mRNA_P-wetherbeei_contig1777.6.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1777.6.2
Unique NamemRNA_P-wetherbeei_contig1777.6.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1777.6.2 vs. uniprot
Match: A0A6H5JUF7_9PHAE (GCFC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUF7_9PHAE)

HSP 1 Score: 182 bits (461), Expect = 3.280e-46
Identity = 166/509 (32.61%), Postives = 219/509 (43.03%), Query Frame = 1
Query:    1 CGMLREKEGMISEAAATTAALRRQRLAKTLRRRAEDQEDALLDC---AAAVESAGPYMAAADGPLXXXXXXXXXXXXVTTASRRSGPVLDEFGRDGGEQHERXXXXXXXXXXXXXXXXXXXXXRWAXXXXXXXXXXXXXXXXXXXXPSSAAPRWLRAGPRPAPAALWPAALATAACEAXXSGGEESDAEAEAEERRATMVADAAEVVLEDVDLEIKSLREIRAFFEHWKGAHPAQYAQAYCSTALPKLLEPLVRLEMVAWDPLN-----------------------AARRLGN-------------------------------------GGFQCFKWYRCFFDFAASDSSGDGAAAGRKDGSAITTASASDPDRNLVPTLLEHVALPSLCVCLAESYDAWSERETAAAVAAVEEVLVYXXXXXXXXXXXXXXXXXXXXAVRSLCVPGGSAFSAESGAAAAELFWR-QLWRAVKLLGNIALWQDLILPHTLAPIATGELLERRVAPAL 1335
            CGMLREKE M+SE  A    L  +RL + ++ R +DQED +LD     A V   GPY A   GPL             + A R  G  +      G +    XXXXXXXXXX           R                             W+ +   P     W     T   +A  S GEES+     EE R T V +AA++V+EDVD  +KS+  ++A FE+WK  H  QYAQAYC+  +P LL P VRLE+V W+PL                        AA  + N                                     G  + F+WYR  FDF+      D A  G  +          DPD+NLVP L+E VALP +   L+ +YDA S R+TA  V+AV E+L+Y                    AV+ +C+P   A S   G AAA    R Q  R +KLL N   W+DL+ P +L P+A G+L+ +R+ PAL
Sbjct:  413 CGMLREKESMLSEVEAAKRLLHARRLERVVQVRLQDQEDEILDARDAGATVSGLGPYRACPGGPL-------------SRAPRIGGASMGSSANGGEDDRSXXXXXXXXXXXRCSTGEGPGGVREGEG-------------------------WVGSKSFP-----WGKKERTEVWQALGSEGEESEXXXXREEERLTRVQEAADMVMEDVDDSVKSVSAVKALFENWKRQHGEQYAQAYCTLTIPDLLAPFVRLELVRWNPLTGKVGGVDGVGTRNSRDNRKGQKPAAVGVENDSEGPRNEEQKEEEDMKGLQPSAAGGDETDEGEDDLEGALERFEWYRRLFDFSEDIPPPDSAGYGADE----------DPDQNLVPQLVEKVALPLVAERLSTAYDAMSRRQTACLVSAVSEILIYDPTEESLKTLLGSAMRALQAAVQGVCIPLIGASSTPGGRAAAVRLVRIQASRGLKLLRNCLAWRDLLSPESLVPLALGDLVAKRLVPAL 868          
BLAST of mRNA_P-wetherbeei_contig1777.6.2 vs. uniprot
Match: A0A835YVY7_9STRA (GCFC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVY7_9STRA)

HSP 1 Score: 158 bits (400), Expect = 3.560e-38
Identity = 118/271 (43.54%), Postives = 146/271 (53.87%), Query Frame = 1
Query:  577 RATMVADAAEVVLEDVDLEIKSLREIRAFFEHWKGAHPAQYAQAYCSTALPKLLEPLVRLEMVAWDPLNAARRLGNGG------------FQCFKWYRCFFDFAASDSSGDGAAAGRKDGSAITTASASDPDRNLVPTLLEHVALPSLCVCLAESYDAWSERETAAAVAAVEEVLVYXXXXXXXXXXXXXXXXXXXXAVRSLCVPGGSAFSAESGAAAAELFWRQLWRAVKLLGNIALWQDLILPHTLAPIATGELLERRVAPALLRALHG 1353
            R   + DAA +VLEDVD +++SL  ++A FE WK  H   YA+AYC+ +LP LL PLVRLEM+ WDP++   R G+ G            F+ F W+RC FDFA           G    +A   A+  DPD +LVP LLE  A+P L   +  +YDA S   TA  VA        XXXXXXXXXXXXX     XX   +LCVP     +A  G  A  L  R+LW A +L  N A W  +     L PIA GE+  RR APAL R L G
