mRNA_P-wetherbeei_contig17716.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17716.1.1 vs. uniprot
Match: D7FX60_ECTSI (WD40 repeat-containing protein SMU1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX60_ECTSI) HSP 1 Score: 203 bits (517), Expect = 3.170e-60 Identity = 102/162 (62.96%), Postives = 132/162 (81.48%), Query Frame = 1
Query: 4 QVSALALPLGKLVDLYEQIVLELLEMRETELARELLRSADPFVALKTEDPERYLRLEHFLQRASGGGKGXXXGPLDMRDLYPPGSSKEKRRAQIADALLPELTVVPPGRLLALMGQAIKYQYLSGALQRGQKHDLFRGGVRRERRDVDERPPRKFAGQIKFG 489
QVS+L+LPL KLV +YEQ+VLELLEMRE ++ARE+LR+ADPF+ +K E+P+RYLRLEH+LQ+ + +D RDLYP GSSKEKRRA+IA+ L+PE++VVPP RLLAL+ QA+K+Q + G L RGQK DLFRGG R ++D++E+PPRK AGQIKFG
Sbjct: 62 QVSSLSLPLAKLVAVYEQLVLELLEMRELDVAREILRTADPFLQMKKEEPDRYLRLEHWLQKGAA---------IDPRDLYPAGSSKEKRRAEIANMLIPEVSVVPPSRLLALVNQALKWQQVQGLLPRGQKFDLFRGGARASKKDMEEKPPRKMAGQIKFG 214
BLAST of mRNA_P-wetherbeei_contig17716.1.1 vs. uniprot
Match: A0A835ZIM7_9STRA (WD40 repeat-containing protein SMU1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIM7_9STRA) HSP 1 Score: 192 bits (488), Expect = 1.080e-55 Identity = 108/166 (65.06%), Postives = 128/166 (77.11%), Query Frame = 1
Query: 4 QVSALALPLGKLVDLYEQIVLELLEMRETELARELLRSADPFVALKTEDPERYLRLEHFLQRA-SGGGKGXXXGPLDMRDLYPPGSSKEKRRAQIADALLPELTVVPPGRLLALMGQAIKYQYLSGALQ---RGQKHDLFRGGVRRERRDVDERPPRKFAGQIKFG 489
QVS LALPL LV LYEQ+VLELLEMRE ELARELLR+A+PF LK E+PER+L+LEH+++RA SGGG LD RDLY G+S+EKRRA++ADA+L E +VV P RLLAL+GQA+K+Q L G L G K+DLFRG R RRD +ERPPRK AGQIKFG
Sbjct: 62 QVSGLALPLNTLVALYEQVVLELLEMREGELARELLRTAEPFAKLKVENPERFLKLEHWVKRACSGGGTS-----LDPRDLYAAGNSREKRRAEVADAVLAEASVVAPSRLLALLGQALKWQQLQGQLPPRGTGGKYDLFRGAQRARRRDEEERPPRKLAGQIKFG 222
BLAST of mRNA_P-wetherbeei_contig17716.1.1 vs. uniprot
Match: K8YWD5_NANGC (WD40 repeat-containing protein SMU1 (Fragment) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YWD5_NANGC) HSP 1 Score: 160 bits (406), Expect = 1.410e-43 Identity = 87/162 (53.70%), Postives = 113/162 (69.75%), Query Frame = 1
Query: 4 QVSALALPLGKLVDLYEQIVLELLEMRETELARELLRSADPFVALKTEDPERYLRLEHFLQRASGGGKGXXXGPLDMRDLYPPGSSKEKRRAQIADALLPELTVVPPGRLLALMGQAIKYQYLSGALQRGQKHDLFRGGVRRERRDVDERPPRKFAGQIKFG 489
Q + L LP KL+ LYEQ+ LEL+EMRETELARE+LR+ +P LKT+DP+RY RLE FL R D ++LY G +KE+RR +IAD+L E++VVPP RLLAL+ QA++YQ L G L + +++DLFRG R +D ERPP+K AGQIKFG
