prot_P-wetherbeei_contig17732.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig17732.1.1
Unique Nameprot_P-wetherbeei_contig17732.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length92
Homology
BLAST of mRNA_P-wetherbeei_contig17732.1.1 vs. uniprot
Match: D7FQC9_ECTSI (SMC_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQC9_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 4.710e-19
Identity = 49/83 (59.04%), Postives = 59/83 (71.08%), Query Frame = 0
Query:    6 LSGGQQALLGLSFVVALSSSAASPLYIFDEVDAALDLSKQDAVARLIGDTFAGSQVLCVSHHAAFHRLAGQMLPIAMGENGSQ 88
            LSGGQQALLGL+ V+ALSS  A PL + DEVDAALD + Q A ARL+  TF   Q LCVSHHA FHR +G  +P+ M +  S+
Sbjct: 1081 LSGGQQALLGLALVLALSSYQAPPLCLLDEVDAALDETNQAAAARLVALTFREGQALCVSHHADFHRQSGHCVPVEMRDGVSR 1163          
BLAST of mRNA_P-wetherbeei_contig17732.1.1 vs. uniprot
Match: A0A836CK59_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK59_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 8.830e-19
Identity = 49/85 (57.65%), Postives = 62/85 (72.94%), Query Frame = 0
Query:    6 LSGGQQALLGLSFVVALSSSAASPLYIFDEVDAALDLSKQDAVARLIGDTFAGSQVLCVSHHAAFHRLAGQMLPIAMGENGSQYV 90
            LSGGQQ+LLGL+FV ALS+  A+PLY+ DEVDAALD + Q  VA L+   F G+QVLCVSHHAA   LA + + +AM +  S+ V
Sbjct: 1216 LSGGQQSLLGLAFVFALSAYHAAPLYLLDEVDAALDAANQRRVAALLPRAFRGAQVLCVSHHAATQALATRRVRVAMEKGSSRIV 1300          
BLAST of mRNA_P-wetherbeei_contig17732.1.1 vs. uniprot
Match: A0A6H5JDH3_9PHAE (SMC_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDH3_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 5.550e-18
Identity = 48/83 (57.83%), Postives = 58/83 (69.88%), Query Frame = 0
Query:    6 LSGGQQALLGLSFVVALSSSAASPLYIFDEVDAALDLSKQDAVARLIGDTFAGSQVLCVSHHAAFHRLAGQMLPIAMGENGSQ 88
            LSGGQQALLGL+ V+ALSS  A PL + DEVDAALD + Q A ARL+  TF   Q LCVSHHA FHR +G  + + M +  S+
Sbjct:  600 LSGGQQALLGLALVLALSSYQAPPLCLLDEVDAALDETNQAAAARLVALTFREGQALCVSHHADFHRQSGHCVAVEMRDGVSR 682          
BLAST of mRNA_P-wetherbeei_contig17732.1.1 vs. uniprot
Match: A0A8K1CQV8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CQV8_PYTOL)

HSP 1 Score: 78.6 bits (192), Expect = 5.370e-15
Identity = 39/75 (52.00%), Postives = 54/75 (72.00%), Query Frame = 0
Query:    6 LSGGQQALLGLSFVVALSSSAASPLYIFDEVDAALDLSKQDAVARLIGDTFAGSQVLCVSHHAAFHRLAGQMLPI 80
            LSGGQ  +LG+++V AL+  +ASPLYI DE+DAALD   Q  V  L+ + F+ SQV+C+SHH AFH  A Q++ +
Sbjct: 1046 LSGGQLTMLGMAYVFALARYSASPLYILDEIDAALDEHNQRLVVELVLEYFSHSQVICISHHEAFHARAHQLIQV 1120          
BLAST of mRNA_P-wetherbeei_contig17732.1.1 vs. uniprot
Match: A0A024GMI1_9STRA (SMC_N domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GMI1_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.870e-14
Identity = 40/75 (53.33%), Postives = 51/75 (68.00%), Query Frame = 0
Query:    6 LSGGQQALLGLSFVVALSSSAASPLYIFDEVDAALDLSKQDAVARLIGDTFAGSQVLCVSHHAAFHRLAGQMLPI 80
            LSGGQ ALLG+S++ AL+S +A PL I DE+DAALD   Q+ VA L    F   QV+CVSHH A H  A Q++ +
Sbjct: 1225 LSGGQLALLGMSYIFALASCSAIPLCILDEIDAALDEQNQENVAALAASNFRSIQVICVSHHKAMHNKAQQLIQV 1299          
BLAST of mRNA_P-wetherbeei_contig17732.1.1 vs. uniprot
Match: A0A1V9ZMH3_9STRA (SMC_N domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZMH3_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 6.480e-14
Identity = 40/75 (53.33%), Postives = 51/75 (68.00%), Query Frame = 0
Query:    6 LSGGQQALLGLSFVVALSSSAASPLYIFDEVDAALDLSKQDAVARLIGDTFAGSQVLCVSHHAAFHRLAGQMLPI 80
            LSGGQ  LLGL+FV AL+  +ASP+Y+ DE+DAALD   Q AVA L+   F  SQV C+SHH + H  A  +L +
Sbjct:  994 LSGGQLTLLGLAFVFALAQYSASPVYVLDEIDAALDEPNQRAVADLVWRIFGQSQVFCISHHESVHAKATTLLRV 1068          
BLAST of mRNA_P-wetherbeei_contig17732.1.1 vs. uniprot
Match: T0QA93_SAPDV (SMC_N domain-containing protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QA93_SAPDV)

