mRNA_P-wetherbeei_contig1777.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1777.4.1
Unique NamemRNA_P-wetherbeei_contig1777.4.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1777.4.1 vs. uniprot
Match: A0A7S1TWN3_9STRA (Peptidylprolyl isomerase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TWN3_9STRA)

HSP 1 Score: 155 bits (393), Expect = 1.710e-46
Identity = 74/124 (59.68%), Postives = 93/124 (75.00%), Query Frame = 1
Query:    1 AGAAFLAAEANKDGAVQTPSGLVIHTTKKGQGPSPSLRDTVRVHYHGTLIDGTVFDSSVERGKPISFALNQVIVGWQEGLRSMKTGGTSRLVIPSELAYGDRGAGRAVPPGSVLVFDVQLLAVE 372
            AG   L   A +D AV+T SGLV+ T K+G G SPS  DTV+VHYHGTL DGTVFDSSVERG+PI+F LN+VI GW EGL+ MK GG ++L +PS+LAYGD   G  +P GS L+F+V+LL ++
Sbjct:   20 AGLKALETAAEEDNAVKTDSGLVVQTIKEGDGASPSATDTVKVHYHGTLADGTVFDSSVERGEPIAFPLNRVIAGWTEGLQLMKEGGKAKLTVPSDLAYGDAPQGDKIPGGSTLIFEVELLEIQ 143          
BLAST of mRNA_P-wetherbeei_contig1777.4.1 vs. uniprot
Match: A0A2E7JVB0_9BACT (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A2E7JVB0_9BACT)

HSP 1 Score: 154 bits (388), Expect = 1.360e-44
Identity = 74/123 (60.16%), Postives = 92/123 (74.80%), Query Frame = 1
Query:    4 GAAFLAAEANKDGAVQTPSGLVIHTTKKGQGPSPSLRDTVRVHYHGTLIDGTVFDSSVERGKPISFALNQVIVGWQEGLRSMKTGGTSRLVIPSELAYGDRGAGRAVPPGSVLVFDVQLLAVE 372
            GAAF+   A + GAV+T SGLV    + G G  P+  D V+VHYHGTLIDGTVFDSSVER +PISF LN VI GW EG+  MK GG ++LVIPS+LAYGD+G    +PPG+ L+F+V+LLA+E
Sbjct:  109 GAAFIEKSAAEPGAVKTASGLVYIEMRPGTGAQPTPSDKVKVHYHGTLIDGTVFDSSVERNEPISFGLNAVIAGWTEGVGMMKVGGKAKLVIPSDLAYGDQGRPPTIPPGATLIFEVELLAIE 231          
BLAST of mRNA_P-wetherbeei_contig1777.4.1 vs. uniprot
Match: A0A2P8HN88_9BACT (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chitinophaga niastensis TaxID=536980 RepID=A0A2P8HN88_9BACT)

HSP 1 Score: 152 bits (385), Expect = 3.860e-44
Identity = 75/124 (60.48%), Postives = 88/124 (70.97%), Query Frame = 1
Query:    1 AGAAFLAAEANKDGAVQTPSGLVIHTTKKGQGPSPSLRDTVRVHYHGTLIDGTVFDSSVERGKPISFALNQVIVGWQEGLRSMKTGGTSRLVIPSELAYGDRGAGRAVPPGSVLVFDVQLLAVE 372
            AG  FLA    K G V  PSGL     K G+GP P++ D V+ HYHGTLIDGTVFDSSV+RG+PISF ++ VI GW E L+ M  G   RL +PSELAYGDRGAG  + PGS LVFDV+LLA+E
Sbjct:  107 AGVKFLAENKVKPGVVTLPSGLQYEILKAGEGPKPTINDKVKTHYHGTLIDGTVFDSSVDRGEPISFPVSGVIKGWTEALQLMPVGSKWRLFVPSELAYGDRGAGPKIGPGSTLVFDVELLAIE 230          
BLAST of mRNA_P-wetherbeei_contig1777.4.1 vs. uniprot
Match: UPI001B07F6F4 (FKBP-type peptidyl-prolyl cis-trans isomerase n=2 Tax=unclassified Chitinophaga TaxID=2619133 RepID=UPI001B07F6F4)

