mRNA_P-wetherbeei_contig17717.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17717.2.1
Unique NamemRNA_P-wetherbeei_contig17717.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17717.2.1 vs. uniprot
Match: A0A353LMK0_9PROT (3-oxoacyl-ACP reductase n=3 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A353LMK0_9PROT)

HSP 1 Score: 409 bits (1050), Expect = 4.090e-142
Identity = 212/243 (87.24%), Postives = 230/243 (94.65%), Query Frame = 1
Query:    1 MTIRFDGKVAIITGAGNGLGRSHALQLAKLGAKVVVNDLGGSVDGTGGSSAAAEKVVAEIKAAGGQAIANGSSITDKKGVELLVKQAMDAYGRIDLLVNNAGILRDKSFSKMSLEDFQLIVDVHLMGAVYVTKAVWPIMLEQNYGRIVMVTSGSGLFGNFGQTNYAAAKLGQVGLMNALKQEGRKYNIKVNTLAPIAATRMTESIMPPQALEALKPELVTPAVLFMLSEDAPTGAIITAGAGF 729
            MTIRFDGKVAI+TGAGNGLGRSHALQLA LGAKVVVNDLGG+VDGTGGSS +AE+VVAEIKAAGG AIANGSS++D  GV+ LVKQ M+A+GRIDLLVNNAGILRDK+F+KMS+EDF ++VDVHL GA YVT+AVWPIM EQNYGRIVM TSGSGL+GNFGQTNYAAAKLGQVGLMN+LKQEGRKYNIKVNTLAPIAATRMTES+MPPQAL ALKPELVTPAVLFMLSEDAPTGAIITAGAGF
Sbjct:    1 MTIRFDGKVAIVTGAGNGLGRSHALQLASLGAKVVVNDLGGNVDGTGGSSESAEQVVAEIKAAGGDAIANGSSVSDVTGVDNLVKQTMEAFGRIDLLVNNAGILRDKTFAKMSVEDFDIVVDVHLSGAAYVTRAVWPIMQEQNYGRIVMTTSGSGLYGNFGQTNYAAAKLGQVGLMNSLKQEGRKYNIKVNTLAPIAATRMTESLMPPQALAALKPELVTPAVLFMLSEDAPTGAIITAGAGF 243          
BLAST of mRNA_P-wetherbeei_contig17717.2.1 vs. uniprot
Match: A0A2D8TU30_9PROT (3-oxoacyl-ACP reductase n=1 Tax=Pelagibacteraceae bacterium TaxID=2026775 RepID=A0A2D8TU30_9PROT)

HSP 1 Score: 352 bits (904), Expect = 6.230e-120
Identity = 179/243 (73.66%), Postives = 214/243 (88.07%), Query Frame = 1
Query:    1 MTIRFDGKVAIITGAGNGLGRSHALQLAKLGAKVVVNDLGGSVDGTGGSSAAAEKVVAEIKAAGGQAIANGSSITDKKGVELLVKQAMDAYGRIDLLVNNAGILRDKSFSKMSLEDFQLIVDVHLMGAVYVTKAVWPIMLEQNYGRIVMVTSGSGLFGNFGQTNYAAAKLGQVGLMNALKQEGRKYNIKVNTLAPIAATRMTESI-MPPQALEALKPELVTPAVLFMLSEDAPTGAIITAGAG 726
            MTI FD KVAI+TGAG GLGRSHALQLA+ GAKVVVNDLGG+VDGTGGSS AA+KVV EIKAAGG+AI+NGSS+TDK GV  LV+  M A+GRID+L+NNAG+LRDKSF+K++L+DF+ +VDVHLMG+VY TKAVWPIM+EQNYGRIVM +S SG+FGNFGQ+NY AAK+G VGLMN LK EG+KYNIKVN+L P+AATRMTE++ MP    E+LKPE V+PAV+FM SE+AP GA+I+AGAG
Sbjct:    1 MTINFDNKVAIVTGAGGGLGRSHALQLAERGAKVVVNDLGGNVDGTGGSSEAADKVVEEIKAAGGEAISNGSSVTDKSGVNKLVEDTMSAFGRIDILINNAGVLRDKSFAKVTLDDFEFVVDVHLMGSVYCTKAVWPIMVEQNYGRIVMTSSSSGIFGNFGQSNYGAAKMGVVGLMNTLKIEGKKYNIKVNSLVPVAATRMTENLGMPDAVFESLKPETVSPAVIFMSSENAPDGAMISAGAG 243          
