mRNA_P-wetherbeei_contig17693.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17693.1.1
Unique NamemRNA_P-wetherbeei_contig17693.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17693.1.1 vs. uniprot
Match: A0A5C8PBR3_9HYPH (TP_methylase domain-containing protein n=2 Tax=Vineibacter terrae TaxID=2586908 RepID=A0A5C8PBR3_9HYPH)

HSP 1 Score: 341 bits (874), Expect = 4.330e-111
Identity = 172/271 (63.47%), Postives = 201/271 (74.17%), Query Frame = 3
Query:  261 PFGTKGLPSRAGSLVIVGTGIRTVGQMTTEAVAWIKRADKVLFLVGDPIAEGAIRSLNPAGAQSLADTYVADQDRTDAYGGMVDRILACLRAGDLTCAAFYGHPGVFVSPAHEAIRRARAEGFEARMLPGISAEDCLFADLGVDPGIHGCQSFEATDFVLNRRAPDPTSAVVLWQIGVFGFATHKQGEYALPAMPILIEKLERIYGPAHPMFLYDGAVLPGVQSIIRQIVAANLMTEPLSAAYTLYIPPVRAADPDMDAYNRMIALNAAYK 1073
            P G      R GSL++VGTGIRTVG +T EAVAWIKRADKVL++VGDP+AE  ++ LNPAGA+S+   Y   + R D Y  MV+R LAC+RAG +TC A YGHPGVFV P+HE+IRRARAEGF ARMLPGIS+EDCLFADLGVDPGI+GCQS+EATDF++N R  DP+S+VVLWQIGV G AT K   Y L AMP+LIE+L  IY P HPM+LY+ AV  G + +IRQI AA L   PLSA  TLYIPP      D   Y RM AL AA K
Sbjct:  186 PHGNGANEKRNGSLIVVGTGIRTVGHLTVEAVAWIKRADKVLYVVGDPVAELMLKELNPAGAESMTGMYAEGKPRIDTYNEMVERTLACVRAGLVTCMACYGHPGVFVYPSHESIRRARAEGFSARMLPGISSEDCLFADLGVDPGINGCQSYEATDFLVNCRVIDPSSSVVLWQIGVVGDATFKPYGYDLSAMPLLIERLLSIYPPTHPMYLYEAAVFHGCEPVIRQITAAELAYGPLSAGNTLYIPPAYMRTADPTTYLRMNALIAASK 456          
BLAST of mRNA_P-wetherbeei_contig17693.1.1 vs. uniprot
Match: A0A1H1JMS4_9HYPH (Tetrapyrrole (Corrin/Porphyrin) Methylases n=3 Tax=unclassified Hyphomicrobiales TaxID=41292 RepID=A0A1H1JMS4_9HYPH)

HSP 1 Score: 334 bits (857), Expect = 9.920e-111
Identity = 167/260 (64.23%), Postives = 197/260 (75.77%), Query Frame = 3
Query:  294 GSLVIVGTGIRTVGQMTTEAVAWIKRADKVLFLVGDPIAEGAIRSLNPAGAQSLADTYVADQDRTDAYGGMVDRILACLRAGDLTCAAFYGHPGVFVSPAHEAIRRARAEGFEARMLPGISAEDCLFADLGVDPGIHGCQSFEATDFVLNRRAPDPTSAVVLWQIGVFGFATHKQGEYALPAMPILIEKLERIYGPAHPMFLYDGAVLPGVQSIIRQIVAANLMTEPLSAAYTLYIPPVRAADPDMDAYNRMIALNAAYK 1073
            GSLV+VGTGIRTVG +T EAVAWIK+ADKVL++VGDP+AE  ++ LNP GA+S+   Y   + R D Y  MV+R L C+RAG LTC A YGHPGVFV P+HE+IRRAR+EG+ ARMLPGIS+EDCLFADLGVDPGI+GCQS+EATDF+LN R  DPTS+VVLWQIGV G AT K   Y L AMP+LIE+L  IY  AHPM+LY+ AV  G + +IRQI AA L   PLSA  TLYIPP   +  D   Y RM A+ AA K
