mRNA_P-wetherbeei_contig177.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig177.1.1 vs. uniprot
Match: A0A836CA23_9STRA (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA23_9STRA) HSP 1 Score: 380 bits (975), Expect = 4.790e-130 Identity = 188/224 (83.93%), Postives = 197/224 (87.95%), Query Frame = 1
Query: 1 KPERIIIIRHGESMGNLDESTYVHVPDWKIPLSKQGYRDARLAGQK-----------VKEYVGDKPLFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIRDSKQERARFGRFYYRFPEGESGLDVYNRATSFIATMFRDFGNESIARDDMNIIIVTHGLTLRLLVMRWFQYSIHDFEETLNPPNGGFVVMERRKDSDVSEAGRGGDC 639
KPERIII+RHGESMGNLDESTYVHVPDWKIPL+KQGYRDARLAGQK +KE+VGDKPLFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIRDSKQERARFGRFYYRFPEGESGLDVYNRATSFIATMFRDF NE IARDD+N++IVTHGLTLRL+VMRWFQYSI DFE T NPPNGG VVMERR GG+C
Sbjct: 80 KPERIIIVRHGESMGNLDESTYVHVPDWKIPLTKQGYRDARLAGQKXXXXXXXXXXKIKEHVGDKPLFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIRDSKQERARFGRFYYRFPEGESGLDVYNRATSFIATMFRDFSNEQIARDDLNVVIVTHGLTLRLMVMRWFQYSIADFENTYNPPNGGHVVMERR----------GGEC 293
BLAST of mRNA_P-wetherbeei_contig177.1.1 vs. uniprot
Match: A0A6H5JRP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRP2_9PHAE) HSP 1 Score: 368 bits (945), Expect = 2.030e-126 Identity = 175/204 (85.78%), Postives = 191/204 (93.63%), Query Frame = 1
Query: 1 KPERIIIIRHGESMGNLDESTYVHVPDWKIPLSKQGYRDARLAGQKVKEYVGDKPLFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIRDSKQERARFGRFYYRFPEGESGLDVYNRATSFIATMFRDFGNESIARDDMNIIIVTHGLTLRLLVMRWFQYSIHDFEETLNPPNGGFVVMERRKDSDV 612
KPERIII+RHGES+GN DESTYVHVPDWKIPL+K+G+ + + AG+K+KEY+GDKPLFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATI +SK ERARFGRFYYRFP+GESGLDVYNRATSFIATMFRDF NESIARDD+N+IIVTHGLTLRLLVMRWFQYSI DFEETLNP NG FVVMER++ D
Sbjct: 39 KPERIIIVRHGESLGNRDESTYVHVPDWKIPLTKKGFGEGQKAGEKIKEYIGDKPLFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIVNSKAERARFGRFYYRFPQGESGLDVYNRATSFIATMFRDFANESIARDDLNVIIVTHGLTLRLLVMRWFQYSIADFEETLNPENGSFVVMERKEKEDT 242
BLAST of mRNA_P-wetherbeei_contig177.1.1 vs. uniprot
Match: D7FZ54_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ54_ECTSI) HSP 1 Score: 368 bits (945), Expect = 4.960e-126 Identity = 175/204 (85.78%), Postives = 191/204 (93.63%), Query Frame = 1
Query: 1 KPERIIIIRHGESMGNLDESTYVHVPDWKIPLSKQGYRDARLAGQKVKEYVGDKPLFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIRDSKQERARFGRFYYRFPEGESGLDVYNRATSFIATMFRDFGNESIARDDMNIIIVTHGLTLRLLVMRWFQYSIHDFEETLNPPNGGFVVMERRKDSDV 612
KPERIII+RHGES+GN DESTYVHVPDWKIPL+K+G+ + + AG+K+KEY+GDKPLFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATI +SK ERARFGRFYYRFP+GESGLDVYNRATSFIATMFRDF NESIARDD+N+IIVTHGLTLRLLVMRWFQYSI DFEETLNP NG FVVMER++ D