BLAST of mRNA_P-wetherbeei_contig17717.2.1 vs. uniprot
Match: A0A3B9YYG2_9PROT (3-oxoacyl-ACP reductase n=3 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3B9YYG2_9PROT)

HSP 1 Score: 345 bits (885), Expect = 4.820e-117
Identity = 176/242 (72.73%), Postives = 205/242 (84.71%), Query Frame = 1
Query:    1 MTIRFDGKVAIITGAGNGLGRSHALQLAKLGAKVVVNDLGGSVDGTGGSSAAAEKVVAEIKAAGGQAIANGSSITDKKGVELLVKQAMDAYGRIDLLVNNAGILRDKSFSKMSLEDFQLIVDVHLMGAVYVTKAVWPIMLEQNYGRIVMVTSGSGLFGNFGQTNYAAAKLGQVGLMNALKQEGRKYNIKVNTLAPIAATRMTESIMPPQALEALKPELVTPAVLFMLSEDAPTGAIITAGAG 726
            M +RFDGKVAI+TGAG GLGR HAL+LA+ GAKVVVNDLGG+VDG+GGSS AAE+VV EIKA GG AIANGSS+TD  GV  LVKQ ++AYGRID+L+NNAG+LRDKSF+KM L+DF  +VDVHLMGAV  +KAVW  M  Q YGRIVM TS SGL+GNFGQTNY AAKLGQ+GLMN LK EG+K NI+VN ++P+AATRMTES+MP QALEALKPE VTP V+++ SEDAP G I+ AGAG
Sbjct:    1 MALRFDGKVAIVTGAGGGLGRCHALELARRGAKVVVNDLGGAVDGSGGSSQAAEQVVGEIKAMGGHAIANGSSVTDDAGVANLVKQTLEAYGRIDVLINNAGVLRDKSFTKMELKDFSFVVDVHLMGAVKCSKAVWDTMKAQQYGRIVMTTSSSGLYGNFGQTNYGAAKLGQIGLMNTLKIEGQKDNIRVNAISPVAATRMTESLMPAQALEALKPEYVTPGVIYLASEDAPNGVILAAGAG 242          
BLAST of mRNA_P-wetherbeei_contig17717.2.1 vs. uniprot
Match: A0A8H9XGB5_9CAUL (SDR family oxidoreductase n=1 Tax=Phenylobacterium sp. TaxID=1871053 RepID=A0A8H9XGB5_9CAUL)

HSP 1 Score: 343 bits (880), Expect = 2.870e-116
Identity = 175/240 (72.92%), Postives = 206/240 (85.83%), Query Frame = 1
Query:    7 IRFDGKVAIITGAGNGLGRSHALQLAKLGAKVVVNDLGGSVDGTGGSSAAAEKVVAEIKAAGGQAIANGSSITDKKGVELLVKQAMDAYGRIDLLVNNAGILRDKSFSKMSLEDFQLIVDVHLMGAVYVTKAVWPIMLEQNYGRIVMVTSGSGLFGNFGQTNYAAAKLGQVGLMNALKQEGRKYNIKVNTLAPIAATRMTESIMPPQALEALKPELVTPAVLFMLSEDAPTGAIITAGAG 726
            IRFDGKVAI+TGAG GLGR HAL+LA+ GAKVVVNDLGGSVDG+GGSSAAA+ VV EIKAAGG+AI+NGSS+TD  GV  +VKQ MD +GRID+LVNNAGILRDK+F+KM + DF+L+V+VHLMG V  TKAVW IM EQNYGRIV  TS SGL+GNFGQ+NY AAKLG +G MN L+ EG+K NI VN +AP+AATRMTE++MPPQ LE LKPE VTP V+++ SE+APTGAI+TAGAG
Sbjct:    4 IRFDGKVAIVTGAGGGLGRQHALELARRGAKVVVNDLGGSVDGSGGSSAAADAVVEEIKAAGGEAISNGSSVTDDAGVANMVKQTMDQWGRIDILVNNAGILRDKTFAKMEMADFELVVNVHLMGTVKPTKAVWEIMREQNYGRIVCTTSSSGLYGNFGQSNYGAAKLGVIGFMNTLRLEGQKNNIHVNAIAPVAATRMTENLMPPQVLERLKPEYVTPGVVYLCSEEAPTGAILTAGAG 243          