Sbjct:   41 GSLVVVGTGIRTVGHLTMEAVAWIKQADKVLYVVGDPVAELVLKELNPLGAESMTGMYAEGKQRIDTYNQMVERTLECIRAGMLTCVACYGHPGVFVYPSHESIRRARSEGYSARMLPGISSEDCLFADLGVDPGINGCQSYEATDFLLNGRVIDPTSSVVLWQIGVVGDATFKAMGYDLSAMPLLIERLLNIYPAAHPMYLYEAAVFHGCEPMIRQITAAELAYGPLSAGNTLYIPPAYQSRSDPTTYYRMNAMIAANK 300          
BLAST of mRNA_P-wetherbeei_contig17693.1.1 vs. uniprot
Match: UPI0004226E9E (SAM-dependent methyltransferase n=1 Tax=Solirubrobacter soli TaxID=363832 RepID=UPI0004226E9E)

HSP 1 Score: 316 bits (810), Expect = 3.480e-104
Identity = 154/257 (59.92%), Postives = 191/257 (74.32%), Query Frame = 3
Query:  288 RAGSLVIVGTGIRTVGQMTTEAVAWIKRADKVLFLVGDPIAEGAIRSLNPAGAQSLADTYVADQDRTDAYGGMVDRILACLRAGDLTCAAFYGHPGVFVSPAHEAIRRARAEGFEARMLPGISAEDCLFADLGVDPGIHGCQSFEATDFVLNRRAPDPTSAVVLWQIGVFGFATHKQGEYALPAMPILIEKLERIYGPAHPMFLYDGAVLPGVQSIIRQIVAANLMTEPLSAAYTLYIPPVRAADPDMDAYNRMIAL 1058
            + GSLV+VGTGIRTVGQ+T EA+AWI+RAD+VL+++GDP+AE  I  LNP GA+SL+  Y  ++ R   Y  M+ RIL C+RAG LTC A YGHPGVFV P+HE+IRRAR EG+ ARMLPGISAEDCLFADLG+DPGI+GCQS+EATDF+ N R  DPTS+V+LWQIGV G AT+K+  Y L A P+L+E+L +IY P H ++LY+ AV PG + II  +    L   P SA YTLYIPP      D   Y RM A+
Sbjct:    7 QVGSLVVVGTGIRTVGQLTVEAIAWIERADRVLYVIGDPVAEAMIAKLNPDGAESLSGFYAENKSRLTTYEEMIQRILECVRAGMLTCLACYGHPGVFVYPSHESIRRARMEGYSARMLPGISAEDCLFADLGIDPGIYGCQSYEATDFLANGRRIDPTSSVILWQIGVVGDATYKRYGYDLSAFPLLMERLLQIYPPDHIVYLYEAAVFPGCEPIINPVPLRTLGEVPKSAGYTLYIPPAFPTVSDPMIYARMRAM 263          
BLAST of mRNA_P-wetherbeei_contig17693.1.1 vs. uniprot
Match: UPI00194DEE71 (SAM-dependent methyltransferase n=1 Tax=Archangium violaceum TaxID=83451 RepID=UPI00194DEE71)

HSP 1 Score: 288 bits (736), Expect = 4.660e-93
Identity = 142/257 (55.25%), Postives = 180/257 (70.04%), Query Frame = 3
Query:  294 GSLVIVGTGIRTVGQMTTEAVAWIKRADKVLFLVGDPIAEGAIRSLNPAGAQSLADTYVADQDRTDAYGGMVDRILACLRAGDLTCAAFYGHPGVFVSPAHEAIRRARAEGFEARMLPGISAEDCLFADLGVDPGIHGCQSFEATDFVLNRRAPDPTSAVVLWQIGVFGFATHKQGEYALPAMPILIEKLERIYGPAHPMFLYDGAVLPGVQSIIRQIVAANLMTEPLSAAYTLYIPPVRAADPDMDAYNRMIALNA 1064
            GSL++VGTGI  VGQ+TTEA+AW++RADKVL++V +P++   I+ LNP GA+SL   Y   + RTD Y  MV+R+L C+RAG LTC A YGHPGVF  P+HEAIRRAR EG+ A+MLPGISAEDCLFADLGVDP   GCQS+EATDF+L RR  D +SAV+LWQIG  G  T+KQ  Y L A+P+L+E+L   Y   H + LY  + LPG +  IR++    L    +  + TLYIPP R  + D     R+ AL A
