mRNA_P-wetherbeei_contig17717.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17717.1.1
Unique NamemRNA_P-wetherbeei_contig17717.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17717.1.1 vs. uniprot
Match: A0A3B9BRA0_9PROT (Glutathione S-transferase n=7 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3B9BRA0_9PROT)

HSP 1 Score: 204 bits (518), Expect = 8.870e-64
Identity = 100/173 (57.80%), Postives = 122/173 (70.52%), Query Frame = 1
Query:    1 MLLYDYRAAPNPRRVRMFLAEKGVTIPTVQINLIKGQHRLADYMAKDPFVLVPLLELDNGKLLGESVSICRYIEELHPTPPLLGRDTEERAFIDMWSRRAEFELLPSIAGVFRHGTEIGKALEPDQIAAWARASKARALRAMQIFDNVLAGRRYVAGPDFSIADITLLCSIDF 519
            M LYD+  APNPRRVR+FLAEKG+T+PT  I+L+KG+HR  +++A DP   VPLL LDNG+ L ESVSICRY E LHPTP L G   EE+AF+DMW RR E EL   IA   RHG  + +ALEP Q+  WA  S ARA  AM   D  LA R ++AG +FS+ADIT +C+ DF
Sbjct:    1 MKLYDHPVAPNPRRVRVFLAEKGITVPTETIDLLKGEHRTPEFLALDPLGRVPLLVLDNGRCLAESVSICRYFEALHPTPCLFGEGAEEQAFVDMWQRRVELELFFPIAHAVRHGIAMFQALEPVQLPQWAELSAARANEAMIWLDKTLAERPFIAGENFSVADITAMCAFDF 173          
BLAST of mRNA_P-wetherbeei_contig17717.1.1 vs. uniprot
Match: A0A352KD43_9PROT (Glutathione S-transferase n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KD43_9PROT)

HSP 1 Score: 190 bits (482), Expect = 2.570e-58
Identity = 93/177 (52.54%), Postives = 120/177 (67.80%), Query Frame = 1
Query:    1 MLLYDYRAAPNPRRVRMFLAEKGVTIPTVQINLIKGQHRLADYMAKDPFVLVPLLELDNGKLLGESVSICRYIEELHPTPPLLGRDTEERAFIDMWSRRAEFELLPSIAGVFRHGTEIGKALEPDQIAAWARASKARALRAMQIFDNVLAGRRYVAGPDFSIADITLLCSIDFGANT 531
            M LY++  A NPRRVRMFLAEKG+ +P V ++L+KG+HR A+++A+DP   +PLLELD+G  L ESV+ICRY + + P PPL GR+  E A I+MW RRAE EL   I+  FRH +   KAL+P Q+A WA   + RA   M   D  LA R Y+AG  FSIADIT  C++  G NT
Sbjct:    1 MKLYNFANATNPRRVRMFLAEKGIEVPMVTVDLMKGEHRTAEFLARDPAGRLPLLELDDGSFLSESVAICRYFDAIQPEPPLFGRNGREIAEIEMWQRRAELELYLPISNAFRHSSPAAKALQPVQVAEWAALCRERAAECMGWIDARLADRDYLAGEMFSIADITAFCALGLGTNT 177          
BLAST of mRNA_P-wetherbeei_contig17717.1.1 vs. uniprot
Match: A0A366FBM3_9HYPH (Glutathione S-transferase n=1 Tax=Roseiarcus fermentans TaxID=1473586 RepID=A0A366FBM3_9HYPH)

HSP 1 Score: 185 bits (469), Expect = 2.340e-56
Identity = 91/173 (52.60%), Postives = 120/173 (69.36%), Query Frame = 1
Query:    1 MLLYDYRAAPNPRRVRMFLAEKGVTIPTVQINLIKGQHRLADYMAKDPFVLVPLLELDNGKLLGESVSICRYIEELHPTPPLLGRDTEERAFIDMWSRRAEFELLPSIAGVFRHGTEIGKALEPDQIAAWARASKARALRAMQIFDNVLAGRRYVAGPDFSIADITLLCSIDF 519
            M LY+   APNPRRVR+FLAEKGV IP ++++L K + +  +Y A +PF ++P LELD G+++GES++ICRYIEELHP P L G    ERA ++MW RR E+ LL  IA  FRH       +E  QI  WA A++ RALR M IFD +LA R +VAG  F++ADIT L ++DF
Sbjct:    1 MKLYNSNFAPNPRRVRVFLAEKGVAIPRIEVDLAKLEQKAPEYSAVNPFQVIPALELDGGEVIGESIAICRYIEELHPEPNLFGATPLERAMVEMWQRRVEWHLLLPIAQAFRHSHPAMTKMEDPQIPDWAAANRTRALRNMMIFDRMLADRPFVAGDRFTVADITGLVALDF 173          
BLAST of mRNA_P-wetherbeei_contig17717.1.1 vs. uniprot
Match: A0A7X3SA37_9HYPH (Glutathione S-transferase n=1 Tax=Stappia sp. GBMRC 2046 TaxID=2692190 RepID=A0A7X3SA37_9HYPH)