BLAST of mRNA_P-wetherbeei_contig17717.2.1 vs. uniprot
Match: A0A081BAZ6_9HYPH (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tepidicaulis marinus TaxID=1333998 RepID=A0A081BAZ6_9HYPH)

HSP 1 Score: 342 bits (876), Expect = 1.160e-115
Identity = 175/242 (72.31%), Postives = 206/242 (85.12%), Query Frame = 1
Query:    1 MTIRFDGKVAIITGAGNGLGRSHALQLAKLGAKVVVNDLGGSVDGTGGSSAAAEKVVAEIKAAGGQAIANGSSITDKKGVELLVKQAMDAYGRIDLLVNNAGILRDKSFSKMSLEDFQLIVDVHLMGAVYVTKAVWPIMLEQNYGRIVMVTSGSGLFGNFGQTNYAAAKLGQVGLMNALKQEGRKYNIKVNTLAPIAATRMTESIMPPQALEALKPELVTPAVLFMLSEDAPTGAIITAGAG 726
            M+IR+DGKVAI+TGAG GLGR HAL+ A+ GAKVVVNDLGGSVDGTGG+S AAEKVVAEIKAAGG+AIANGSS+TD  GVE ++KQ MDA+GRID+LVNNAGILRDKSF+KM L+DF L++DVHLMG+V  TKAVWPIM EQ YGRIV+ +S SGL+GNFGQTNY AAKLG VG +N LK EG+K NI+ N LAP+A TRMT  +MPP+A +   P+ V+PAV+F+ SEDAPTG II AGAG
Sbjct:    1 MSIRYDGKVAIVTGAGGGLGRCHALEFARRGAKVVVNDLGGSVDGTGGNSEAAEKVVAEIKAAGGEAIANGSSVTDDAGVENMIKQTMDAFGRIDILVNNAGILRDKSFAKMDLKDFGLVLDVHLMGSVKPTKAVWPIMKEQGYGRIVVTSSSSGLYGNFGQTNYGAAKLGVVGFINTLKLEGQKDNIRANALAPVAYTRMTSDLMPPEAEQMFTPDSVSPAVMFLTSEDAPTGEIICAGAG 242          
BLAST of mRNA_P-wetherbeei_contig17717.2.1 vs. uniprot
Match: A0A328AUF3_9CAUL (3-oxoacyl-ACP reductase n=2 Tax=Phenylobacterium TaxID=20 RepID=A0A328AUF3_9CAUL)

HSP 1 Score: 340 bits (873), Expect = 3.330e-115
Identity = 175/240 (72.92%), Postives = 203/240 (84.58%), Query Frame = 1
Query:    7 IRFDGKVAIITGAGNGLGRSHALQLAKLGAKVVVNDLGGSVDGTGGSSAAAEKVVAEIKAAGGQAIANGSSITDKKGVELLVKQAMDAYGRIDLLVNNAGILRDKSFSKMSLEDFQLIVDVHLMGAVYVTKAVWPIMLEQNYGRIVMVTSGSGLFGNFGQTNYAAAKLGQVGLMNALKQEGRKYNIKVNTLAPIAATRMTESIMPPQALEALKPELVTPAVLFMLSEDAPTGAIITAGAG 726
            IRFDGKVAI+TGAG GLGR HAL+LA+ GA+V+VNDLGGSVDG+GG S AA KVV EIKAAGG+AIANGSS+TD  GV L+VKQAMDA+GRID+LV NAG+LRDK+FSKM L DF+ ++ VHL+G V   KAVW IM EQNYGRIV+ TS SGL+GNFGQ+NY AAKLG VG MN LK EG+K NI VN +AP+AATRMTE++MPP  LE LKPE VTP V+F+ SEDAPTGAI+TAGAG
Sbjct:    4 IRFDGKVAIVTGAGGGLGRQHALELARRGARVLVNDLGGSVDGSGGGSEAAHKVVDEIKAAGGEAIANGSSVTDDAGVALMVKQAMDAWGRIDILVANAGVLRDKTFSKMELADFEFVLGVHLLGTVKPAKAVWEIMREQNYGRIVVTTSSSGLYGNFGQSNYGAAKLGIVGFMNTLKLEGQKNNIHVNAIAPVAATRMTENLMPPAVLERLKPEFVTPGVVFLCSEDAPTGAILTAGAG 243          
BLAST of mRNA_P-wetherbeei_contig17717.2.1 vs. uniprot