Sbjct:    4 GSLIVVGTGISPVGQLTTEAIAWMRRADKVLYIVSNPVSVAVIQDLNPRGAESLVGLYADGKLRTDTYEEMVERVLTCVRAGQLTCLALYGHPGVFAYPSHEAIRRARREGYRAQMLPGISAEDCLFADLGVDPKT-GCQSYEATDFLLYRRPLDVSSAVILWQIGAIGDWTYKQERYDLSALPLLVERLLPFYSEDHEVCLYQASTLPGCEPTIRRLPLKRLAEADIPPSMTLYIPPARPPEVDEAMVERLRALRA 259          
BLAST of mRNA_P-wetherbeei_contig17693.1.1 vs. uniprot
Match: A0A535F6S7_9CHLR (TP_methylase domain-containing protein n=4 Tax=Chloroflexi TaxID=200795 RepID=A0A535F6S7_9CHLR)

HSP 1 Score: 285 bits (729), Expect = 5.340e-92
Identity = 136/248 (54.84%), Postives = 180/248 (72.58%), Query Frame = 3
Query:  285 SRAGSLVIVGTGIRTVGQMTTEAVAWIKRADKVLFLVGDPIAEGAIRSLNPAGAQSLADTYVADQDRTDAYGGMVDRILACLRAGDLTCAAFYGHPGVFVSPAHEAIRRARAEGFEARMLPGISAEDCLFADLGVDPGIHGCQSFEATDFVLNRRAPDPTSAVVLWQIGVFGFATHKQGEYALPAMPILIEKLERIYGPAHPMFLYDGAVLPGVQSIIRQIVAANLMTEPLSAAYTLYIPPVRAADPD 1028
            ++ GSLV++GTGIRTVGQ+T EA+AW++ AD +L++V DP+AE  I+ LNP GA SLA  Y   + R   Y  MV+ IL C+RAG+ T AAFYGHPGVF  P+HE+IRRA++EGF ARMLPGIS+EDCLFADLGVDP   GCQS+EATDF+L+    DP+S ++LWQ+G+    THK  ++   AMP+L++KL + Y  +HP+ LY  A+LPG + +I QI   +L   P++A  TLYI P  A  PD
Sbjct:    5 TKRGSLVVIGTGIRTVGQLTIEAIAWMEIADSLLYVVADPVAEAVIKHLNPTGADSLARYYEEGKLRIHTYNAMVEHILRCVRAGNKTVAAFYGHPGVFAYPSHESIRRAKSEGFPARMLPGISSEDCLFADLGVDPATWGCQSYEATDFLLSSSFIDPSSQLILWQVGLLAELTHKSQQFDTRAMPLLVQKLTQFYPLSHPVTLYQAAMLPGTEPLIVQIPLYSLAEFPITAGMTLYISPAWARVPD 252          
BLAST of mRNA_P-wetherbeei_contig17693.1.1 vs. uniprot
Match: A0A2V7W918_9BACT (TP_methylase domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7W918_9BACT)

HSP 1 Score: 279 bits (714), Expect = 3.030e-89
Identity = 129/243 (53.09%), Postives = 174/243 (71.60%), Query Frame = 3
Query:  300 LVIVGTGIRTVGQMTTEAVAWIKRADKVLFLVGDPIAEGAIRSLNPAGAQSLADTYVADQDRTDAYGGMVDRILACLRAGDLTCAAFYGHPGVFVSPAHEAIRRARAEGFEARMLPGISAEDCLFADLGVDPGIHGCQSFEATDFVLNRRAPDPTSAVVLWQIGVFGFATHKQGEYALPAMPILIEKLERIYGPAHPMFLYDGAVLPGVQSIIRQIVAANLMTEPLSAAYTLYIPPVRAADPD 1028
            LV++GTGIRT+GQMTTE++AWIK+ADKV+++V DPIAE  I++LNP GA+S+   Y  ++ R D Y  M++++L  +R G   C A YGHPGVF  P HE++RRA+AEGF+ARMLPG+SAEDCLFAD+ +DP + GCQS+EATDF++N R  DP+S V+LWQIGV G AT K+  Y     P L++KL + Y P H  ++Y+  + PGV+ +IR      L    +SA  TLYIPP +   PD