Sbjct:  690 RVAALLDAAALVLEDVDEDVRSLPALKALFEGWKRDHGEHYARAYCALSLPPLLAPLVRLEMLRWDPVHGTVRGGDAGAAAAADEEVDTVFERFAWFRCLFDFAE----------GIATPAAAEYATDEDPDADLVPKLLEAAAVPQLAAAIESAYDAGSAAATAHLVAXXXXXXXXXXXXXXXXXXXXXPLPPLXXXXXALCVPVVGPLAARGGGVA--LAARRLWHAARLYHNAAAWDGVAAAAALVPIAIGEVAARRAAPALERLLRG 948          
BLAST of mRNA_P-wetherbeei_contig1777.6.2 vs. uniprot
Match: A0A4D9D9I3_9STRA (GCFC domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9I3_9STRA)

HSP 1 Score: 155 bits (393), Expect = 2.140e-37
Identity = 137/475 (28.84%), Postives = 194/475 (40.84%), Query Frame = 1
Query:    1 CGMLREKEGMISEAAATTAALRRQRLAKTLRRRAEDQEDALLDCAAAVESAGPYMAAADGPLXXXXXXXXXXXXVT---TASRRSGPV------LDEFGRDGGEQHERXXXXXXXXXXXXXXXXXXXXXRWAXXXXXXXXXXXXXXXXXXXXPSSAAPRWLRAGPRPAPAALWPAALATAACEAXXSGGEESDAEAEAEERRATMVADAAEVVLEDVDLEIKSLREIRAFFEHWKGAHPAQYAQAYCSTALPKLLEPLVRLEMVAWDPLNAARRL----GNGG-------FQCFKWYRCFFDFAASDSSGDGAAAGRKDGSAITTASASDPDRNLVPTLLEHVALPSLCVCLAESYDAWSERETAAAVAAVEEVLVYXXXXXXXXXXXXXXXXXXXXAVRSLCVPGGSAFSAESGAAAAELFWRQLWRAVKLLGNIALWQDLILPHTLAPIATGELLERRVAPALLRALHGGGKG 1365
            CG LREKE M+ E  A  A L R+   + + RR +DQEDAL +   A+E+ G    ++   +            +    + S+ +G        LDEFGRD   +  +                                                                       A  EA  SG EESD+E E    R   + +AA V+ EDV  E K+L  +   FE WK   P  Y  AY  TALP++LEP VR+EMVAW+PL   R +    G GG        + F W+   F++  S   G            +      DPD  LVP L+E VA+  L   L+E YD +SERET  A++A++ +L+Y                    A+  LC+P       E+G +  E   RQ++ A+KL  N   W  ++ P  LA +  G LL+ ++A AL   L   G+G
Sbjct:  325 CGCLREKEAMVGELEAAMAQLWREGYERRMSRRVQDQEDALEE---ALETDGKEQQSSQAGMLLSLQGYDPEVVIALKESLSKGTGAPGAAHHDLDEFGRDASGEMSKERRRRERRGRLASVLERINDGTGGDK---------------------------------------------AEAEATFSGAEESDSEVETLRTRQAKLLEAAGVIFEDVADEFKALDAVVQRFEDWKRKLPKDYHTAYVPTALPQVLEPYVRVEMVAWNPLGPVRSMEDGDGAGGKDFGAAAIEAFPWFERLFEYGQSQEEGS-----------VPEQEGEDPDDRLVPQLVEKVAVSRLEGLLSECYDPFSERETQRAISAIQGLLIYEPGKHALESLLRAPFSRLEKAITKLCLP---LLGPEAGISLWEFQRRQIFVALKLFRNACFWHQVLAPRPLASLVLGVLLDGKLASALENRLDNTGRG 737          
BLAST of mRNA_P-wetherbeei_contig1777.6.2 vs. uniprot
Match: W7TSY7_9STRA (Gc-rich sequence dna-binding factor 1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSY7_9STRA)

HSP 1 Score: 152 bits (383), Expect = 2.010e-36
Identity = 135/475 (28.42%), Postives = 191/475 (40.21%), Query Frame = 1
Query:    1 CGMLREKEGMISEAAATTAALRRQRLAKTLRRRAEDQEDALLDCAAAVESAGPYMAAADGPLXXXXXXXXXXXXVTTASRRS------GPV---LDEFGRDGGEQHERXXXXXXXXXXXXXXXXXXXXXRWAXXXXXXXXXXXXXXXXXXXXPSSAAPRWLRAGPRPAPAALWPAALATAACEAXXSGGEESDAEAEAEERRATMVADAAEVVLEDVDLEIKSLREIRAFFEHWKGAHPAQYAQAYCSTALPKLLEPLVRLEMVAWDPLNAARRL-----------GNGGFQCFKWYRCFFDFAASDSSGDGAAAGRKDGSAITTASASDPDRNLVPTLLEHVALPSLCVCLAESYDAWSERETAAAVAAVEEVLVYXXXXXXXXXXXXXXXXXXXXAVRSLCVPGGSAFSAESGAAAAELFWRQLWRAVKLLGNIALWQDLILPHTLAPIATGELLERRVAPALLRALHGGGKG 1365