Match: A0A4V1UDE2_9CAUL (SDR family NAD(P)-dependent oxidoreductase n=2 Tax=Caulobacteraceae TaxID=76892 RepID=A0A4V1UDE2_9CAUL)

HSP 1 Score: 340 bits (871), Expect = 6.700e-115
Identity = 171/240 (71.25%), Postives = 206/240 (85.83%), Query Frame = 1
Query:    7 IRFDGKVAIITGAGNGLGRSHALQLAKLGAKVVVNDLGGSVDGTGGSSAAAEKVVAEIKAAGGQAIANGSSITDKKGVELLVKQAMDAYGRIDLLVNNAGILRDKSFSKMSLEDFQLIVDVHLMGAVYVTKAVWPIMLEQNYGRIVMVTSGSGLFGNFGQTNYAAAKLGQVGLMNALKQEGRKYNIKVNTLAPIAATRMTESIMPPQALEALKPELVTPAVLFMLSEDAPTGAIITAGAG 726
            IRFDGKVAI+TGAG GLGR HAL+LA+ GAKV+VNDLGGS+DG+GG S AA KVV EIKA GG+AIANGSS+TD  GV L+VKQAMDA+GRID+L+ NAG+LRDKSFSKM++EDF+ ++ VHL+G V  +KAVW IM EQNYGRIV+ TS SGL+GNFGQ+NY AAKLG +G MN LK EG+K NI VN ++P+AATRMTE +MPP+ LE LKPE VTPAV+++ SE+APTGAI+TAGAG
Sbjct:    4 IRFDGKVAIVTGAGGGLGRQHALELARRGAKVLVNDLGGSMDGSGGGSDAANKVVEEIKALGGEAIANGSSVTDDAGVALMVKQAMDAWGRIDILIANAGVLRDKSFSKMTIEDFEFVLGVHLLGTVKPSKAVWEIMKEQNYGRIVVTTSSSGLYGNFGQSNYGAAKLGIIGFMNTLKLEGQKNNIHVNAISPVAATRMTEGLMPPEVLEKLKPEYVTPAVVYLASEEAPTGAIVTAGAG 243          
BLAST of mRNA_P-wetherbeei_contig17717.2.1 vs. uniprot
Match: A0A5A7MXY7_9PROT (3-oxoacyl-ACP reductase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A5A7MXY7_9PROT)

HSP 1 Score: 340 bits (871), Expect = 7.170e-115
Identity = 175/242 (72.31%), Postives = 199/242 (82.23%), Query Frame = 1
Query:    1 MTIRFDGKVAIITGAGNGLGRSHALQLAKLGAKVVVNDLGGSVDGTGGSSAAAEKVVAEIKAAGGQAIANGSSITDKKGVELLVKQAMDAYGRIDLLVNNAGILRDKSFSKMSLEDFQLIVDVHLMGAVYVTKAVWPIMLEQNYGRIVMVTSGSGLFGNFGQTNYAAAKLGQVGLMNALKQEGRKYNIKVNTLAPIAATRMTESIMPPQALEALKPELVTPAVLFMLSEDAPTGAIITAGAG 726
            M IRFDG+VAI+TGAG GLGRSHAL+ A+ GAKVVVNDLGGSVDG+GGSS AA  VV EIKAAGG+AIANGSS+TD+ GV  LV +AMDA+GRID+LVNNAGILRDKSF+KMS++DFQL+VDVHLMGA     AVWP+M +Q YGRIVM  S SGL+GNFGQTNY AAKLGQ GLMN LK EG K NI  N + PIAATRMTE + PPQ LE  +PELV+PAV+ +  EDAP G II AGAG
Sbjct:    1 MAIRFDGRVAIVTGAGGGLGRSHALEFARRGAKVVVNDLGGSVDGSGGSSDAANAVVEEIKAAGGEAIANGSSVTDRDGVARLVAEAMDAFGRIDILVNNAGILRDKSFAKMSMDDFQLVVDVHLMGAANCAHAVWPVMKQQKYGRIVMTASSSGLYGNFGQTNYGAAKLGQAGLMNTLKLEGAKDNIHTNAIVPIAATRMTEDLFPPQLLELFRPELVSPAVMLLAGEDAPNGEIICAGAG 242          
BLAST of mRNA_P-wetherbeei_contig17717.2.1 vs. uniprot
Match: A0A0Q8MG11_9CAUL (3-oxoacyl-ACP reductase n=10 Tax=Caulobacteraceae TaxID=76892 RepID=A0A0Q8MG11_9CAUL)

