN+PGT++ DGR++GFETEAFAIADC+KY+KPPV+TI +GQA+G AMLL+ G G R LPN+SIMLHQPRS ARGQASDIAIKAREV+ NRK T S++A+ACGK D V DASRT Y +P+EAV YG+IDKV++ ++ P F++S+
Sbjct: 57 GARISPPPDLPSLLLHNRIVYIGMPLVPAVTELIIAELLYLNYESATKPVYMYINSPGTTSADGRAVGFETEAFAIADCMKYIKPPVHTICIGQAYGAAAMLLSQGALGKRSCLPNSSIMLHQPRSMARGQASDIAIKAREVLNNRKVTCSLIARACGKDLDTVMNDASRTRYFSPEEAVEYGIIDKVMSPKAQNLPVTPSFMNSL 262
BLAST of mRNA_P-wetherbeei_contig1783.2.1 vs. uniprot
Match: F0Y0T1_AURAN (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y0T1_AURAN) HSP 1 Score: 296 bits (758), Expect = 5.230e-96 Identity = 149/209 (71.29%), Postives = 172/209 (82.30%), Query Frame = 3
Query: 480 GARIGPPPDLPSLLLHNRIVYLGMPLVPAVTELIIAELLYLNYESGSKPIYMYINTPGTSTPDGRSIGFETEAFAIADCIKYVKPPVYTIAVGQAFGTGAMLLASGDKGNRCALPNASIMLHQPRSQARGQASDIAIKAREVMQNRKTTVSMLAQACGKAYDEVEKDASRTFYMTPDEAVTYGLIDKVLTNTKKDNTP---RPKFLDSI 1097
G RIGPPPDL SLLLHNRIVYLGMP+V AVTELI+AELLYLNYES +KP+ +YIN+PGT G+S+GFETEAFAIADC+KY+KPPV TI VGQAFG AMLLA G+KG R LPNASIMLHQPRSQARGQASDIAI+AREVM NRK + ++A+ACG++ DEV DASRT Y+ PDEAV YGLIDKVL N KD +P F+D++
Sbjct: 13 GVRIGPPPDLASLLLHNRIVYLGMPMVSAVTELIVAELLYLNYESPTKPVTLYINSPGTVNSQGQSVGFETEAFAIADCMKYIKPPVQTICVGQAFGAAAMLLAQGEKGKRFCLPNASIMLHQPRSQARGQASDIAIRAREVMSNRKVSCELMARACGRSVDEVMADASRTKYLQPDEAVEYGLIDKVLHNVGKDAAAAVAKPSFMDAL 221
BLAST of mRNA_P-wetherbeei_contig1783.2.1 vs. uniprot
Match: A0A8J2SEL5_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SEL5_9STRA) HSP 1 Score: 295 bits (756), Expect = 6.990e-95 Identity = 148/208 (71.15%), Postives = 172/208 (82.69%), Query Frame = 3
Query: 480 GARIGPPPDLPSLLLHNRIVYLGMPLVPAVTELIIAELLYLNYESGSKPIYMYINTPGTSTPDGRSIGFETEAFAIADCIKYVKPPVYTIAVGQAFGTGAMLLASGDKGNRCALPNASIMLHQPRSQARGQASDIAIKAREVMQNRKTTVSMLAQACGKAYDEVEKDASRTFYMTPDEAVTYGLIDKVLTNTKK--DNTPRPKFLDSI 1097
G RIGPPPDL SLLLHNRIVYLGMP+V AVTELI+AELLYLNYES SKP+ +YIN+PGT G+++GFETEAFAIADC+KY+KPPV TI VGQAFG AMLLA G+KG R LPNASIMLHQPRSQARGQASDIAI+A+EVM NRK + +LA+ACG+ DEV +DASRT Y+ PDEAV YGL+DKVL N K D +P F+D++
Sbjct: 70 GVRIGPPPDLASLLLHNRIVYLGMPMVSAVTELIVAELLYLNYESPSKPVTLYINSPGTVNAQGQAVGFETEAFAIADCMKYIKPPVQTICVGQAFGAAAMLLAQGEKGKRFCLPNASIMLHQPRSQARGQASDIAIRAKEVMANRKVSCELLARACGRPVDEVMRDASRTKYLQPDEAVEYGLVDKVLHNVGKAADAPKKPSFMDAL 277
BLAST of mRNA_P-wetherbeei_contig1783.2.1 vs. uniprot
Match: A0A7S3JWT2_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JWT2_9STRA) HSP 1 Score: 292 bits (747), Expect = 2.080e-93 Identity = 145/207 (70.05%), Postives = 174/207 (84.06%), Query Frame = 3
Query: 480 GARIGPPPDLPSLLLHNRIVYLGMPLVPAVTELIIAELLYLNYESGSKPIYMYINTPGTSTPDGRSIGFETEAFAIADCIKYVKPPVYTIAVGQAFGTGAMLLASGDKGNRCALPNASIMLHQPRSQARGQASDIAIKAREVMQNRKTTVSMLAQACGKAYDEVEKDASRTFYMTPDEAVTYGLIDKVLTNTKKDNTPR-PKFLDSI 1097