            CG LREKE M+ E  A  A L R+   + + RR +DQEDAL +   A+E+ G    ++   +            +      S      GP    LDEFGRD   +  +                                                                       A  EA  SG EESD+E E    R   + +AA V+ EDV  E K+L  +   FE WK   P  Y  AY   ALP++LEP VR+EMV W+PL   R +           G    + F W+   F++      G    A +++G         DPD  LVP L+E VA+  L   L E YD +SERET  A++A++ +L+Y                    A+  LC+P       E+G +  E   RQ++ A+KL  N+  W  ++ P  LA +  G LL+ ++A AL   L   G+G
Sbjct:  163 CGCLREKEAMVRELEAAMAQLWREGYERRMSRRVQDQEDALEE---ALETDGKEQQSSQAGMLLSLQGYAPEVVIALKESLSKGAGVPGPAHHDLDEFGRDASGKMSKDRRRRERRGRLASVLERINDGTGGDK---------------------------------------------AEAEATFSGAEESDSEVETLRTRQAKLLEAAGVIFEDVADEFKALDAVVQRFEDWKRKFPKDYHTAYVPIALPQVLEPYVRVEMVTWNPLGPVRSMEDGDGAGGKDVGGAAIEAFPWFERLFEYGQFQEEGS---APKQEGE--------DPDDRLVPQLVEKVAVSRLEGLLNECYDPFSERETQRAISAIQGLLIYEPGKHALESLLRAPFSRLEKAITKLCLP---LLGPEAGISLWEFQRRQIFVALKLFRNVCFWHQVLAPRPLASLVLGVLLDGKLASALENRLDNTGRG 575          
BLAST of mRNA_P-wetherbeei_contig1777.6.2 vs. uniprot
Match: A0A7S3UVN3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVN3_HETAK)

HSP 1 Score: 135 bits (340), Expect = 4.940e-32
Identity = 104/315 (33.02%), Postives = 135/315 (42.86%), Query Frame = 1
Query:  496 AALATAACEAXXSGGEESDAEAEAEERRATMVADAAEVVLEDVDLEIKSLREIRAFFEHWKGAHPAQYAQAYCSTALPKLLEPLVRLEMVAWDPLNAA--RRLGNG-----------------------------GFQCFKWYRCFFDFAASDSSGDGAAAGRKDGSAITTASASDPDRNLVPTLLEHVALPSLCVCLAESYDAWSERETAAAVAAVEEVLVYXXXXXXXXXXXXXXXXXXXXAVRSLCVPGGSAFSAESGAAAAELFWRQLWRAVKLLGNIALWQDLILPHTLAPIATGELLERRVAPALLRAL 1347
            AA A A   A  SG E+SD E     RR   + +AA V+LEDV  E + L  ++  FE WK   P +YAQ YCS +LP LLEP VRLE++AWDPL  A   R G G                              F+ F WYR F D+AA   +   A            A  +DPD NLVP L+   A P       E  D  S        AA+ E+L+Y                     +  LC+P        S A A E    Q++ A+KL  N A++Q  I P  L  +A  EL+ +++ P L   L
Sbjct:    1 AAEAEARAAAFLSGAEDSDGEVATLARREGKLLEAAAVILEDVGEEHRDLGRLKRLFEEWKRDFPEEYAQVYCSLSLPPLLEPFVRLELLAWDPLAHALMTRRGEGEGEVAVVGXXXXXXXXENGAWAVDRVPVEDFEVFNWYRVFCDYAAGIPTPKNA-----------PAEETDPDENLVPKLVAAAAAPRAAAAAREGLDPRSAAHCRGLAAALGELLLYEPPPAALGPLCQAILVHFKEEIDELCIP----LLEVSNADALEFTREQMYTAIKLYKNCAIFQQYISPEALTSLAVIELVGKKLVPVLSHLL 300          
BLAST of mRNA_P-wetherbeei_contig1777.6.2 vs. uniprot
Match: A0A7S3UVL0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVL0_HETAK)

HSP 1 Score: 130 bits (327), Expect = 7.050e-31
Identity = 101/306 (33.01%), Postives = 131/306 (42.81%), Query Frame = 1