HSP 1 Score: 339 bits (870), Expect = 9.500e-115
Identity = 171/240 (71.25%), Postives = 206/240 (85.83%), Query Frame = 1
Query:    7 IRFDGKVAIITGAGNGLGRSHALQLAKLGAKVVVNDLGGSVDGTGGSSAAAEKVVAEIKAAGGQAIANGSSITDKKGVELLVKQAMDAYGRIDLLVNNAGILRDKSFSKMSLEDFQLIVDVHLMGAVYVTKAVWPIMLEQNYGRIVMVTSGSGLFGNFGQTNYAAAKLGQVGLMNALKQEGRKYNIKVNTLAPIAATRMTESIMPPQALEALKPELVTPAVLFMLSEDAPTGAIITAGAG 726
            IRFDGKVAI+TGAG GLGR HAL+LA+ GAKVVVNDLGGSVDG+GGSS AA+ VVAEIKAAGG+AI+NGSS+TD  GV L++KQAMD +GRID+L+ NAGILRDKSFSKM L DF+L+++VHLMG V   KAVW IM EQNYGRIV+ TS SGL+GNFGQ+NY AAKLG +G MN +K EG+K NI +N ++P+AATRMTE++MP + LE LKPE VTP V+++ SE+APTGAI+TAGAG
Sbjct:    4 IRFDGKVAIVTGAGGGLGRQHALELARRGAKVVVNDLGGSVDGSGGSSTAADAVVAEIKAAGGEAISNGSSVTDDAGVALMIKQAMDTWGRIDILIANAGILRDKSFSKMELADFELVLNVHLMGTVKPVKAVWEIMREQNYGRIVVTTSSSGLYGNFGQSNYGAAKLGIIGFMNTIKLEGQKNNIHINAISPVAATRMTENLMPAEVLEKLKPEYVTPGVVYLASEEAPTGAILTAGAG 243          
BLAST of mRNA_P-wetherbeei_contig17717.2.1 vs. uniprot
Match: A0A520TWT0_9GAMM (SDR family oxidoreductase n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A520TWT0_9GAMM)

HSP 1 Score: 338 bits (867), Expect = 2.710e-114
Identity = 171/242 (70.66%), Postives = 206/242 (85.12%), Query Frame = 1
Query:    1 MTIRFDGKVAIITGAGNGLGRSHALQLAKLGAKVVVNDLGGSVDGTGGSSAAAEKVVAEIKAAGGQAIANGSSITDKKGVELLVKQAMDAYGRIDLLVNNAGILRDKSFSKMSLEDFQLIVDVHLMGAVYVTKAVWPIMLEQNYGRIVMVTSGSGLFGNFGQTNYAAAKLGQVGLMNALKQEGRKYNIKVNTLAPIAATRMTESIMPPQALEALKPELVTPAVLFMLSEDAPTGAIITAGAG 726
            M+IRFDGKVAI+TGAG GLGR HAL LA  GAKVVVNDLGG+VDGTGGS +AAEKVV EIK+AGG+AIANG+S+TD K VE +VKQ MD +GR+D+LVNNAGILRDKSFSK++ EDF+L+++VHLMG V  TKAVW IM EQNYGRI++ +S SG++GNFGQTNY AAK+G +GL+N LK EG KYNIK N L P+A TRMTE +MPP+ +E L+PE V+PAV FM+SEDAPTG ++ AGAG
Sbjct:    1 MSIRFDGKVAIVTGAGGGLGRCHALDLASRGAKVVVNDLGGAVDGTGGSVSAAEKVVEEIKSAGGEAIANGASVTDLKQVEEMVKQTMDTWGRVDILVNNAGILRDKSFSKVTDEDFRLVLEVHLMGTVNCTKAVWEIMKEQNYGRILVTSSSSGVYGNFGQTNYGAAKMGVLGLINTLKLEGAKYNIKCNGLTPVAGTRMTEDLMPPEVIEKLQPECVSPAVTFMVSEDAPTGVVMAAGAG 242          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17717.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A353LMK0_9PROT4.090e-14287.243-oxoacyl-ACP reductase n=3 Tax=Alphaproteobacteri... [more]