HSP 1 Score: 182 bits (462), Expect = 2.690e-55
Identity = 85/173 (49.13%), Postives = 119/173 (68.79%), Query Frame = 1
Query:    1 MLLYDYRAAPNPRRVRMFLAEKGVTIPTVQINLIKGQHRLADYMAKDPFVLVPLLELDNGKLLGESVSICRYIEELHPTPPLLGRDTEERAFIDMWSRRAEFELLPSIAGVFRHGTEIGKALEPDQIAAWARASKARALRAMQIFDNVLAGRRYVAGPDFSIADITLLCSIDF 519
            M LYD   APNPRRVR+FLAEKG+ +PT Q++++    +   +   +P   VP+LELD+G  + ESV+ICRY EE+HP PPL+GR+  E+A ++MW+RRAEF +   +A  FRH       LE  Q+  WA A++ + L A + FD VL+ R+++AG  FSIADITLLC++DF
Sbjct:    1 MKLYDTAGAPNPRRVRIFLAEKGIQVPTEQVDIMSKMAKTDAFTTLNPLQRVPVLELDDGTAISESVAICRYFEEMHPEPPLMGRNAVEKAQVEMWNRRAEFGVFAPVAFAFRHSHPAMSELEVPQVREWAEANRPKVLEAFRFFDQVLSDRQFLAGEMFSIADITLLCAVDF 173          
BLAST of mRNA_P-wetherbeei_contig17717.1.1 vs. uniprot
Match: A0A533IVL5_9BRAD (Glutathione S-transferase family protein n=1 Tax=Bradyrhizobium icense TaxID=1274631 RepID=A0A533IVL5_9BRAD)

HSP 1 Score: 179 bits (453), Expect = 6.030e-54
Identity = 92/177 (51.98%), Postives = 121/177 (68.36%), Query Frame = 1
Query:    1 MLLYDYRAAPNPRRVRMFLAEKGVTIPTVQINLIKGQHRLADYMAKDPFVLVPLLELDNGKLLGESVSICRYIEELHPTPPLLGRDTEERAFIDMWSRRAEFELLPSIAGVFRHGTEIGKALEPDQIAAWARASKARALRAMQIFDNVLAGRRYVAGPDFSIADITLLCSIDFGANT 531
            M LYD +A  NPRRVR+FL+EKGV IP V+++++KG++R  D++AK+P   +P+LELD+G  L ESV+ICRYIEELHP PPL+G +  ERA ++MW+RRAE ELL  I   F H +    A   +QI A   AS+  AL  M   D  LAGR Y+AG  ++IADIT  C+   G NT
Sbjct:    1 MKLYDLKAGTNPRRVRIFLSEKGVDIPKVEVDMLKGENRSEDFLAKNPMGTMPVLELDDGTFLSESVAICRYIEELHPDPPLMGTNARERALVEMWNRRAELELLRPITDAFVHLSPFW-AGRREQIPATGEASRQAALSRMAWLDAELAGRPYLAGDAYTIADITAQCACVLGKNT 176          
BLAST of mRNA_P-wetherbeei_contig17717.1.1 vs. uniprot
Match: A0A1Z9BMN2_9BACT (Glutathione S-transferase n=2 Tax=Bacteria TaxID=2 RepID=A0A1Z9BMN2_9BACT)