HSP 1 Score: 152 bits (383), Expect = 1.020e-43
Identity = 75/124 (60.48%), Postives = 87/124 (70.16%), Query Frame = 1
Query:    1 AGAAFLAAEANKDGAVQTPSGLVIHTTKKGQGPSPSLRDTVRVHYHGTLIDGTVFDSSVERGKPISFALNQVIVGWQEGLRSMKTGGTSRLVIPSELAYGDRGAGRAVPPGSVLVFDVQLLAVE 372
            AG  FLA   +K G V  P GL     K G GP P++ D V+ HYHGTLIDGTVFDSSV+RG+PISF ++ VI GW E L+ M  G   RL IPSELAYGDRGAG  + PGS LVFDV+LLA+E
Sbjct:  117 AGLKFLAENKSKPGVVTLPDGLQYEILKAGDGPKPTINDKVKTHYHGTLIDGTVFDSSVDRGQPISFPVSGVIKGWTEALQLMPVGSKWRLFIPSELAYGDRGAGPKIGPGSTLVFDVELLAIE 240          
BLAST of mRNA_P-wetherbeei_contig1777.4.1 vs. uniprot
Match: A0A2E9MGZ0_9BACT (Peptidyl-prolyl cis-trans isomerase n=3 Tax=FCB group TaxID=1783270 RepID=A0A2E9MGZ0_9BACT)

HSP 1 Score: 151 bits (382), Expect = 1.230e-43
Identity = 73/120 (60.83%), Postives = 91/120 (75.83%), Query Frame = 1
Query:   13 FLAAEANKDGAVQTPSGLVIHTTKKGQGPSPSLRDTVRVHYHGTLIDGTVFDSSVERGKPISFALNQVIVGWQEGLRSMKTGGTSRLVIPSELAYGDRGAGRAVPPGSVLVFDVQLLAVE 372
            FLAAEA  +GA +T SGLV      G GP+P+++D++ VHYHGTL DGTVFDSSVER +PI FAL QVI GWQEGL+ MK GG +RLVIP +LAYG RG G  +PP + L+F+V+L+ V 
Sbjct:  116 FLAAEAQVEGAQRTASGLVYQEVVAGTGPNPTVQDSITVHYHGTLEDGTVFDSSVERDEPIKFALGQVIPGWQEGLQMMKEGGKARLVIPGDLAYGPRGQG-TIPPNATLIFEVELITVH 234          
BLAST of mRNA_P-wetherbeei_contig1777.4.1 vs. uniprot
Match: A0A1H4C347_9BACT (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Chitinophaga terrae (ex Kim and Jung 2007) TaxID=408074 RepID=A0A1H4C347_9BACT)

HSP 1 Score: 151 bits (382), Expect = 1.330e-43
Identity = 73/123 (59.35%), Postives = 87/123 (70.73%), Query Frame = 1
Query:    4 GAAFLAAEANKDGAVQTPSGLVIHTTKKGQGPSPSLRDTVRVHYHGTLIDGTVFDSSVERGKPISFALNQVIVGWQEGLRSMKTGGTSRLVIPSELAYGDRGAGRAVPPGSVLVFDVQLLAVE 372
            G  FLAA   K+G V  P GL     + G GP P++ D V+ HYHGTLIDGTVFDSSVERG+PISF ++ VI GW E L+ M  G   RL IPS+LAYGDRGAG  + PGS L+FDV+LLA+E
Sbjct:  115 GLKFLAANKTKEGVVTLPDGLQYQILQAGNGPKPTINDKVKTHYHGTLIDGTVFDSSVERGQPISFPVSGVIKGWTEALQLMPVGSKWRLFIPSDLAYGDRGAGPKIGPGSTLIFDVELLAIE 237          
BLAST of mRNA_P-wetherbeei_contig1777.4.1 vs. uniprot
Match: A0A7V4CYN4_9BACT (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A7V4CYN4_9BACT)

HSP 1 Score: 150 bits (380), Expect = 1.760e-43
Identity = 74/122 (60.66%), Postives = 91/122 (74.59%), Query Frame = 1
Query:    4 GAAFLAAEANKDGAVQTPSGLVIHTTKKGQGPSPSLRDTVRVHYHGTLIDGTVFDSSVERGKPISFALNQVIVGWQEGLRSMKTGGTSRLVIPSELAYGDRGAGRAVPPGSVLVFDVQLLAV 369
            G AF+   A +  A +T SGLVI T K G GPSP+ +D V+VHYHGTL DGTVFDSSV+RG+PI+F L+ VI  W EG+  MK GG SRLV PSELAYGDRGAG  + PG+ LVF+++LL +
Sbjct:  100 GQAFIDKPAAEKNATKTASGLVITTIKPGTGPSPTAKDKVKVHYHGTLTDGTVFDSSVQRGEPITFPLDGVIRCWTEGVPMMKVGGKSRLVCPSELAYGDRGAGGRIKPGATLVFEIELLEI 221          
BLAST of mRNA_P-wetherbeei_contig1777.4.1 vs. uniprot
Match: A0A561PGB1_9BACT (Peptidyl-prolyl cis-trans isomerase n=3 Tax=Chitinophaga TaxID=79328 RepID=A0A561PGB1_9BACT)