Query:  496 AALATAACEAXXSGGEESDAEAEAEERRATMVADAAEVVLEDVDLEIKSLREIRAFFEHWKGAHPAQYAQAYCSTALPKLLEPLVRLEMVAWDPLNAA--RRLGNG-----------------------------GFQCFKWYRCFFDFAASDSSGDGAAAGRKDGSAITTASASDPDRNLVPTLLEHVALPSLCVCLAESYDAWSERETAAAVAAVEEVLVYXXXXXXXXXXXXXXXXXXXXAVRSLCVPGGSAFSAESGAAAAELFWRQLWRAVKLLGNIALWQDLILPHTLAPIATGELLERR 1320
            AA A A   A  SG E+SD E     RR   + +AA V+LEDV  E + L  ++  FE WK   P +YAQ YCS +LP LLEP VRLE++AWDPL  A   R G G                              F+ F WYR F D+AA   +   A            A  +DPD NLVP L+   A P       E  D  S        AA+ E+L+Y                     +  LC+P        S A A E    Q++ A+KL  N A++Q  I P  L  +A  EL+ ++
Sbjct:    1 AAEAEARAAAFLSGAEDSDGEVATLARREGKLLEAAAVILEDVGEEHRDLGRLKRLFEEWKRDFPEEYAQVYCSLSLPPLLEPFVRLELLAWDPLAHALMTRRGEGEGEVAVVGXXXXXXXXENGAWAVDRVPVEDFEVFNWYRVFCDYAAGIPTPKNA-----------PAEETDPDENLVPKLVAAAAAPRAAAAAREGLDPRSAAHCRGLAAALGELLLYEPPPAALGPLCQAILVHFKEEIDELCIP----LLEVSNADALEFTREQMYTAIKLYKNCAIFQQYISPEALTSLAVIELVGKK 291          
BLAST of mRNA_P-wetherbeei_contig1777.6.2 vs. uniprot
Match: A0A1Y1HYJ4_KLENI (Transcriptional regulators binding to the GC-rich sequences n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HYJ4_KLENI)

HSP 1 Score: 116 bits (290), Expect = 5.060e-24
Identity = 81/265 (30.57%), Postives = 120/265 (45.28%), Query Frame = 1
Query:  544 ESDAEAEAEERRATMVADAAEVVLEDVDLEIKSLREIRAFFEHWKGAHPAQYAQAYCSTALPKLLEPLVRLEMVAWDPLNAARRLGNGGFQCFKWYRCFFDFAASDSSGDGAAAGRKDGSAITTASASDPDRNLVPTLLEHVALPSLCVCLAESYDAWSERETAAAVAAVEEVLVYXXXXXXXXXXXXXXXXXXXX-AVRSLCVPGGSAFSAESGAAAAELFWRQLWRAVKLLGNIALWQDLILPHTLAPIATGELLERRVAPAL 1335
            ES+ E  A E+    +  AAE V  D D E ++L +++   E WK  +PA Y  AY S + P L  P V+LE++ WDPL+     G  GF   +WY+  F++   +S+G                   D D N+VPTL+E VALP L   +   +D  S + T    AAV EV +Y                      V  L VP  +     +   A  +       AV++L NI LW+D++ P  L  +A  +L+  ++ P L
Sbjct:  540 ESEDEVSAFEKGRGELVLAAEAVFRDADEEFRTLAKVKERLEEWKRKYPAAYRDAYVSLSAPALFAPYVKLELLKWDPLH-----GEAGFDGVRWYQELFEYGMGNSNG-------------AEPDPDDADANMVPTLIEKVALPILLHLITYCWDPQSTKRTVQIAAAVSEVQIYVPPESEPVRDLLSAVRSRIADVVEKLVVPAWTPALLAAAPQAVAVSAEHFGAAVRVLRNIVLWRDILPPGDLETLALDQLVAAKLLPHL 786          
BLAST of mRNA_P-wetherbeei_contig1777.6.2 vs. uniprot
Match: A0A5C7HC49_9ROSI (GCFC domain-containing protein n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7HC49_9ROSI)

HSP 1 Score: 111 bits (277), Expect = 2.380e-22
Identity = 82/267 (30.71%), Postives = 122/267 (45.69%), Query Frame = 1
Query:  532 SGGEESDAEAEAEERRATMVADAAEVVLEDVDLEIKSLREIRAFFEHWKGAHPAQYAQAYCSTALPKLLEPLVRLEMVAWDPLNAARRLGNGGFQCFKWYRCFFDFAASDSSGDGAAAGRKDGSAITTASASDPDRNLVPTLLEHVALPSLCVCLAESYDAWSERETAAAVAAVEEVLVYXXXXXXXXXXXXXXXXXXXX-AVRSLCVPGGSAFSAESGAAAAELFWRQLWRAVKLLGNIALWQDLILPHTLAPIATGELLERRVAP 1329
            S  +ESD+E+ A + R   +   A+ +  D   E   L  ++  FE WK  +P+ Y  AY S + P ++ P VRLE++ WDPL+      +  F   KW+   F++   +   D AA               D D NLVPTL+E VALP L   +A  +D  S +ET  AV+A    + Y                     AV S+ VP  S     +   AA +   +    V+L+ NI LW++++    L  +A  ELL R+V P