HSP 1 Score: 179 bits (453), Expect = 6.030e-54
Identity = 87/175 (49.71%), Postives = 117/175 (66.86%), Query Frame = 1
Query:    1 MLLYDYRAAPNPRRVRMFLAEKGVTIPTVQINLIKGQHRLADYMAKDPFVLVPLLELDNGKLLGESVSICRYIEELHPTPPLLGRDTEERAFIDMWSRRAEFELLPSIAGVFRHGTEIGKALEPDQIAAWARASKARALRAMQIFDNVLAGRRYVAGPDFSIADITLLCSIDFGA 525
            M L D   APNPRRVR+FLAEKG+ +P  Q+++   ++R A++ AK+P V VP+LELD+G+ L E+V+ICRY E LHP PPL+G D  +  F++MW+RR EFEL+ +I G FRH     K     Q+  W  A +  AL  +   D  L+ R ++AG  FSIADIT LC+IDFGA
Sbjct:    1 MKLLDSTMAPNPRRVRIFLAEKGIEVPVEQVDIGASENRTAEFAAKNPMVNVPVLELDDGRYLSETVAICRYFEGLHPNPPLMGVDATDAGFVEMWNRRMEFELMNNITGPFRHSHGFFKG-RITQVPEWGEACRVAALERLAWLDGELSDREFIAGDRFSIADITALCAIDFGA 174          
BLAST of mRNA_P-wetherbeei_contig17717.1.1 vs. uniprot
Match: A0A2S6NBM2_9HYPH (Glutathione S-transferase n=2 Tax=Rhodoblastus sphagnicola TaxID=333368 RepID=A0A2S6NBM2_9HYPH)

HSP 1 Score: 178 bits (452), Expect = 8.810e-54
Identity = 92/173 (53.18%), Postives = 117/173 (67.63%), Query Frame = 1
Query:    1 MLLYDYRAAPNPRRVRMFLAEKGVTIPTVQINLIKGQHRLADYMAKDPFVLVPLLELDNGKLLGESVSICRYIEELHPTPPLLGRDTEERAFIDMWSRRAEFELLPSIAGVFRHGTEIGKALEPDQIAAWARASKARALRAMQIFDNVLAGRRYVAGPDFSIADITLLCSIDF 519
            M LYD   APNPRRVR+FLAEKGV++P V ++L + + + A++ A +P    P LELD+G++L ESV+ICRY EEL+P PPL GRD  ERA ++MW RR EFE L  I   FRH     + +E  QIA WA A+K RA R  +  D  LA RRY+AG  F+IADIT L + DF
Sbjct:    1 MKLYDSPHAPNPRRVRIFLAEKGVSLPMVSVDLGRLEQKGAEFSAVNPLRRTPALELDSGEILTESVAICRYFEELYPQPPLFGRDALERARVEMWQRRIEFEFLAPIIHAFRHSHPAMREMEQPQIAEWAEANKPRAERFARFLDAELAQRRYIAGDVFTIADITALVAADF 173          
BLAST of mRNA_P-wetherbeei_contig17717.1.1 vs. uniprot
Match: UPI001561501E (glutathione S-transferase n=1 Tax=Hongsoonwoonella zoysiae TaxID=2821844 RepID=UPI001561501E)

HSP 1 Score: 178 bits (452), Expect = 8.810e-54
Identity = 86/173 (49.71%), Postives = 119/173 (68.79%), Query Frame = 1
Query:    1 MLLYDYRAAPNPRRVRMFLAEKGVTIPTVQINLIKGQHRLADYMAKDPFVLVPLLELDNGKLLGESVSICRYIEELHPTPPLLGRDTEERAFIDMWSRRAEFELLPSIAGVFRHGTEIGKALEPDQIAAWARASKARALRAMQIFDNVLAGRRYVAGPDFSIADITLLCSIDF 519
            M LYD   APNPRRVR+FLAEKG+ +PT Q++++    +   + A +P   VP+LELD+G ++ ESV+ICRY EE+ P PPL+GR+  E+A ++MW+RR E  +  ++A  FRH       LE  Q+  WA A++ +AL AM+  D VLA R +VAG  FSIADITLLC++DF
Sbjct:    1 MKLYDTARAPNPRRVRIFLAEKGIQVPTEQVDIMGKMAKSDAFTALNPLQRVPVLELDDGTVITESVAICRYFEEIQPEPPLMGRNAVEKAQVEMWNRRVELGVFAAVANAFRHAHPAMSGLEVPQVKEWADANRPKALEAMKFLDRVLADRPFVAGELFSIADITLLCALDF 173          
BLAST of mRNA_P-wetherbeei_contig17717.1.1 vs. uniprot
Match: A0A345ZUP4_9HYPH (Glutathione S-transferase n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A345ZUP4_9HYPH)