Sbjct: 121 QAAGLQLPQDKLLALYEQVCLELIEMRETELAREMLRTTEPLQLLKTQDPDRYFRLETFLNRKIH----------DAQELYAYGLNKERRRQEIADSLAVEVSVVPPSRLLALLQQALRYQQLQGNLPKDRRYDLFRGSARSAGKDEAERPPKKQAGQIKFG 272
BLAST of mRNA_P-wetherbeei_contig17716.1.1 vs. uniprot
Match: A0A812XB43_SYMMI (WD40 repeat-containing protein SMU1 (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XB43_SYMMI) HSP 1 Score: 141 bits (355), Expect = 9.570e-38 Identity = 79/162 (48.77%), Postives = 109/162 (67.28%), Query Frame = 1
Query: 4 QVSALALPLGKLVDLYEQIVLELLEMRETELARELLRSADPFVALKTEDPERYLRLEHFLQRASGGGKGXXXGPLDMR-DLYPPGSSKEKRRAQIADALLPELTVVPPGRLLALMGQAIKYQYLSGALQRGQKHDLFRGGVRRERRDVDERPPRKFAGQIKF 486
QVS+L LP KLV+LYEQ+V+ELLE RE ELA+ELLR+ +P +K + P+RYL+LEH QR P+ + D Y G+SK+++R +IA L E++VVPP RLL+L+GQA+++Q G L + DLFRGG R R+D DE+ P + AG+I F
Sbjct: 22 QVSSLQLPREKLVNLYEQVVIELLEAREIELAKELLRTTEPMRVMKIDQPDRYLKLEHLCQR-----------PVFVASDAYEMGTSKQQKRQEIAQMLSTEISVVPPSRLLSLIGQALRFQQAQGLLPKDGTMDLFRGGRRSARKDQDEKLPTRQAGRITF 172
BLAST of mRNA_P-wetherbeei_contig17716.1.1 vs. uniprot
Match: A0A443S2U1_9ACAR (WD40 repeat-containing protein SMU1 n=1 Tax=Leptotrombidium deliense TaxID=299467 RepID=A0A443S2U1_9ACAR) HSP 1 Score: 143 bits (360), Expect = 2.710e-37 Identity = 82/161 (50.93%), Postives = 106/161 (65.84%), Query Frame = 1
Query: 7 VSALALPLGKLVDLYEQIVLELLEMRETELARELLRSADPFVALKTEDPERYLRLEHFLQRASGGGKGXXXGPLDMRDLYPPGSSKEKRRAQIADALLPELTVVPPGRLLALMGQAIKYQYLSGALQRGQKHDLFRGGVRRERRDVDERPPRKFAGQIKFG 489
V +L LP KL+DLYEQIV+EL+E+RE AR LLR DP + LK E+PERY+ LE+ L R+ D R+ YPP SSKEKRRAQIA +L E++VVPP RLLAL+GQA+K+Q G L G DLFRG + + ++ +E PP + + I FG
Sbjct: 63 VQSLKLPDKKLIDLYEQIVIELIELRELGAARSLLRQTDPMIKLKQENPERYIHLENLLARSY----------FDPREAYPPASSKEKRRAQIAQSLSGEVSVVPPSRLLALLGQALKWQQHQGLLPPGTAIDLFRGKAQIKEQE-EEAPPTQLSKTITFG 212
BLAST of mRNA_P-wetherbeei_contig17716.1.1 vs. uniprot
Match: A0A6P7GGH2_DIAVI (WD40 repeat-containing protein SMU1 n=1 Tax=Diabrotica virgifera virgifera TaxID=50390 RepID=A0A6P7GGH2_DIAVI) HSP 1 Score: 137 bits (345), Expect = 3.870e-37 Identity = 83/163 (50.92%), Postives = 101/163 (61.96%), Query Frame = 1
Query: 1 RQVSALALPLGKLVDLYEQIVLELLEMRETELARELLRSADPFVALKTEDPERYLRLEHFLQRASGGGKGXXXGPLDMRDLYPPGSSKEKRRAQIADALLPELTVVPPGRLLALMGQAIKYQYLSGALQRGQKHDLFRGGVRRERRDVDERPPRKFAGQIKFG 489