Sbjct:  613 SSTDESDSESSAYQSRRESLLQIADQIFSDASEEYSQLSSVKERFEEWKRDYPSSYRDAYMSLSAPAIMSPYVRLELLKWDPLHE-----DADFSEMKWHSLLFNYGLPEDGKDFAA--------------DDADANLVPTLVEKVALPILHHEIAHCWDMLSTQETRNAVSATSLAITYVPTSSEALEELSRTIRTRLAEAVGSITVPTWSPLVMNAVPNAARIAAYRFGMCVRLMRNICLWKEILALPILEKLALDELLCRKVLP 860          
BLAST of mRNA_P-wetherbeei_contig1777.6.2 vs. uniprot
Match: A0A059BFV8_EUCGR (GCFC domain-containing protein n=8 Tax=Myrtoideae TaxID=1699513 RepID=A0A059BFV8_EUCGR)

HSP 1 Score: 110 bits (275), Expect = 4.260e-22
Identity = 86/267 (32.21%), Postives = 123/267 (46.07%), Query Frame = 1
Query:  532 SGGEESDAEAEAEERRATMVADAAEVVLEDVDLEIKSLREIRAFFEHWKGAHPAQYAQAYCSTALPKLLEPLVRLEMVAWDPLNAARRLGNGGFQCFKWYRCFFDFAASDSSGDGAAAGRKDGSAITTASASDPDRNLVPTLLEHVALPSLCVCLAESYDAWSERETAAAVAAVEEVLVYXXXXXXXXXXXXXXXXXXXX-AVRSLCVPGGSAFSAESGAAAAELFWRQLWRAVKLLGNIALWQDLILPHTLAPIATGELLERRVAP 1329
            S  +ESD+E+ A E    ++   A+ + +D   E   L E++  FE WK  + + Y  AY S ++P +  P VRLE++ WDPL+      +  F   KW+   FD+              +DGS        D D NLVP L+E VALP L   +A S+D  S RET  AVAA   V  Y                     AV  L VP  S    ++   AA L   +   +V+LL NI LW++++    L  +A  ELL  ++ P
Sbjct:  607 SSTDESDSESRAYESNRDLLLQTADQIFDDTAEEYAQLSEVKQQFEKWKRDYSSSYRDAYMSLSVPNIFSPYVRLELLKWDPLHE-----DSDFFKMKWHSLLFDYGLP-----------QDGSDFAP---DDADSNLVPGLVEKVALPILHHEIAHSWDMLSTRETKHAVAATTLVTNYVPASSEGLAELLVAVRTRLADAVAKLTVPTWSPLVMKAVPGAARLAAYRFGVSVRLLRNICLWKEILALPVLEKLALDELLGGKILP 854          
BLAST of mRNA_P-wetherbeei_contig1777.6.2 vs. uniprot
Match: A0A392LZ19_9FABA (GC-rich sequence DNA-binding factor-like protein (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392LZ19_9FABA)

HSP 1 Score: 107 bits (268), Expect = 1.700e-21
Identity = 80/267 (29.96%), Postives = 125/267 (46.82%), Query Frame = 1
Query:  532 SGGEESDAEAEAEERRATMVADAAEVVLEDVDLEIKSLREIRAFFEHWKGAHPAQYAQAYCSTALPKLLEPLVRLEMVAWDPLNAARRLGNGGFQCFKWYRCFFDFAASDSSGDGAAAGRKDGSAITTASASDPDRNLVPTLLEHVALPSLCVCLAESYDAWSERETAAAVAAVEEVLVYXXXXXXXXXXXXXXXXXXXX-AVRSLCVPGGSAFSAESGAAAAELFWRQLWRAVKLLGNIALWQDLILPHTLAPIATGELLERRVAP 1329
            S  +ESD+E++A + +  +V  AA+ +  D   E   L  ++   E WK  + + Y  AY S +LP +  P VRLE++ WDPL+         FQ   WY+  F +   +   DG   G  DG         D D  LVP L+E VALP L   L+  +D  S++ET  A+AA + ++ +                     AV ++ VP  +     +   AA++   +   +V+LL NI LW+D+     L  +A  ELL  ++ P
Sbjct:  186 SSTDESDSESQAYQSQRDLVLQAADEIFSDASDEYSQLSLVKKRMEEWKREYSSSYNAAYISLSLPLIFSPYVRLELLRWDPLHKGL-----DFQDMNWYKLLFTYGLPE---DGKDFGHDDG---------DADLELVPNLVEKVALPILHYELSHCWDMLSQQETTNAIAATKSIVQHVSHESEALAELLVSIRTRLADAVANITVPTWTPLVLATVPDAAQVAAYRFGVSVRLLRNICLWKDIFAMPVLEKLALDELLYAKILP 435          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1777.6.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JUF7_9PHAE3.280e-4632.61GCFC domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835YVY7_9STRA3.560e-3843.54GCFC domain-containing protein n=1 Tax=Tribonema m... [more]