HSP 1 Score: 178 bits (451), Expect = 1.250e-53
Identity = 85/173 (49.13%), Postives = 118/173 (68.21%), Query Frame = 1
Query:    1 MLLYDYRAAPNPRRVRMFLAEKGVTIPTVQINLIKGQHRLADYMAKDPFVLVPLLELDNGKLLGESVSICRYIEELHPTPPLLGRDTEERAFIDMWSRRAEFELLPSIAGVFRHGTEIGKALEPDQIAAWARASKARALRAMQIFDNVLAGRRYVAGPDFSIADITLLCSIDF 519
            M LYD + APNPRR R+FLAEKG+++PT Q++++K +H+  +Y A +P   +P L LD+G ++ ES++ICRY E L P PPL G   +E A ++MW+RRAE  LL S+A VFRH     K LE  Q+  WA A+K R +  +++ D  L  R +VAG  FS+ADIT LC+IDF
Sbjct:    1 MKLYDSKTAPNPRRTRIFLAEKGISVPTEQVDMMKMEHKTPEYTALNPLQRMPALVLDDGTIITESIAICRYFEVLQPEPPLFGVGAKEIAMVEMWNRRAELNLLFSVANVFRHSHPAMKELEVPQVPDWAEANKPRIVDFLRMLDAELKNRAFVAGDRFSVADITTLCAIDF 173          
BLAST of mRNA_P-wetherbeei_contig17717.1.1 vs. uniprot
Match: A0A5B2VBW0_9HYPH (Glutathione S-transferase n=1 Tax=Salinarimonas soli TaxID=1638099 RepID=A0A5B2VBW0_9HYPH)

HSP 1 Score: 176 bits (447), Expect = 5.040e-53
Identity = 89/173 (51.45%), Postives = 116/173 (67.05%), Query Frame = 1
Query:    1 MLLYDYRAAPNPRRVRMFLAEKGVTIPTVQINLIKGQHRLADYMAKDPFVLVPLLELDNGKLLGESVSICRYIEELHPTPPLLGRDTEERAFIDMWSRRAEFELLPSIAGVFRHGTEIGKALEPDQIAAWARASKARALRAMQIFDNVLAGRRYVAGPDFSIADITLLCSIDF 519
            M L+D   APNPRRVR+FLAEKGVTIP V +++ +G H+   + A +PF   P+LELD+G  + ESV+ICRY+EELHP P L G D  ERA ++MW RR EF LL +IA VFRH        E  Q+AAW  A++ +    ++I D  LA + +VAG  FSIADIT L ++DF
Sbjct:    1 MKLHDSGRAPNPRRVRIFLAEKGVTIPLVPVDIGRGDHKSPAFTALNPFQRSPVLELDDGTAIAESVAICRYVEELHPAPALFGTDARERAIVEMWQRRLEFGLLAAIAAVFRHLHPAMAEWEVPQVAAWGEANRPKVEETLRILDAHLADKPFVAGERFSIADITGLVALDF 173          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17717.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3B9BRA0_9PROT8.870e-6457.80Glutathione S-transferase n=7 Tax=Alphaproteobacte... [more]
A0A352KD43_9PROT2.570e-5852.54Glutathione S-transferase n=2 Tax=Alphaproteobacte... [more]
A0A366FBM3_9HYPH2.340e-5652.60Glutathione S-transferase n=1 Tax=Roseiarcus ferme... [more]
A0A7X3SA37_9HYPH2.690e-5549.13Glutathione S-transferase n=1 Tax=Stappia sp. GBMR... [more]
A0A533IVL5_9BRAD6.030e-5451.98Glutathione S-transferase family protein n=1 Tax=B... [more]
A0A1Z9BMN2_9BACT6.030e-5449.71Glutathione S-transferase n=2 Tax=Bacteria TaxID=2... [more]
A0A2S6NBM2_9HYPH8.810e-5453.18Glutathione S-transferase n=2 Tax=Rhodoblastus sph... [more]
UPI001561501E8.810e-5449.71glutathione S-transferase n=1 Tax=Hongsoonwoonella... [more]
A0A345ZUP4_9HYPH1.250e-5349.13Glutathione S-transferase n=1 Tax=Pseudolabrys tai... [more]
A0A5B2VBW0_9HYPH5.040e-5351.45Glutathione S-transferase n=1 Tax=Salinarimonas so... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17717contigP-wetherbeei_contig17717:1..531 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1333998.M2A_1715
PFAMsGST_C,GST_C_2,GST_N,GST_N_3
Model size531
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944
KEGG koko:K00799
KEGG TC1.A.12.2.2,1.A.12.3.2
KEGG ReactionR03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905
KEGG Pathwayko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.06e-51
EggNOG OGsCOG0625@1|root,COG0625@2|Bacteria,1Q05U@1224|Proteobacteria,2U5IH@28211|Alphaproteobacteria
EC2.5.1.18
DescriptionGlutathione S-transferase
Cds size531
COG categoryO
BRITEko00000,ko00001,ko01000,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186124.7174833-CDS-P-wetherbeei_contig17717:0..5311683186124.7174833-CDS-P-wetherbeei_contig17717:0..531Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17717 1..531 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17717.1.1prot_P-wetherbeei_contig17717.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17717 1..531 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17717.1.1