HSP 1 Score: 151 bits (381), Expect = 1.940e-43
Identity = 75/124 (60.48%), Postives = 87/124 (70.16%), Query Frame = 1
Query:    1 AGAAFLAAEANKDGAVQTPSGLVIHTTKKGQGPSPSLRDTVRVHYHGTLIDGTVFDSSVERGKPISFALNQVIVGWQEGLRSMKTGGTSRLVIPSELAYGDRGAGRAVPPGSVLVFDVQLLAVE 372
            AG  FLA    K G V  P GL     K+G GP P++ D V+ HYHGTLIDGTVFDSSVERG+PISF ++ VI GW E L+ M  G   RL IPSELAYGDRGAG  + PG+ LVFDV+LLA+E
Sbjct:  115 AGLKFLAENKVKPGVVTLPDGLQYQILKEGNGPKPTINDKVKTHYHGTLIDGTVFDSSVERGQPISFPVSGVIKGWTEALQLMPVGSKWRLFIPSELAYGDRGAGPKIGPGAALVFDVELLAIE 238          
BLAST of mRNA_P-wetherbeei_contig1777.4.1 vs. uniprot
Match: A0A7V1V404_9BACT (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Nitrospirae bacterium TaxID=2026887 RepID=A0A7V1V404_9BACT)

HSP 1 Score: 150 bits (379), Expect = 2.350e-43
Identity = 75/123 (60.98%), Postives = 90/123 (73.17%), Query Frame = 1
Query:    1 AGAAFLAAEANKDGAVQTPSGLVIHTTKKGQGPSPSLRDTVRVHYHGTLIDGTVFDSSVERGKPISFALNQVIVGWQEGLRSMKTGGTSRLVIPSELAYGDRGAGRAVPPGSVLVFDVQLLAV 369
            AGAAFLA  A + GA +T SGLV+ T K G G +P   D V+VHYHGTL DGTVFDSSV+RG+P +F L QVI  W EGL+ MK GG SRLV P+ LAYGDRGA   + PG+ LVF+V+LL +
Sbjct:   92 AGAAFLAKAAAEPGATKTASGLVVKTIKPGSGEAPKATDKVKVHYHGTLTDGTVFDSSVQRGEPATFPLRQVIPCWTEGLQLMKVGGKSRLVCPANLAYGDRGAPPQIKPGATLVFEVELLDI 214          
BLAST of mRNA_P-wetherbeei_contig1777.4.1 vs. uniprot
Match: A0A0S4L1D4_9BACT (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Candidatus Nitrospira inopinata TaxID=1715989 RepID=A0A0S4L1D4_9BACT)

HSP 1 Score: 150 bits (379), Expect = 2.630e-43
Identity = 73/123 (59.35%), Postives = 93/123 (75.61%), Query Frame = 1
Query:    1 AGAAFLAAEANKDGAVQTPSGLVIHTTKKGQGPSPSLRDTVRVHYHGTLIDGTVFDSSVERGKPISFALNQVIVGWQEGLRSMKTGGTSRLVIPSELAYGDRGAGRAVPPGSVLVFDVQLLAV 369
            AGAAFLA  A++ G+V+T SG VI   K G G +P   DTV+VHYHGTLIDGTVFDSSV+RG+P +F L+QVI  W EG++ +K GG SRL+ PS LAYGDRG+   + PG+ LVF+V+LL +
Sbjct:  100 AGAAFLAKAASEKGSVKTESGAVITPIKLGSGATPKSTDTVKVHYHGTLIDGTVFDSSVKRGEPATFPLDQVITCWTEGVQQIKVGGKSRLICPSNLAYGDRGSPPVIKPGATLVFEVELLEI 222          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1777.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1TWN3_9STRA1.710e-4659.68Peptidylprolyl isomerase n=1 Tax=Phaeomonas parva ... [more]
A0A2E7JVB0_9BACT1.360e-4460.16Peptidyl-prolyl cis-trans isomerase n=1 Tax=Gemmat... [more]
A0A2P8HN88_9BACT3.860e-4460.48Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chitin... [more]
UPI001B07F6F41.020e-4360.48FKBP-type peptidyl-prolyl cis-trans isomerase n=2 ... [more]
A0A2E9MGZ0_9BACT1.230e-4360.83Peptidyl-prolyl cis-trans isomerase n=3 Tax=FCB gr... [more]
A0A1H4C347_9BACT1.330e-4359.35Peptidyl-prolyl cis-trans isomerase n=2 Tax=Chitin... [more]
A0A7V4CYN4_9BACT1.760e-4360.66Peptidyl-prolyl cis-trans isomerase n=1 Tax=Candid... [more]
A0A561PGB1_9BACT1.940e-4360.48Peptidyl-prolyl cis-trans isomerase n=3 Tax=Chitin... [more]
A0A7V1V404_9BACT2.350e-4360.98Peptidyl-prolyl cis-trans isomerase n=1 Tax=Nitros... [more]
A0A0S4L1D4_9BACT2.630e-4359.35Peptidyl-prolyl cis-trans isomerase n=1 Tax=Candid... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1777contigP-wetherbeei_contig1777:4012..4519 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FR20
PFAMsFKBP_C,FKBP_N
Model size375
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue3.35e-43
EggNOG OGsCOG0545@1|root,KOG0543@2759|Eukaryota
DescriptionFK506 binding
Cds size375
COG categoryO
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186126.3457246-CDS-P-wetherbeei_contig1777:4011..41491683186126.3457246-CDS-P-wetherbeei_contig1777:4011..4149Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1777 4012..4149 +
1683186126.3599854-CDS-P-wetherbeei_contig1777:4282..45191683186126.3599854-CDS-P-wetherbeei_contig1777:4282..4519Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1777 4283..4519 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1777.4.1prot_P-wetherbeei_contig1777.4.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1777 4012..4519 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1777.4.1