A0A4D9D9I3_9STRA2.140e-3728.84GCFC domain-containing protein n=2 Tax=Monodopsida... [more]
W7TSY7_9STRA2.010e-3628.42Gc-rich sequence dna-binding factor 1 n=1 Tax=Nann... [more]
A0A7S3UVN3_HETAK4.940e-3233.02Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3UVL0_HETAK7.050e-3133.01Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1Y1HYJ4_KLENI5.060e-2430.57Transcriptional regulators binding to the GC-rich ... [more]
A0A5C7HC49_9ROSI2.380e-2230.71GCFC domain-containing protein n=1 Tax=Acer yangbi... [more]
A0A059BFV8_EUCGR4.260e-2232.21GCFC domain-containing protein n=8 Tax=Myrtoideae ... [more]
A0A392LZ19_9FABA1.700e-2129.96GC-rich sequence DNA-binding factor-like protein (... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1777contigP-wetherbeei_contig1777:5055..6647 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LAU3
Preferred namePAXBP1
PFAMsGCFC,NTR2
Model size1365
Max annot lvl2759|Eukaryota
KEGG koko:K09061,ko:K13211,ko:K17536,ko:K20476
KEGG Pathwayko04013,map04013
Hectar predicted targeting categoryother localisation
GOsGO:0000122,GO:0000245,GO:0000375,GO:0000377,GO:0000398,GO:0000976,GO:0000977,GO:0000978,GO:0000981,GO:0000982,GO:0000987,GO:0001012,GO:0001067,GO:0001078,GO:0001227,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006355,GO:0006357,GO:0006396,GO:0006397,GO:0006417,GO:0006725,GO:0006807,GO:0007049,GO:0008134,GO:0008150,GO:0008152,GO:0008284,GO:0008380,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010638,GO:0014842,GO:0014857,GO:0016043,GO:0016070,GO:0016071,GO:0017148,GO:0019219,GO:0019222,GO:0022402,GO:0022607,GO:0022613,GO:0022618,GO:0030371,GO:0031056,GO:0031058,GO:0031060,GO:0031062,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031399,GO:0031401,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032270,GO:0032991,GO:0033043,GO:0033044,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0042023,GO:0042127,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0043933,GO:0044085,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044786,GO:0045182,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065003,GO:0065007,GO:0070013,GO:0071008,GO:0071014,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0140110,GO:1901360,GO:1901363,GO:1901576,GO:1902275,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1905269,GO:1990837,GO:1990904,GO:2000112,GO:2000113,GO:2000288,GO:2000291,GO:2001141,GO:2001252
Exons3
Evalue3.9e-42
EggNOG OGsKOG2136@1|root,KOG2136@2759|Eukaryota
DescriptionRNA polymerase II proximal promoter sequence-specific DNA binding