Sbjct: 117 KPERIIIVRHGESLGNRDESTYVHVPDWKIPLTKKGFGEGQKAGEKIKEYIGDKPLFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIVNSKAERARFGRFYYRFPQGESGLDVYNRATSFIATMFRDFANESIARDDLNVIIVTHGLTLRLLVMRWFQYSIADFEETLNPENGSFVVMERKEKEDT 320
BLAST of mRNA_P-wetherbeei_contig177.1.1 vs. uniprot
Match: A0A7S1XZK9_9STRA (Hypothetical protein n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZK9_9STRA) HSP 1 Score: 302 bits (774), Expect = 8.290e-99 Identity = 143/228 (62.72%), Postives = 178/228 (78.07%), Query Frame = 1
Query: 1 KPERIIIIRHGESMGNLDESTYVHVPDWKIPLSKQGYRDARLAGQKVKEYVGDKPLFIYTSPYLRTKQTLAG----------------------------MVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIRDSKQERARFGRFYYRFPEGESGLDVYNRATSFIATMFRDFGNESIARDDMNIIIVTHGLTLRLLVMRWFQYSIHDFEETLNPPNGGFVVMERRK 600
+P RII++RHGES GN+D YV+ PDWKIPL+K+G++DARLAGQ++KE VGD P++IYTSPYLRTKQTLAG MV A+DTN IVGVREEPRLTEQQFGNFQN+ +++S+++R RFGRFY+RFPEGESGLDVYNR TSFIAT+FRDF N+ IAR+D+++IIVTHGLTLRL +MR+F Y+IHDFE + NP NG FVVM+R++
Sbjct: 81 RPARIILVRHGESAGNVDPQAYVNTPDWKIPLTKKGWKDARLAGQQIKEIVGDSPIYIYTSPYLRTKQTLAGKGSPQPRSLPLSLAPLPLSSTRPPAPPGMVGAWDTNEIVGVREEPRLTEQQFGNFQNVTNVKESREQRTRFGRFYFRFPEGESGLDVYNRVTSFIATLFRDFSNKDIAREDLDVIIVTHGLTLRLFLMRFFHYTIHDFENSYNPNNGAFVVMQRQE 308
BLAST of mRNA_P-wetherbeei_contig177.1.1 vs. uniprot
Match: A0A4D9D0Z6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D0Z6_9STRA) HSP 1 Score: 283 bits (723), Expect = 9.410e-91 Identity = 135/218 (61.93%), Postives = 165/218 (75.69%), Query Frame = 1
Query: 1 KPERIIIIRHGESMGNLDESTYVHVPDWKIPLSKQGYRDARLAGQKVKEYVGDKPLFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIRDSKQERARFGRFYYRFPEGESGLDVYNRATSFIATMFRDFGNESIARDDMNIIIVTHGLTLRLLVMRWFQYSIHDFEETLNPPNGGFVVMERRKDSDVSEAGRGGDCGYGSY 654
KP RII++RHGES GN+DE YV PDWK+PLS G+ AR G+++K VGD+PL+IYTSPY RTKQTL+ ++E+F+ N VGVREEPR+TEQQFGNFQ ++ +K+ER FGRFY+RFP GESGLDVY R TSFI+TMFRDF + I R D+NI+IVTHGLTLRLL+MRWF+ ++ FE T NPPNG FVVM R+ E RGG G G Y
Sbjct: 174 KPHRIILVRHGESTGNVDERVYVETPDWKVPLSPIGHEQARQTGRQLKALVGDEPLYIYTSPYRRTKQTLSNILESFEDNLKVGVREEPRITEQQFGNFQCQQLMQQAKKERCNFGRFYFRFPNGESGLDVYTRVTSFISTMFRDFADGHICRPDLNIVIVTHGLTLRLLLMRWFKLTVDTFESTTNPPNGSFVVMTRK------EGPRGGRSGGGVY 385
BLAST of mRNA_P-wetherbeei_contig177.1.1 vs. uniprot
Match: A0A7S2SR22_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SR22_9STRA) HSP 1 Score: 258 bits (659), Expect = 2.540e-83 Identity = 119/207 (57.49%), Postives = 157/207 (75.85%), Query Frame = 1