G RIGPPPDL SLLLHNRIVYLGMP+VPAVTELI+AELLYLNYES +KP+ +YIN+PGT + DGRS+GFETEAFAIAD +KY+KPPV+TI VGQAFG AMLL+ G KG R LPNASIMLHQPRS ARGQASD+AIKAREVM NRK +LA+ACGK+ +EV +DA RT Y+TP++AV YGLID+VL T +++ + P F+D++
Sbjct: 79 GVRIGPPPDLASLLLHNRIVYLGMPMVPAVTELIVAELLYLNYESATKPVTLYINSPGTVSADGRSVGFETEAFAIADTMKYIKPPVHTICVGQAFGAAAMLLSQGAKGFRACLPNASIMLHQPRSMARGQASDVAIKAREVMVNRKIQCELLARACGKSVEEVLQDAQRTKYLTPEQAVQYGLIDRVLHTTARESVEQQPSFMDAL 285
BLAST of mRNA_P-wetherbeei_contig1783.2.1 vs. uniprot
Match: A0A7S1TPJ3_9RHOD (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TPJ3_9RHOD) HSP 1 Score: 289 bits (740), Expect = 1.210e-92 Identity = 142/206 (68.93%), Postives = 169/206 (82.04%), Query Frame = 3
Query: 480 GARIGPPPDLPSLLLHNRIVYLGMPLVPAVTELIIAELLYLNYESGSKPIYMYINTPGTSTPDGRSIGFETEAFAIADCIKYVKPPVYTIAVGQAFGTGAMLLASGDKGNRCALPNASIMLHQPRSQARGQASDIAIKAREVMQNRKTTVSMLAQACGKAYDEVEKDASRTFYMTPDEAVTYGLIDKVLTNTKKDNTPRPKFLDSI 1097
GAR+GPPPDLPSLLLHNRIVY+GMPLVPAVTELIIAELLYL Y KPIYMY+N+ GT+ PDG S GFETEAFAIAD + Y+KPPV+TI +GQAFGT AMLLASG+KGNR ALPNA++M+HQPRS ARGQA DIAIKAREV+ NR+ T+ ++A+ CGK D V DA+RT Y++ EAV YG+IDKVL + K +P P FL ++
Sbjct: 59 GARLGPPPDLPSLLLHNRIVYIGMPLVPAVTELIIAELLYLQYNDADKPIYMYLNSTGTTNPDGSSAGFETEAFAIADTMNYIKPPVHTICIGQAFGTAAMLLASGEKGNRAALPNATVMIHQPRSSARGQAEDIAIKAREVLLNRRVTMEIIAERCGKDLDIVMHDAARTRYLSAAEAVNYGVIDKVLESPKDLPSPAPTFLSAL 264
BLAST of mRNA_P-wetherbeei_contig1783.2.1 vs. uniprot
Match: M2Y7R9_GALSU (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y7R9_GALSU) HSP 1 Score: 288 bits (737), Expect = 4.780e-92 Identity = 135/207 (65.22%), Postives = 175/207 (84.54%), Query Frame = 3
Query: 480 GARIGPPPDLPSLLLHNRIVYLGMPLVPAVTELIIAELLYLNYESGSKPIYMYINTPGTSTPDGRSIGFETEAFAIADCIKYVKPPVYTIAVGQAFGTGAMLLASGDKGNRCALPNASIMLHQPRSQARGQASDIAIKAREVMQNRKTTVSMLAQACGKAYDEVEKDASRTFYMTPDEAVTYGLIDKVLTNTKKDNTPRPKFLDSIS 1100
GAR+GPPPDLPSLLLHNRI+YLGMPL+PAVTELIIAE LYL YESG KPIY+YIN+ GTS PDG + GFETEAFA+ D ++YVKPPV+TI VGQA+GT A+LLA+G+KG R ALP+A++MLHQPRS +G ASDIAIKAREV+ NRK T +L+++ G+ +++++KD+ RT YMTP+EA YG+IDK+LT+TK+ +P F+ +++
Sbjct: 69 GARLGPPPDLPSLLLHNRIIYLGMPLLPAVTELIIAEFLYLQYESGEKPIYLYINSTGTSNPDGSTAGFETEAFAVCDTMRYVKPPVHTICVGQAYGTAALLLAAGEKGFRAALPHATVMLHQPRSSTQGPASDIAIKAREVLYNRKVTFELLSESTGQPFEKIQKDSQRTKYMTPEEAKEYGIIDKILTSTKEPFVEKPSFIHALN 275
BLAST of mRNA_P-wetherbeei_contig1783.2.1 vs. uniprot
Match: A0A7S0ZCQ2_9RHOD (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZCQ2_9RHOD) HSP 1 Score: 284 bits (726), Expect = 1.150e-90 Identity = 138/206 (66.99%), Postives = 169/206 (82.04%), Query Frame = 3