Cds size1359
COG categoryEGP
BRITEko00000,ko00001,ko01001,ko03000,ko03041,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186126.391041-CDS-P-wetherbeei_contig1777:5054..52641683186126.391041-CDS-P-wetherbeei_contig1777:5054..5264Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1777 5055..5264 -
1683186126.401048-CDS-P-wetherbeei_contig1777:5423..57681683186126.401048-CDS-P-wetherbeei_contig1777:5423..5768Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1777 5424..5768 -
1683186126.4092634-CDS-P-wetherbeei_contig1777:5837..66411683186126.4092634-CDS-P-wetherbeei_contig1777:5837..6641Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1777 5838..6641 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186126.4173357-UTR-P-wetherbeei_contig1777:6641..66471683186126.4173357-UTR-P-wetherbeei_contig1777:6641..6647Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1777 6642..6647 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1777.6.2prot_P-wetherbeei_contig1777.6.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1777 5055..6641 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1777.6.2

>prot_P-wetherbeei_contig1777.6.2 ID=prot_P-wetherbeei_contig1777.6.2|Name=mRNA_P-wetherbeei_contig1777.6.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=453bp
MLREKEGMISEAAATTAALRRQRLAKTLRRRAEDQEDALLDCAAAVESAG
PYMAAADGPLAAAGGPVAGAAGVTTASRRSGPVLDEFGRDGGEQHERERE
QRARARERRRRQLQQRVRRWAAASAAAADAADARGGAAAASPSSAAPRWL
RAGPRPAPAALWPAALATAACEAAASGGEESDAEAEAEERRATMVADAAE
VVLEDVDLEIKSLREIRAFFEHWKGAHPAQYAQAYCSTALPKLLEPLVRL
EMVAWDPLNAARRLGNGGFQCFKWYRCFFDFAASDSSGDGAAAGRKDGSA
ITTASASDPDRNLVPTLLEHVALPSLCVCLAESYDAWSERETAAAVAAVE
EVLVYEPSTAARRQLQEAAAAALAAAVRSLCVPGGSAFSAESGAAAAELF
WRQLWRAVKLLGNIALWQDLILPHTLAPIATGELLERRVAPALLRALHGG
GKG
back to top

mRNA from alignment at P-wetherbeei_contig1777:5055..6647-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1777.6.2 ID=mRNA_P-wetherbeei_contig1777.6.2|Name=mRNA_P-wetherbeei_contig1777.6.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1593bp|location=Sequence derived from alignment at P-wetherbeei_contig1777:5055..6647- (Phaeothamnion wetherbeei SAG_119_79)
TGCGGTATGTTGCGCGAAAAGGAGGGCATGATCTCCGAGGCCGCCGCCAC CACTGCCGCCCTCCGCCGCCAGCGCCTCGCCAAGACTCTTCGCCGCCGCG CGGAGGACCAGGAGGACGCCCTGCTGGACTGCGCCGCCGCCGTCGAGTCG GCGGGCCCCTACATGGCGGCGGCGGACGGCCCGCTGGCGGCGGCTGGCGG CCCAGTGGCGGGGGCCGCGGGGGTGACGACGGCATCGCGCCGCTCCGGAC CGGTTCTGGACGAGTTCGGCCGCGACGGCGGCGAGCAGCACGAGCGGGAG CGGGAGCAACGCGCCCGCGCGCGCGAGCGGCGGCGGCGCCAGCTGCAGCA GCGGGTGCGGCGATGGGCTGCTGCTAGCGCTGCTGCAGCAGACGCGGCAG ACGCCAGGGGAGGAGCGGCGGCGGCTTCACCGTCATCGGCGGCGCCGAGA TGGCTGCGGGCGGGGCCGCGGCCGGCGCCGGCGGCGCTCTGGCCCGCAGC GCTCGCCACGGCGGCATGCGAGGCGGCAGCATCTGGCGGCGAAGAGAGCG ACGCCGAGGCGGAGGCCGAGGAGCGGCGCGCCACCATGGTGGCGGACGCT