Query: 1 KPERIIIIRHGESMGNLDESTYVHVPDWKIPLSKQGYRDARLAGQKVKEYVGDKPLFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIRDSKQERARFGRFYYRFPEGESGLDVYNRATSFIATMFRD------FGNESIARDDMNIIIVTHGLTLRLLVMRWFQYSIHDFEETLNPPNGGFVVMERRKD 603
+P+RI ++RHGES+GN+ Y++VPDW+I L+++G A+ G K+ +G+ P+F YTSPY RTK+TL MV F+ + IVGVREEPRLTEQQFGNFQNL I+ K ER+ +GRFYYRFP+GESG DVY R ++F+ ++RD FG ARD +N++IV+HGLTLRLL+MRWFQY+I DFE++ NPPN FVVMERR+D
Sbjct: 40 RPKRIFVVRHGESLGNISPEVYINVPDWRISLTEEGKEQAKATGSKISHIIGEDPVFFYTSPYRRTKETLQSMVTEFEQSDIVGVREEPRLTEQQFGNFQNLDEIQICKVERSSYGRFYYRFPQGESGFDVYTRVSTFLPDLYRDAANAELFGEGQTARD-LNVVIVSHGLTLRLLLMRWFQYTISDFEQSHNPPNAAFVVMERRED 245
BLAST of mRNA_P-wetherbeei_contig177.1.1 vs. uniprot
Match: A0A7S0SR39_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SR39_9STRA) HSP 1 Score: 248 bits (632), Expect = 8.280e-79 Identity = 117/203 (57.64%), Postives = 152/203 (74.88%), Query Frame = 1
Query: 4 PERIIIIRHGESMGNLDESTYVHVPDWKIPLSKQGYRDARLAGQKVKEYVGDK-PLFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIRDSKQERARFGRFYYRFPEGESGLDVYNRATSFIATMFRDFGNESIAR---DDMNIIIVTHGLTLRLLVMRWFQYSIHDFEETLNPPNGGFVVMERRK 600
P+RII++RHGES+GN+DE Y +PDWKIPL+++G A G+K+KE +G+ P+ +Y SPY+RTKQT A M++ N ++ VREEPRLTEQQFGNFQ + K+ER +FGRFYYRFP+GESGLDVY+R +SFI T+FR++ E R +D NIIIVTHGLTLRL +MRWFQ+S+ +FE T NP NG +VM R K
Sbjct: 45 PKRIILVRHGESLGNVDELAYCSMPDWKIPLTEKGKEQASNVGKKIKEIIGNNSPISVYLSPYIRTKQTFALMIKELSNNNVITVREEPRLTEQQFGNFQKAEDMIRYKKERGQFGRFYYRFPDGESGLDVYSRVSSFIGTLFREWAKEQSTRSNHEDNNIIIVTHGLTLRLFLMRWFQFSVSEFENTRNPNNGDIIVMNRIK 247
BLAST of mRNA_P-wetherbeei_contig177.1.1 vs. uniprot
Match: A0A7S4UG03_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UG03_9STRA) HSP 1 Score: 233 bits (594), Expect = 4.470e-73 Identity = 105/202 (51.98%), Postives = 149/202 (73.76%), Query Frame = 1
Query: 1 KPERIIIIRHGESMGNLDESTYVHVPDWKIPLSKQGYRDARLAGQKVKEYVGDKPLFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIRDSKQERARFGRFYYRFPEGESGLDVYNRATSFIATMFRD---FGNESIARDDMNIIIVTHGLTLRLLVMRWFQYSIHDFEETLNPPNGGFVVMERR 597
+P+RII++RHG+S+GN+DE+TY H DW+IPLS G AR AG+++ + ++ F+Y SPY RT +T+ + + D+ Y +GVR EPR+ EQQFGNFQ +++S+ ER +FGRF++RFP GE+G+DV+NR TSFI+T+FRD E I+ D++NI++VTHGLTLRL +MRW Q S+ +FEE NP NG VMER+
Sbjct: 76 RPKRIILVRHGQSLGNVDETTYTHTADWRIPLSDLGRIQARDAGRRLHALIQNEKYFVYHSPYARTTETMEIIKKELDSEYCIGVRSEPRIVEQQFGNFQIYDDVQESRDERRKFGRFFFRFPNGEAGMDVFNRVTSFISTIFRDTHYMNVEGISMDELNIVVVTHGLTLRLFLMRWLQISVDEFEEMYNPDNGFLAVMERQ 277
BLAST of mRNA_P-wetherbeei_contig177.1.1 vs. uniprot