Sbjct:    6 LVVIGTGIRTIGQMTTESIAWIKKADKVVYIVSDPIAENLIKTLNPEGAESMYQLYAENKQRIDTYNEMIEKVLGYVREGKRVCFAAYGHPGVFAYPTHESVRRAKAEGFKARMLPGVSAEDCLFADMNIDPAMSGCQSYEATDFLINGRMIDPSSHVILWQIGVLGDATFKKVAYDTKGWPQLLQKLFQYYSPYHVAYVYEAPLFPGVEPVIRPTSLIMLPYSGVSAISTLYIPPGQPPRPD 248          
BLAST of mRNA_P-wetherbeei_contig17693.1.1 vs. uniprot
Match: A0A2V6E6G1_9BACT (TP_methylase domain-containing protein n=2 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V6E6G1_9BACT)

HSP 1 Score: 282 bits (721), Expect = 3.680e-89
Identity = 138/248 (55.65%), Postives = 179/248 (72.18%), Query Frame = 3
Query:  285 SRAGSLVIVGTGIRTVGQMTTEAVAWIKRADKVLFLVGDPIAEGAIRSLNPAGAQSLADTYVADQDRTDAYGGMVDRILACLRAGDLTCAAFYGHPGVFVSPAHEAIRRARAEGFEARMLPGISAEDCLFADLGVDPGIHGCQSFEATDFVLNRRAPDPTSAVVLWQIGVFGFATHKQGEYALPAMPILIEKLERIYGPAHPMFLYDGAVLPGVQSIIRQIVAANLMTEPLSAAYTLYIPPVRAADPD 1028
            ++AG+LVIVGTGIRTVGQ+T EA+AW++RAD+++ LV DP+AE  I  L P    +L   Y   + R ++Y  M++ IL+ +RAG L C AFYGHPGVF  P HE+IRRARAEG+ A MLPGIS EDCLFADLGVDP I GCQS+EATDF++NRR  DP+S ++LWQIGV G  T+++  Y L ++PIL+ KL   Y P H + +Y+  + PG    I +I  A L + PLS A TLY+PP RAA+PD
Sbjct:  124 NKAGALVIVGTGIRTVGQLTMEALAWMQRADEIIHLVADPVAEALIAGLKPGKEFTLQGFYSEGKPRAESYNEMIEFILSRVRAGVLVCGAFYGHPGVFAYPPHESIRRARAEGYAAWMLPGISVEDCLFADLGVDP-IGGCQSYEATDFLINRRILDPSSQLILWQIGVLGHWTYRRSGYDLRSLPILLHKLLEHYPPTHEIVVYEAPIFPGCAPAITRIALAQLASVPLSGASTLYLPPARAANPD 370          
BLAST of mRNA_P-wetherbeei_contig17693.1.1 vs. uniprot
Match: UPI001BA6B235 (SAM-dependent methyltransferase n=1 Tax=Bradyrhizobium jicamae TaxID=280332 RepID=UPI001BA6B235)

HSP 1 Score: 273 bits (699), Expect = 1.500e-87
Identity = 131/236 (55.51%), Postives = 167/236 (70.76%), Query Frame = 3
Query:  300 LVIVGTGIRTVGQMTTEAVAWIKRADKVLFLVGDPIAEGAIRSLNPAGAQSLADTYVADQDRTDAYGGMVDRILACLRAGDLTCAAFYGHPGVFVSPAHEAIRRARAEGFEARMLPGISAEDCLFADLGVDPGIHGCQSFEATDFVLNRRAPDPTSAVVLWQIGVFGFATHKQGEYALPAMPILIEKLERIYGPAHPMFLYDGAVLPGVQSIIRQIVAANLMTEPLSAAYTLYIPP 1007
            L+++GTGIRTVGQMT E+V WIKRADKVL++V DPIAE  I+SLNP GA+SL   Y  ++ R   Y  M++  L  +R G   C A YGHPGVF  P HE++RRARAEGF+ARMLPG+SAEDC+FADL  DP + GCQS+EATDF++N R  D TS V+LWQIGV G  T K   Y +  MP L++KL R Y P H +++Y+  + PGV+ +IR++    L    +SA  TLYIPP