+ + +L LP KL+DLYEQIVLEL+E+RE AR LLR DP + LK +PERY+ LE+ L R+ D R+ Y GSSKEKRRA IA AL E++VVP RLLAL+GQA+K+Q G L G DLFRG R DE P + A QIKFG
Sbjct: 61 KAIQSLKLPDKKLIDLYEQIVLELIELRELGAARSLLRQTDPMIMLKQNEPERYIHLENLLARSY----------FDTREAYSDGSSKEKRRAAIAHALSGEVSVVPSSRLLALLGQALKWQQHQGLLPPGTTIDLFRGKAA-VREQEDETFPTQMAKQIKFG 212
BLAST of mRNA_P-wetherbeei_contig17716.1.1 vs. uniprot
Match: A0A8J6HQJ2_TENMO (WD40 repeat-containing protein SMU1 n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6HQJ2_TENMO) HSP 1 Score: 139 bits (349), Expect = 1.020e-36 Identity = 83/163 (50.92%), Postives = 103/163 (63.19%), Query Frame = 1
Query: 1 RQVSALALPLGKLVDLYEQIVLELLEMRETELARELLRSADPFVALKTEDPERYLRLEHFLQRASGGGKGXXXGPLDMRDLYPPGSSKEKRRAQIADALLPELTVVPPGRLLALMGQAIKYQYLSGALQRGQKHDLFRGGVRRERRDVDERPPRKFAGQIKFG 489
+ + +L LP KL+DLYEQIVLEL+E+RE AR LLR DP + +K +PERY+ LE+ L R+ D R+ YP GSSKEKRRA IA AL E++VVP RLLAL+GQA+K+Q G L G DLFRG R DE+ P + A QIKFG
Sbjct: 61 KAIQSLKLPDKKLIDLYEQIVLELIELRELGAARSLLRQTDPMIMMKQNEPERYIHLENLLARSY----------FDPREAYPDGSSKEKRRAAIAHALSGEVSVVPSSRLLALLGQALKWQQHQGLLPPGTTIDLFRGKAA-IRDQEDEQFPTQMAKQIKFG 212
BLAST of mRNA_P-wetherbeei_contig17716.1.1 vs. uniprot
Match: UPI000C75B930 (WD40 repeat-containing protein SMU1-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C75B930) HSP 1 Score: 141 bits (355), Expect = 1.400e-36 Identity = 80/163 (49.08%), Postives = 103/163 (63.19%), Query Frame = 1
Query: 1 RQVSALALPLGKLVDLYEQIVLELLEMRETELARELLRSADPFVALKTEDPERYLRLEHFLQRASGGGKGXXXGPLDMRDLYPPGSSKEKRRAQIADALLPELTVVPPGRLLALMGQAIKYQYLSGALQRGQKHDLFRGGVRRERRDVDERPPRKFAGQIKFG 489
+ + L LP KL+DLYEQ+V+EL+E+RE AR LLR DP + +K +PERYL LE+ L R+ D R+ YP G SKEKRRA IA +L E++VVPP RLLAL+GQA+K+Q G L G + DLFRG R DE+ P + + QIKFG
Sbjct: 61 KAIQTLKLPDKKLIDLYEQVVIELIELRELGAARSLLRQTDPMIVMKQSEPERYLHLENLLARSY----------FDPREAYPEGGSKEKRRAAIAQSLAGEVSVVPPSRLLALLGQALKWQQHQGLLPPGTQIDLFRGKAAM-REQEDEKYPTQLSKQIKFG 212
BLAST of mRNA_P-wetherbeei_contig17716.1.1 vs. uniprot
Match: A0A0K2SXN6_LEPSM (WD40 repeat-containing protein SMU1 (Fragment) n=3 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A0K2SXN6_LEPSM) HSP 1 Score: 136 bits (343), Expect = 4.180e-36 Identity = 77/163 (47.24%), Postives = 103/163 (63.19%), Query Frame = 1