Query: 480 GARIGPPPDLPSLLLHNRIVYLGMPLVPAVTELIIAELLYLNYESGSKPIYMYINTPGTSTPDGRSIGFETEAFAIADCIKYVKPPVYTIAVGQAFGTGAMLLASGDKGNRCALPNASIMLHQPRSQARGQASDIAIKAREVMQNRKTTVSMLAQACGKAYDEVEKDASRTFYMTPDEAVTYGLIDKVLTNTKKDNTPRPKFLDSI 1097
GARIGPPPDLPSLLLHNRIVY+GMPLVPAVTELIIAELLYL Y KPI+MY+N+ GT+ PDG S GFETEAFA+ D + Y+KPPV+TI +GQAFGT AMLLA G+KG+R ALPNA++M+HQPRS ARGQA+DIAIKA+EV+ NR+ T+ ++A+ACGK D V DA+RT Y++ +AV YGLIDKVL + K +P P FL ++
Sbjct: 51 GARIGPPPDLPSLLLHNRIVYIGMPLVPAVTELIIAELLYLQYNDTDKPIFMYVNSTGTTNPDGSSAGFETEAFAVVDTMNYIKPPVHTICIGQAFGTAAMLLAGGEKGHRAALPNATVMIHQPRSTARGQAADIAIKAKEVLLNRRVTMEIIAEACGKDLDTVMADAARTRYLSAADAVEYGLIDKVLESPKDLPSPAPTFLSAL 256
BLAST of mRNA_P-wetherbeei_contig1783.2.1 vs. uniprot
Match: A0A5J4YKY4_PORPP (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YKY4_PORPP) HSP 1 Score: 283 bits (725), Expect = 2.000e-90 Identity = 142/206 (68.93%), Postives = 167/206 (81.07%), Query Frame = 3
Query: 480 GARIGPPPDLPSLLLHNRIVYLGMPLVPAVTELIIAELLYLNYESGSKPIYMYINTPGTSTPDGRSIGFETEAFAIADCIKYVKPPVYTIAVGQAFGTGAMLLASGDKGNRCALPNASIMLHQPRSQARGQASDIAIKAREVMQNRKTTVSMLAQACGKAYDEVEKDASRTFYMTPDEAVTYGLIDKVLTNTKKDNTPRPKFLDSI 1097
GARIGPPPDLPSLLLHNRIVY+GMPLVPAVTELIIAELLYL Y SKPI+MYIN+ GT+ PDG GFETEAFAIAD + Y+ PPV+TI +GQAFG AMLLA+GDKGNR ALPNA++ML QPRSQARGQA+DIAIKA+EV+ NRK T+ ++A+ CGK + V DA+RT Y+ P A YGLIDKVL +TK TP P F+ ++
Sbjct: 54 GARIGPPPDLPSLLLHNRIVYIGMPLVPAVTELIIAELLYLQYNDASKPIFMYINSTGTTNPDGSPAGFETEAFAIADTMNYITPPVHTICLGQAFGAAAMLLANGDKGNRAALPNATVMLLQPRSQARGQAADIAIKAKEVLLNRKVTLQIIAECCGKDIEIVAADAARTKYLDPVAAKEYGLIDKVLQSTKDLPTPTPSFMSAM 259 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1783.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1783.2.1 >prot_P-wetherbeei_contig1783.2.1 ID=prot_P-wetherbeei_contig1783.2.1|Name=mRNA_P-wetherbeei_contig1783.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=262bp MHPRLSFSSIPVCHPYCSRVNPLRDTLLSPATIVVIPTPVRPAEPSADGLback to top mRNA from alignment at P-wetherbeei_contig1783:1762..3830- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1783.2.1 ID=mRNA_P-wetherbeei_contig1783.2.1|Name=mRNA_P-wetherbeei_contig1783.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2069bp|location=Sequence derived from alignment at P-wetherbeei_contig1783:1762..3830- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1783:1762..3830- >mRNA_P-wetherbeei_contig1783.2.1 ID=mRNA_P-wetherbeei_contig1783.2.1|Name=mRNA_P-wetherbeei_contig1783.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=786bp|location=Sequence derived from alignment at P-wetherbeei_contig1783:1762..3830- (Phaeothamnion wetherbeei SAG_119_79)back to top |