>prot_P-wetherbeei_contig1777.4.1 ID=prot_P-wetherbeei_contig1777.4.1|Name=mRNA_P-wetherbeei_contig1777.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=125bp
AGAAFLAAEANKDGAVQTPSGLVIHTTKKGQGPSPSLRDTVRVHYHGTLI
DGTVFDSSVERGKPISFALNQVIVGWQEGLRSMKTGGTSRLVIPSELAYG
DRGAGRAVPPGSVLVFDVQLLAVE*
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mRNA from alignment at P-wetherbeei_contig1777:4012..4519+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1777.4.1 ID=mRNA_P-wetherbeei_contig1777.4.1|Name=mRNA_P-wetherbeei_contig1777.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=508bp|location=Sequence derived from alignment at P-wetherbeei_contig1777:4012..4519+ (Phaeothamnion wetherbeei SAG_119_79)
GCGGGAGCCGCTTTTCTTGCGGCGGAAGCAAATAAAGACGGCGCAGTGCA GACACCATCGGGACTTGTAATACACACGACGAAGAAAGGGCAGGGCCCGT CGCCATCTCTGAGAGATACCGTTCGTGTGCATTACCATGTGAGCGGGAAA ACGATTCTTCAGCTCCTCCCCATTGTTCCCCAGTGTGTGCGGTTCGTTTC CTTGGGGTAGGTGCTTGTTTTCTCCAACGTCAACCTCCTGATGCAACATA CTCCTTTTCTTCCCACCGCAGGGCACGCTGATCGACGGCACGGTCTTCGA CAGCAGCGTGGAGCGCGGAAAGCCCATCAGCTTCGCACTGAACCAGGTCA TCGTGGGGTGGCAGGAGGGGCTTCGCTCTATGAAGACGGGCGGCACGTCC AGACTCGTCATCCCTTCGGAGCTCGCCTACGGCGACCGCGGGGCTGGCAG GGCGGTGCCGCCAGGATCGGTGTTGGTTTTCGACGTCCAACTTCTCGCTG TCGAGTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1777:4012..4519+

>mRNA_P-wetherbeei_contig1777.4.1 ID=mRNA_P-wetherbeei_contig1777.4.1|Name=mRNA_P-wetherbeei_contig1777.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=375bp|location=Sequence derived from alignment at P-wetherbeei_contig1777:4012..4519+ (Phaeothamnion wetherbeei SAG_119_79)
GCGGGAGCCGCTTTTCTTGCGGCGGAAGCAAATAAAGACGGCGCAGTGCA
GACACCATCGGGACTTGTAATACACACGACGAAGAAAGGGCAGGGCCCGT
CGCCATCTCTGAGAGATACCGTTCGTGTGCATTACCATGGCACGCTGATC
GACGGCACGGTCTTCGACAGCAGCGTGGAGCGCGGAAAGCCCATCAGCTT
CGCACTGAACCAGGTCATCGTGGGGTGGCAGGAGGGGCTTCGCTCTATGA
AGACGGGCGGCACGTCCAGACTCGTCATCCCTTCGGAGCTCGCCTACGGC
GACCGCGGGGCTGGCAGGGCGGTGCCGCCAGGATCGGTGTTGGTTTTCGA
CGTCCAACTTCTCGCTGTCGAGTAG
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