GCCGAGGTTGTCCTGGAGGACGTCGACCTGGAGATCAAGTCGTTGCGGGA GATTCGGGCCTTCTTCGAGCACTGGAAGGGCGCGCACCCAGCGCAGTATG CGCAGGCCTACTGCTCCACGGCGCTCCCGAAACTGCTAGAGCCGCTGGTG CGGCTGGAGATGGTGGCGTGGGACCCGCTGAATGCGGCGCGGCGACTGGG GAACGGCGGTGTTGGTGGTGGCAGTATTGGCGGCTTTGGCGGCAGCGGTG GTGACGAAGAGGAGGATGAGGACGGTCAGTTCCAGTGCTTCAAATGGTAC CGCTGCTTCTTCGACTTTGCTGCGTCGGACAGCAGCGGTGACGGAGCGGC GGCGGGAAGAAAAGACGGCTCCGCCATCACCACCGCCTCTGCGTCCGATC CAGACAGAAACCTCGTCCCAACCCTGCTCGAGCATGTGGCGCTGCCGTCG CTGTGCGTCTGCCTGGCAGAATCGTATGACGCGTGGTCGGAGCGCGAAAC AGCGGCCGCCGTCGCCGCCGTGGAGGAAGTGCTGGTCTACGAGCCATCTA CGGCGGCGCGGCGGCAGCTGCAGGAGGCGGCGGCGGCCGCGCTGGCGGCC GCCGTGCGCTCGCTGTGCGTGCCCGTGCTTAAGCGCGGCGCCTTTGCACG AAGGGGCGGCGGTGGCAGCGCTCTGAATGGCGCGGCGGTGGCCGCAACAG CAATGCCAGGCCGGGGCGGGCGCGGTCGGGCGGGGCTCGGGTCTGCCGCG GTTGCAAGCGATTCCGGTGGTAGGGAAGAGCAGGGAGGATCCGCTTTTTC GGCGGAGAGCGGCGCCGCAGCGGCAGAGCTATTTTGGCGCCAGCTCTGGC GGGCCGTCAAGCTCTTAGGCAACATTGCGCTTTGGCAGGATCTCATACTG CCGCACACGCTCGCGCCTATCGCCACGGGCGAGCTTCTCGAGAGGCGCGT CGCGCCGGCGCTGCTCCGCGCGCTCCACGGTGGCGGCAAAGGC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig1777:5055..6647-

>mRNA_P-wetherbeei_contig1777.6.2 ID=mRNA_P-wetherbeei_contig1777.6.2|Name=mRNA_P-wetherbeei_contig1777.6.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1359bp|location=Sequence derived from alignment at P-wetherbeei_contig1777:5055..6647- (Phaeothamnion wetherbeei SAG_119_79)
ATGTTGCGCGAAAAGGAGGGCATGATCTCCGAGGCCGCCGCCACCACTGC
CGCCCTCCGCCGCCAGCGCCTCGCCAAGACTCTTCGCCGCCGCGCGGAGG
ACCAGGAGGACGCCCTGCTGGACTGCGCCGCCGCCGTCGAGTCGGCGGGC
CCCTACATGGCGGCGGCGGACGGCCCGCTGGCGGCGGCTGGCGGCCCAGT
GGCGGGGGCCGCGGGGGTGACGACGGCATCGCGCCGCTCCGGACCGGTTC
TGGACGAGTTCGGCCGCGACGGCGGCGAGCAGCACGAGCGGGAGCGGGAG
CAACGCGCCCGCGCGCGCGAGCGGCGGCGGCGCCAGCTGCAGCAGCGGGT
GCGGCGATGGGCTGCTGCTAGCGCTGCTGCAGCAGACGCGGCAGACGCCA
GGGGAGGAGCGGCGGCGGCTTCACCGTCATCGGCGGCGCCGAGATGGCTG
CGGGCGGGGCCGCGGCCGGCGCCGGCGGCGCTCTGGCCCGCAGCGCTCGC
CACGGCGGCATGCGAGGCGGCAGCATCTGGCGGCGAAGAGAGCGACGCCG
AGGCGGAGGCCGAGGAGCGGCGCGCCACCATGGTGGCGGACGCTGCCGAG
GTTGTCCTGGAGGACGTCGACCTGGAGATCAAGTCGTTGCGGGAGATTCG
GGCCTTCTTCGAGCACTGGAAGGGCGCGCACCCAGCGCAGTATGCGCAGG
CCTACTGCTCCACGGCGCTCCCGAAACTGCTAGAGCCGCTGGTGCGGCTG
GAGATGGTGGCGTGGGACCCGCTGAATGCGGCGCGGCGACTGGGGAACGG
CGGTTTCCAGTGCTTCAAATGGTACCGCTGCTTCTTCGACTTTGCTGCGT
CGGACAGCAGCGGTGACGGAGCGGCGGCGGGAAGAAAAGACGGCTCCGCC
ATCACCACCGCCTCTGCGTCCGATCCAGACAGAAACCTCGTCCCAACCCT
GCTCGAGCATGTGGCGCTGCCGTCGCTGTGCGTCTGCCTGGCAGAATCGT
ATGACGCGTGGTCGGAGCGCGAAACAGCGGCCGCCGTCGCCGCCGTGGAG
GAAGTGCTGGTCTACGAGCCATCTACGGCGGCGCGGCGGCAGCTGCAGGA
GGCGGCGGCGGCCGCGCTGGCGGCCGCCGTGCGCTCGCTGTGCGTGCCCG
GAGGATCCGCTTTTTCGGCGGAGAGCGGCGCCGCAGCGGCAGAGCTATTT
TGGCGCCAGCTCTGGCGGGCCGTCAAGCTCTTAGGCAACATTGCGCTTTG
GCAGGATCTCATACTGCCGCACACGCTCGCGCCTATCGCCACGGGCGAGC
TTCTCGAGAGGCGCGTCGCGCCGGCGCTGCTCCGCGCGCTCCACGGTGGC
GGCAAAGGC
back to top