>prot_P-wetherbeei_contig17717.1.1 ID=prot_P-wetherbeei_contig17717.1.1|Name=mRNA_P-wetherbeei_contig17717.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=177bp
MLLYDYRAAPNPRRVRMFLAEKGVTIPTVQINLIKGQHRLADYMAKDPFV
LVPLLELDNGKLLGESVSICRYIEELHPTPPLLGRDTEERAFIDMWSRRA
EFELLPSIAGVFRHGTEIGKALEPDQIAAWARASKARALRAMQIFDNVLA
GRRYVAGPDFSIADITLLCSIDFGANT
back to top

mRNA from alignment at P-wetherbeei_contig17717:1..531-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17717.1.1 ID=mRNA_P-wetherbeei_contig17717.1.1|Name=mRNA_P-wetherbeei_contig17717.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=531bp|location=Sequence derived from alignment at P-wetherbeei_contig17717:1..531- (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGCTATATGATTACCGCGCCGCGCCCAACCCGCGCCGGGTGCGGAT GTTCCTTGCGGAAAAAGGCGTCACCATTCCCACGGTGCAGATTAACCTGA TCAAGGGGCAGCACAGGCTGGCAGATTATATGGCCAAGGATCCATTTGTA CTGGTGCCGCTGCTGGAACTGGATAATGGCAAACTGCTGGGGGAATCGGT TTCCATCTGCCGTTATATCGAAGAACTGCATCCCACGCCGCCGCTGCTCG GGCGTGACACGGAGGAACGCGCATTTATCGACATGTGGTCCCGGCGCGCC GAATTTGAATTGCTGCCGTCCATCGCGGGAGTTTTTCGCCACGGCACGGA AATTGGCAAGGCGCTGGAACCCGATCAGATTGCAGCCTGGGCCAGGGCGT CCAAGGCGCGCGCGTTACGGGCCATGCAGATCTTCGACAATGTGCTGGCC GGCCGCCGCTATGTCGCCGGGCCGGATTTTTCCATCGCGGACATAACGCT GCTCTGTTCGATTGATTTCGGCGCCAATACC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig17717:1..531-

>mRNA_P-wetherbeei_contig17717.1.1 ID=mRNA_P-wetherbeei_contig17717.1.1|Name=mRNA_P-wetherbeei_contig17717.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=531bp|location=Sequence derived from alignment at P-wetherbeei_contig17717:1..531- (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGCTATATGATTACCGCGCCGCGCCCAACCCGCGCCGGGTGCGGAT
GTTCCTTGCGGAAAAAGGCGTCACCATTCCCACGGTGCAGATTAACCTGA
TCAAGGGGCAGCACAGGCTGGCAGATTATATGGCCAAGGATCCATTTGTA
CTGGTGCCGCTGCTGGAACTGGATAATGGCAAACTGCTGGGGGAATCGGT
TTCCATCTGCCGTTATATCGAAGAACTGCATCCCACGCCGCCGCTGCTCG
GGCGTGACACGGAGGAACGCGCATTTATCGACATGTGGTCCCGGCGCGCC
GAATTTGAATTGCTGCCGTCCATCGCGGGAGTTTTTCGCCACGGCACGGA
AATTGGCAAGGCGCTGGAACCCGATCAGATTGCAGCCTGGGCCAGGGCGT
CCAAGGCGCGCGCGTTACGGGCCATGCAGATCTTCGACAATGTGCTGGCC
GGCCGCCGCTATGTCGCCGGGCCGGATTTTTCCATCGCGGACATAACGCT
GCTCTGTTCGATTGATTTCGGCGCCAATACC
back to top