A0A2D8TU30_9PROT6.230e-12073.663-oxoacyl-ACP reductase n=1 Tax=Pelagibacteraceae ... [more]
A0A3B9YYG2_9PROT4.820e-11772.733-oxoacyl-ACP reductase n=3 Tax=Alphaproteobacteri... [more]
A0A8H9XGB5_9CAUL2.870e-11672.92SDR family oxidoreductase n=1 Tax=Phenylobacterium... [more]
A0A081BAZ6_9HYPH1.160e-11572.31Short-chain dehydrogenase/reductase SDR n=1 Tax=Te... [more]
A0A328AUF3_9CAUL3.330e-11572.923-oxoacyl-ACP reductase n=2 Tax=Phenylobacterium T... [more]
A0A4V1UDE2_9CAUL6.700e-11571.25SDR family NAD(P)-dependent oxidoreductase n=2 Tax... [more]
A0A5A7MXY7_9PROT7.170e-11572.313-oxoacyl-ACP reductase n=2 Tax=Alphaproteobacteri... [more]
A0A0Q8MG11_9CAUL9.500e-11571.253-oxoacyl-ACP reductase n=10 Tax=Caulobacteraceae ... [more]
A0A520TWT0_9GAMM2.710e-11470.66SDR family oxidoreductase n=3 Tax=Proteobacteria T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17717contigP-wetherbeei_contig17717:678..1406 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1333998.M2A_1713
PFAMsadh_short
Model size729
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.91e-116
EggNOG OGsCOG1028@1|root,COG1028@2|Bacteria,1MXNQ@1224|Proteobacteria,2TS6G@28211|Alphaproteobacteria
DescriptionBelongs to the short-chain dehydrogenases reductases (SDR) family
Cds size729
COG categoryIQ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186124.7462916-CDS-P-wetherbeei_contig17717:677..14061683186124.7462916-CDS-P-wetherbeei_contig17717:677..1406Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17717 678..1406 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17717.2.1prot_P-wetherbeei_contig17717.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17717 678..1406 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17717.2.1

>prot_P-wetherbeei_contig17717.2.1 ID=prot_P-wetherbeei_contig17717.2.1|Name=mRNA_P-wetherbeei_contig17717.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=243bp
MTIRFDGKVAIITGAGNGLGRSHALQLAKLGAKVVVNDLGGSVDGTGGSS
AAAEKVVAEIKAAGGQAIANGSSITDKKGVELLVKQAMDAYGRIDLLVNN
AGILRDKSFSKMSLEDFQLIVDVHLMGAVYVTKAVWPIMLEQNYGRIVMV
TSGSGLFGNFGQTNYAAAKLGQVGLMNALKQEGRKYNIKVNTLAPIAATR
MTESIMPPQALEALKPELVTPAVLFMLSEDAPTGAIITAGAGF