Sbjct:    6 LIVIGTGIRTVGQMTMESVGWIKRADKVLYIVSDPIAEELIKSLNPDGAESLFHLYGENKPRIQTYHEMIELALGYVRGGKRVCMAAYGHPGVFAYPTHESVRRARAEGFKARMLPGVSAEDCMFADLNFDPAMAGCQSYEATDFLVNGRQIDNTSNVILWQIGVLGDTTFKARAYDIKGMPQLLQKLYRYYSPYHDVYVYEAPIFPGVEPVIRKVPLYMLPQAGVSAISTLYIPP 241          
BLAST of mRNA_P-wetherbeei_contig17693.1.1 vs. uniprot
Match: UPI0013EE269D (SAM-dependent methyltransferase n=1 Tax=Aquisphaera sp. JC669 TaxID=2712864 RepID=UPI0013EE269D)

HSP 1 Score: 273 bits (698), Expect = 2.950e-87
Identity = 133/258 (51.55%), Postives = 179/258 (69.38%), Query Frame = 3
Query:  294 GSLVIVGTGIRTVGQMTTEAVAWIKRADKVLFLVGDPIAEGAIRSLNPAGAQSLADTYVADQDRTDAYGGMVDRILACLRAGDLTCAAFYGHPGVFVSPAHEAIRRARAEGFEARMLPGISAEDCLFADLGVDPGIHGCQSFEATDFVLNRRAPDPTSAVVLWQIGVFGFATHKQGEYALPAMPILIEKLERIYGPAHPMFLYDGAVLPGVQSIIRQIVAANLMTEPLSAAYTLYIPPVRAADPDMDAYNRMIALNAA 1067
            GSL+ VGTGIR  GQ+TTEA+AW++RAD+VL++VGDPIAE AIR LNP GA+SL   Y     R  +Y  MV R+L C+R+G +TC   YGHPG+F +P HEA+R+ARAEG+ AR+LP ISAEDCLFADL VDP  +GCQ++EA DF+L+ R  D +++VVLWQIGV G   +++G Y L  +P L+E+L   Y P H  ++Y+ A LP   S +     + L    L++A TLYIPP R +  D     R+ A+++A
Sbjct:   10 GSLIAVGTGIRIAGQLTTEAIAWMRRADRVLYVVGDPIAEVAIRELNPQGAESLLPMYGEGMPRQQSYRAMVGRMLDCVRSGMVTCTVTYGHPGIFATPTHEAVRQARAEGYPARILPAISAEDCLFADLCVDPAANGCQTYEAADFLLHGRVIDNSASVVLWQIGVGGDPLYRRGGYDLSLLPSLVERLRLFYPPDHIGYVYEAATLPATSSYVCPCPLSELCRTRLTSASTLYIPPWRVSSVDPAVQARIAAMHSA 267          
BLAST of mRNA_P-wetherbeei_contig17693.1.1 vs. uniprot
Match: A0A1G5EYS5_9HYPH (Tetrapyrrole (Corrin/Porphyrin) Methylases n=2 Tax=Microvirga TaxID=186650 RepID=A0A1G5EYS5_9HYPH)

HSP 1 Score: 271 bits (694), Expect = 1.310e-86
Identity = 129/250 (51.60%), Postives = 178/250 (71.20%), Query Frame = 3
Query:  300 LVIVGTGIRTVGQMTTEAVAWIKRADKVLFLVGDPIAEGAIRSLNPAGAQSLADTYVADQDRTDAYGGMVDRILACLRAGDLTCAAFYGHPGVFVSPAHEAIRRARAEGFEARMLPGISAEDCLFADLGVDPGIHGCQSFEATDFVLNRRAPDPTSAVVLWQIGVFGFATHKQGEYALPAMPILIEKLERIYGPAHPMFLYDGAVLPGVQSIIRQIVAANLMTEPLSAAYTLYIPPVRAADPDMDAYNRM 1049
            L++VGTGIRT GQ+T E +A ++ A ++ ++V DP+AE  IR L P GA++L D Y   + R   Y  MVDRILA +R+G+ T AAFYGHPGV+   +HE+IRRARAEGF ARMLPGISAEDCLFADLG+DP  +GCQS+EATDF+LN R+ D ++ ++LWQ G+ G  T ++  Y + AMP+L+EKL   Y   HP++LY+   +PG + +IR I+   ++T  ++A  TLY+PP RA  PD    +R+