HSP 1 Score: 73.9 bits (180), Expect = 2.250e-13
Identity = 44/85 (51.76%), Postives = 54/85 (63.53%), Query Frame = 0
Query:    6 LSGGQQALLGLSFVVALSSSAASPLYIFDEVDAALDLSKQDAVARLIGDTFAGSQVLCVSHHAAFHRLAGQMLPIAMGENGSQYV 90
            LSGGQ  LLGL++V AL+  +ASPLYI DE+DAALD   Q  VA LI   F  SQV C+SHH + H  A  +L +   +  S YV
Sbjct: 1022 LSGGQLTLLGLAYVFALAHYSASPLYILDEIDAALDEHNQLVVADLIWAHFGQSQVFCISHHESVHAKATTLLKVRK-DAASTYV 1105          
BLAST of mRNA_P-wetherbeei_contig17732.1.1 vs. uniprot
Match: F0WC70_9STRA (Chromosome segregation protein Smc putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WC70_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 3.520e-12
Identity = 38/77 (49.35%), Postives = 51/77 (66.23%), Query Frame = 0
Query:    6 LSGGQQALLGLSFVVALSSSAASPLYIFDEVDAALDLSKQDAVARLIGDTFAGSQVLCVSHHAAFHRLAGQMLPIAM 82
            +SGGQ ALLG+S++ AL+S +ASPL I DE+DAALD   Q  +A L    F+  QV+CVSHH       G  +P+A+
Sbjct:  406 MSGGQLALLGMSYIFALASCSASPLCILDEIDAALDEQNQAIIASLAASNFSSIQVICVSHHKV-----GGSIPVAV 477          
BLAST of mRNA_P-wetherbeei_contig17732.1.1 vs. uniprot
Match: A0A146KGA8_9EUKA (SMC multi domain protein (Fragment) n=1 Tax=Trepomonas sp. PC1 TaxID=1076344 RepID=A0A146KGA8_9EUKA)

HSP 1 Score: 65.1 bits (157), Expect = 2.940e-10
Identity = 38/86 (44.19%), Postives = 51/86 (59.30%), Query Frame = 0
Query:    3 LASLSGGQQALLGLSFVVALSSSAASPLYIFDEVDAALDLSKQDAVARLIGDTFAGSQVLCVSHHAAFHRLAGQMLPIAMGENGSQ 88
            L+ LSGGQ++LL LSF +AL     SP+YI DE+DAALDLS   ++ RLI   F GSQ + VS        A Q+  +   +  S+
Sbjct: 1156 LSGLSGGQKSLLALSFTLALLECRPSPIYILDEIDAALDLSHTHSIGRLIQQEFKGSQFIIVSLKEGMFNHANQLFRVKFQDGMSK 1241          
BLAST of mRNA_P-wetherbeei_contig17732.1.1 vs. uniprot
Match: A2EKI4_TRIVA (SMC flexible hinge domain protein, putative n=1 Tax=Trichomonas vaginalis TaxID=5722 RepID=A2EKI4_TRIVA)

HSP 1 Score: 61.6 bits (148), Expect = 4.860e-9
Identity = 33/69 (47.83%), Postives = 44/69 (63.77%), Query Frame = 0
Query:    6 LSGGQQALLGLSFVVALSSSAASPLYIFDEVDAALDLSKQDAVARLIGDTFAGSQVLCVSHHAAFHRLA 74
            LSGGQ+AL+ L  V+AL     +P+YI DEVDAALDLS+   + RL+   F  SQ + VSH    ++ A
Sbjct: 1079 LSGGQRALIALGLVLALLKFNPAPIYILDEVDAALDLSRTQDIGRLLKSQFKASQFIVVSHKEGLYKYA 1147          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17732.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQC9_ECTSI4.710e-1959.04SMC_N domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A836CK59_9STRA8.830e-1957.65P-loop containing nucleoside triphosphate hydrolas... [more]
A0A6H5JDH3_9PHAE5.550e-1857.83SMC_N domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A8K1CQV8_PYTOL5.370e-1552.00Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024GMI1_9STRA1.870e-1453.33SMC_N domain-containing protein n=1 Tax=Albugo can... [more]
A0A1V9ZMH3_9STRA6.480e-1453.33SMC_N domain-containing protein n=1 Tax=Achlya hyp... [more]
T0QA93_SAPDV2.250e-1351.76SMC_N domain-containing protein n=2 Tax=Saprolegni... [more]
F0WC70_9STRA3.520e-1249.35Chromosome segregation protein Smc putative n=1 Ta... [more]
A0A146KGA8_9EUKA2.940e-1044.19SMC multi domain protein (Fragment) n=1 Tax=Trepom... [more]
A2EKI4_TRIVA4.860e-947.83SMC flexible hinge domain protein, putative n=1 Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003395RecF/RecN/SMC, N-terminalPFAMPF02463SMC_Ncoord: 5..86
e-value: 2.6E-19
score: 69.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..91
e-value: 1.5E-21
score: 78.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 3..87
NoneNo IPR availablePANTHERPTHR43941STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 2coord: 2..88
NoneNo IPR availablePANTHERPTHR43941:SF1STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 2coord: 2..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17732contigP-wetherbeei_contig17732:52..590 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17732.1.1mRNA_P-wetherbeei_contig17732.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig17732 52..590 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig17732.1.1 ID=prot_P-wetherbeei_contig17732.1.1|Name=mRNA_P-wetherbeei_contig17732.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=92bp
MELASLSGGQQALLGLSFVVALSSSAASPLYIFDEVDAALDLSKQDAVAR
LIGDTFAGSQVLCVSHHAAFHRLAGQMLPIAMGENGSQYVG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003395RecF/RecN/SMC_N
IPR027417P-loop_NTPase