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mRNA from alignment at P-wetherbeei_contig17717:678..1406+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17717.2.1 ID=mRNA_P-wetherbeei_contig17717.2.1|Name=mRNA_P-wetherbeei_contig17717.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=729bp|location=Sequence derived from alignment at P-wetherbeei_contig17717:678..1406+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACGATCAGATTTGACGGAAAAGTGGCCATTATTACCGGCGCGGGCAA TGGCCTTGGGCGCTCTCACGCGTTGCAACTGGCCAAACTGGGGGCAAAGG TCGTGGTCAACGATCTGGGCGGCAGTGTTGACGGCACCGGCGGCTCCAGC GCCGCCGCCGAAAAGGTTGTTGCAGAAATCAAGGCGGCGGGCGGGCAGGC CATCGCCAATGGCTCCAGCATCACCGACAAAAAGGGCGTCGAACTGCTGG TCAAGCAGGCCATGGACGCCTATGGCCGCATCGATCTGCTGGTCAACAAT GCCGGTATTCTGCGCGACAAAAGTTTCTCGAAAATGTCGCTGGAAGATTT CCAGCTGATCGTCGATGTGCATCTGATGGGCGCGGTCTATGTGACCAAGG CGGTATGGCCGATCATGCTGGAACAGAATTATGGCCGCATCGTCATGGTT ACGTCCGGCAGCGGGCTGTTTGGCAATTTTGGCCAGACCAATTACGCCGC CGCGAAACTGGGCCAGGTTGGCCTGATGAATGCGCTGAAGCAGGAAGGCC GCAAATATAACATCAAGGTCAACACGCTGGCCCCGATTGCCGCCACGCGC ATGACCGAATCCATCATGCCGCCCCAGGCGCTTGAGGCCCTGAAACCGGA ACTGGTGACCCCCGCCGTGCTGTTCATGCTGAGCGAGGATGCGCCGACGG GCGCCATCATCACTGCGGGCGCAGGCTTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17717:678..1406+

>mRNA_P-wetherbeei_contig17717.2.1 ID=mRNA_P-wetherbeei_contig17717.2.1|Name=mRNA_P-wetherbeei_contig17717.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=729bp|location=Sequence derived from alignment at P-wetherbeei_contig17717:678..1406+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACGATCAGATTTGACGGAAAAGTGGCCATTATTACCGGCGCGGGCAA
TGGCCTTGGGCGCTCTCACGCGTTGCAACTGGCCAAACTGGGGGCAAAGG
TCGTGGTCAACGATCTGGGCGGCAGTGTTGACGGCACCGGCGGCTCCAGC
GCCGCCGCCGAAAAGGTTGTTGCAGAAATCAAGGCGGCGGGCGGGCAGGC
CATCGCCAATGGCTCCAGCATCACCGACAAAAAGGGCGTCGAACTGCTGG
TCAAGCAGGCCATGGACGCCTATGGCCGCATCGATCTGCTGGTCAACAAT
GCCGGTATTCTGCGCGACAAAAGTTTCTCGAAAATGTCGCTGGAAGATTT
CCAGCTGATCGTCGATGTGCATCTGATGGGCGCGGTCTATGTGACCAAGG
CGGTATGGCCGATCATGCTGGAACAGAATTATGGCCGCATCGTCATGGTT
ACGTCCGGCAGCGGGCTGTTTGGCAATTTTGGCCAGACCAATTACGCCGC
CGCGAAACTGGGCCAGGTTGGCCTGATGAATGCGCTGAAGCAGGAAGGCC
GCAAATATAACATCAAGGTCAACACGCTGGCCCCGATTGCCGCCACGCGC
ATGACCGAATCCATCATGCCGCCCCAGGCGCTTGAGGCCCTGAAACCGGA
ACTGGTGACCCCCGCCGTGCTGTTCATGCTGAGCGAGGATGCGCCGACGG
GCGCCATCATCACTGCGGGCGCAGGCTTC
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