mRNA_P-wetherbeei_contig17815.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17815.1.1
Unique NamemRNA_P-wetherbeei_contig17815.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig17815.1.1 vs. uniprot
Match: A0A3D5DHF3_9GAMM (Aldehyde ferredoxin oxidoreductase (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DHF3_9GAMM)

HSP 1 Score: 85.1 bits (209), Expect = 3.290e-19
Identity = 35/45 (77.78%), Postives = 42/45 (93.33%), Query Frame = 1 
Query:    1 MESRLLRVNLTTGELTSEVIPHQMFERWIGGSGINNWIMWEHFLT 135
            MES LLRVNLTTGE+ +E+I H++FERW+GGSG+NNWIMWEHFLT
Sbjct:    1 MESNLLRVNLTTGEIKNEIIGHEVFERWVGGSGVNNWIMWEHFLT 45
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BLAST of mRNA_P-wetherbeei_contig17815.1.1 vs. uniprot
Match: A0A1Z9UL52_9GAMM (AFOR_N domain-containing protein n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Z9UL52_9GAMM)

HSP 1 Score: 87.0 bits (214), Expect = 7.750e-19
Identity = 38/45 (84.44%), Postives = 43/45 (95.56%), Query Frame = 1 
Query:    1 MESRLLRVNLTTGELTSEVIPHQMFERWIGGSGINNWIMWEHFLT 135
            MESRLLRV+L+TG++ SEVIPH +FERWIGGSGINNWIMWEHFLT
Sbjct:    1 MESRLLRVDLSTGKMRSEVIPHSVFERWIGGSGINNWIMWEHFLT 45
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BLAST of mRNA_P-wetherbeei_contig17815.1.1 vs. uniprot
Match: A0A7Y4U720_9DELT (AFOR_N domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7Y4U720_9DELT)

HSP 1 Score: 77.0 bits (188), Expect = 2.570e-15
Identity = 28/43 (65.12%), Postives = 41/43 (95.35%), Query Frame = 1 
Query:    1 MESRLLRVNLTTGELTSEVIPHQMFERWIGGSGINNWIMWEHF 129
            M+++LLRVNLTTG++ +E++PH +FERW+GGSGIN+WI+W+HF
Sbjct:    1 MQAKLLRVNLTTGDIRTEILPHSLFERWVGGSGINDWILWDHF 43
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BLAST of mRNA_P-wetherbeei_contig17815.1.1 vs. uniprot
Match: A0A3A4NBR4_9BACT (AFOR_N domain-containing protein n=1 Tax=Candidatus Abyssubacteria bacterium SURF_5 TaxID=2093360 RepID=A0A3A4NBR4_9BACT)

HSP 1 Score: 50.1 bits (118), Expect = 8.180e-6
Identity = 19/40 (47.50%), Postives = 32/40 (80.00%), Query Frame = 1 
Query:   13 LLRVNLTTGELTSEVIPHQMFERWIGGSGINNWIMWEHFL 132
            +LRV+LT+G +  E IP  + ++++GG GIN++++WEHFL
Sbjct:   22 ILRVDLTSGRIKREPIPRGLIKKFVGGMGINDYLLWEHFL 61
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BLAST of mRNA_P-wetherbeei_contig17815.1.1 vs. uniprot
Match: A0A521UX80_9CHLR (AFOR_N domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A521UX80_9CHLR)

HSP 1 Score: 47.4 bits (111), Expect = 7.350e-5
Identity = 19/40 (47.50%), Postives = 30/40 (75.00%), Query Frame = 1 
Query:   13 LLRVNLTTGELTSEVIPHQMFERWIGGSGINNWIMWEHFL 132
            L+R++L+   +T E IP  +  R++GG GIN+W++WEHFL
Sbjct:    7 LVRIDLSGETVTVEQIPLALRRRYLGGEGINSWLLWEHFL 46
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17815.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A3D5DHF3_9GAMM3.290e-1977.78Aldehyde ferredoxin oxidoreductase (Fragment) n=1 ... [more]
A0A1Z9UL52_9GAMM7.750e-1984.44AFOR_N domain-containing protein n=2 Tax=Gammaprot... [more]
A0A7Y4U720_9DELT2.570e-1565.12AFOR_N domain-containing protein n=1 Tax=Deltaprot... [more]
A0A3A4NBR4_9BACT8.180e-647.50AFOR_N domain-containing protein n=1 Tax=Candidatu... [more]
A0A521UX80_9CHLR7.350e-547.50AFOR_N domain-containing protein n=1 Tax=Chlorofle... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17815contigP-wetherbeei_contig17815:6..140 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog186497.PF1203
PFAMsAFOR_C,AFOR_N
Model size135
Max annot lvl183968|Thermococci
KEGG rclassRC00242
KEGG koko:K03738
KEGG ReactionR08571
KEGG Pathwayko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200
KEGG ModuleM00309
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Evalue0.000109
EggNOG OGsCOG2414@1|root,arCOG00707@2157|Archaea,2Y3BC@28890|Euryarchaeota,243IP@183968|Thermococci
EC1.2.7.5
DescriptionAldehyde ferredoxin oxidoreductase, N-terminal domain
Cds size135
COG categoryC
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186128.0376794-CDS-P-wetherbeei_contig17815:5..1401683186128.0376794-CDS-P-wetherbeei_contig17815:5..140Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17815 6..140 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17815.1.1prot_P-wetherbeei_contig17815.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17815 6..140 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17815.1.1

>prot_P-wetherbeei_contig17815.1.1 ID=prot_P-wetherbeei_contig17815.1.1|Name=mRNA_P-wetherbeei_contig17815.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=45bp
MESRLLRVNLTTGELTSEVIPHQMFERWIGGSGINNWIMWEHFLT
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mRNA from alignment at P-wetherbeei_contig17815:6..140-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17815.1.1 ID=mRNA_P-wetherbeei_contig17815.1.1|Name=mRNA_P-wetherbeei_contig17815.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=135bp|location=Sequence derived from alignment at P-wetherbeei_contig17815:6..140- (Phaeothamnion wetherbeei SAG_119_79)
ATGGAAAGCCGTTTACTGCGCGTCAATCTGACGACCGGCGAGCTCACGAG
TGAAGTCATACCGCACCAGATGTTTGAACGCTGGATAGGTGGTTCCGGCA
TCAACAACTGGATCATGTGGGAACACTTTCTGACC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17815:6..140-

>mRNA_P-wetherbeei_contig17815.1.1 ID=mRNA_P-wetherbeei_contig17815.1.1|Name=mRNA_P-wetherbeei_contig17815.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=135bp|location=Sequence derived from alignment at P-wetherbeei_contig17815:6..140- (Phaeothamnion wetherbeei SAG_119_79)
ATGGAAAGCCGTTTACTGCGCGTCAATCTGACGACCGGCGAGCTCACGAG
TGAAGTCATACCGCACCAGATGTTTGAACGCTGGATAGGTGGTTCCGGCA
TCAACAACTGGATCATGTGGGAACACTTTCTGACC
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