Match: A0A7S3XT41_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XT41_HETAK) HSP 1 Score: 228 bits (580), Expect = 2.300e-72 Identity = 107/149 (71.81%), Postives = 123/149 (82.55%), Query Frame = 1
Query: 157 DKPLFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIRDSKQERARFGRFYYRFPEGESGLDVYNRATSFIATMFRDFGNESIARDDMNIIIVTHGLTLRLLVMRWFQYSIHDFEETLNPPNGGFVVMERRKD 603
D PL Y SPY RTKQTLAGM+ A +TN I+G REEPRLTEQQFGNFQN+ T R SK ERARFGRFYYRFP+GESGLDVYNR+TSFIATM RD N ++AR ++ +IVTHGLTLRL +MRWFQYS+ DFEE+ NPPNGG V+ME+ D
Sbjct: 1 DAPLLFYCSPYRRTKQTLAGMMGALETNDIIGAREEPRLTEQQFGNFQNVLTTRQSKDERARFGRFYYRFPQGESGLDVYNRSTSFIATMHRDMANPALARPGLHSVIVTHGLTLRLFLMRWFQYSVEDFEESHNPPNGGVVIMEKVSD 149
BLAST of mRNA_P-wetherbeei_contig177.1.1 vs. uniprot
Match: B8CCE2_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CCE2_THAPS) HSP 1 Score: 226 bits (576), Expect = 5.690e-72 Identity = 107/200 (53.50%), Postives = 148/200 (74.00%), Query Frame = 1
Query: 4 PERIIIIRHGESMGNLDESTYVHVPDWKIPLSKQGYRDARLAGQKVKEYVGDKP--LFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIRDSKQERARFGRFYYRFPEGESGLDVYNRATSFIATMFRD---FGNESIARDDMNIIIVTHGLTLRLLVMRWFQYSIHDFEETLNPPNGGFVVM 588
P+RII+IRHGES GN+D++ YV DW+IP++ G + A+ AG++++E + +K + Y SPYLRTKQTL ++ FD N I+ V EEPR++EQQ GNFQN+ + D+K ER++FGRF+YRFP GE+GLDVY+R +SFI T+ RD + E D++N++IVTHGL LRL +MRWFQ+S+HDFEE+ NP N V M
Sbjct: 1 PKRIILIRHGESQGNVDQNAYVTTADWRIPITNLGKKQAQEAGKQLREKISEKDAKVVFYFSPYLRTKQTLDEILPYFDDNEILSVLEEPRISEQQIGNFQNVQQVLDAKAERSKFGRFFYRFPSGEAGLDVYSRVSSFIPTLVRDCDQYVREGHDLDNLNLVIVTHGLALRLFLMRWFQFSVHDFEESQNPENCELVTM 200 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig177.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig177.1.1 >prot_P-wetherbeei_contig177.1.1 ID=prot_P-wetherbeei_contig177.1.1|Name=mRNA_P-wetherbeei_contig177.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=218bp KPERIIIIRHGESMGNLDESTYVHVPDWKIPLSKQGYRDARLAGQKVKEYback to top mRNA from alignment at P-wetherbeei_contig177:569..2263+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig177.1.1 ID=mRNA_P-wetherbeei_contig177.1.1|Name=mRNA_P-wetherbeei_contig177.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1695bp|location=Sequence derived from alignment at P-wetherbeei_contig177:569..2263+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig177:569..2263+ >mRNA_P-wetherbeei_contig177.1.1 ID=mRNA_P-wetherbeei_contig177.1.1|Name=mRNA_P-wetherbeei_contig177.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=654bp|location=Sequence derived from alignment at P-wetherbeei_contig177:569..2263+ (Phaeothamnion wetherbeei SAG_119_79)back to top |