Query: 1 RQVSALALPLGKLVDLYEQIVLELLEMRETELARELLRSADPFVALKTEDPERYLRLEHFLQRASGGGKGXXXGPLDMRDLYPPGSSKEKRRAQIADALLPELTVVPPGRLLALMGQAIKYQYLSGALQRGQKHDLFRGGVRRERRDVDERPPRKFAGQIKFG 489
+ + L LP KL+DLYEQ+V+EL+E+RE AR LLR DP + +K DP+RY+ LE+ L R+ D R+ YP GS+KE+RRA IA +L E++VVPP RLLAL+GQA+K+Q G L G + DLFRG R +E+ P + QIKFG
Sbjct: 61 KAIQTLKLPDKKLIDLYEQVVIELIELRELGAARSLLRQTDPMIVMKQNDPDRYVHLENLLARSY----------FDPREAYPDGSTKERRRAAIAQSLSGEVSVVPPSRLLALLGQALKWQQHQGLLPPGTQIDLFRGKAAM-REQEEEKFPTMMSKQIKFG 212
BLAST of mRNA_P-wetherbeei_contig17716.1.1 vs. uniprot
Match: T1JMW6_STRMM (WD40 repeat-containing protein SMU1 n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1JMW6_STRMM) HSP 1 Score: 139 bits (351), Expect = 5.230e-36 Identity = 81/163 (49.69%), Postives = 105/163 (64.42%), Query Frame = 1
Query: 1 RQVSALALPLGKLVDLYEQIVLELLEMRETELARELLRSADPFVALKTEDPERYLRLEHFLQRASGGGKGXXXGPLDMRDLYPPGSSKEKRRAQIADALLPELTVVPPGRLLALMGQAIKYQYLSGALQRGQKHDLFRGGVRRERRDVDERPPRKFAGQIKFG 489
+ V L LP KL+DLYEQ+VLEL+E+RE AR LLR DP V +K ++PERY+ LE+ L R+ D R+ YP GSSKE+RRA IA AL E++VVPP RLLAL+GQA+K+Q G L G DLFRG + ++ +E+ P + QIKFG
Sbjct: 61 KAVQTLKLPDKKLIDLYEQVVLELIELRELGAARSLLRQTDPMVMMKQQEPERYVHLENLLARSY----------FDPREAYPDGSSKERRRAAIAHALSGEVSVVPPSRLLALLGQALKWQQHQGLLPPGTTIDLFRGKAAMKEQE-EEKYPTMLSRQIKFG 212 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17716.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17716.1.1 >prot_P-wetherbeei_contig17716.1.1 ID=prot_P-wetherbeei_contig17716.1.1|Name=mRNA_P-wetherbeei_contig17716.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=163bp RQVSALALPLGKLVDLYEQIVLELLEMRETELARELLRSADPFVALKTEDback to top mRNA from alignment at P-wetherbeei_contig17716:435..1403+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17716.1.1 ID=mRNA_P-wetherbeei_contig17716.1.1|Name=mRNA_P-wetherbeei_contig17716.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=969bp|location=Sequence derived from alignment at P-wetherbeei_contig17716:435..1403+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17716:435..1403+ >mRNA_P-wetherbeei_contig17716.1.1 ID=mRNA_P-wetherbeei_contig17716.1.1|Name=mRNA_P-wetherbeei_contig17716.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=489bp|location=Sequence derived from alignment at P-wetherbeei_contig17716:435..1403+ (Phaeothamnion wetherbeei SAG_119_79)back to top |