Sbjct:   17 LLVVGTGIRTTGQLTVETIACMQCAARLFYIVADPVAEEVIRRLCPDGAETLYDLYGEGKPRMQTYQEMVDRILASVRSGERTVAAFYGHPGVYAYASHESIRRARAEGFRARMLPGISAEDCLFADLGIDPSANGCQSYEATDFLLNSRSVDNSAQLILWQAGLVGDLTFRRYAYDISAMPLLLEKLSLFYPRTHPVYLYEAPTVPGCEPMIRPIMLEEILTASITATTTLYLPPARATMPDPTYLSRV 266          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17693.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5C8PBR3_9HYPH4.330e-11163.47TP_methylase domain-containing protein n=2 Tax=Vin... [more]
A0A1H1JMS4_9HYPH9.920e-11164.23Tetrapyrrole (Corrin/Porphyrin) Methylases n=3 Tax... [more]
UPI0004226E9E3.480e-10459.92SAM-dependent methyltransferase n=1 Tax=Solirubrob... [more]
UPI00194DEE714.660e-9355.25SAM-dependent methyltransferase n=1 Tax=Archangium... [more]
A0A535F6S7_9CHLR5.340e-9254.84TP_methylase domain-containing protein n=4 Tax=Chl... [more]
A0A2V7W918_9BACT3.030e-8953.09TP_methylase domain-containing protein n=1 Tax=Aci... [more]
A0A2V6E6G1_9BACT3.680e-8955.65TP_methylase domain-containing protein n=2 Tax=Ver... [more]
UPI001BA6B2351.500e-8755.51SAM-dependent methyltransferase n=1 Tax=Bradyrhizo... [more]
UPI0013EE269D2.950e-8751.55SAM-dependent methyltransferase n=1 Tax=Aquisphaer... [more]
A0A1G5EYS5_9HYPH1.310e-8651.60Tetrapyrrole (Corrin/Porphyrin) Methylases n=2 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17693contigP-wetherbeei_contig17693:287..1377 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog756067.MicvaDRAFT_4882
PFAMsTP_methylase
Model size1091
Max annot lvl1117|Cyanobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.46e-75
EggNOG OGsCOG2241@1|root,COG2241@2|Bacteria,1G2V3@1117|Cyanobacteria,1H9B7@1150|Oscillatoriales
DescriptionTetrapyrrole (Corrin/Porphyrin) Methylases
Cds size849
COG categoryH
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186123.506879-UTR-P-wetherbeei_contig17693:286..5281683186123.506879-UTR-P-wetherbeei_contig17693:286..528Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig17693 287..528 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186123.5180628-CDS-P-wetherbeei_contig17693:528..13771683186123.5180628-CDS-P-wetherbeei_contig17693:528..1377Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17693 529..1377 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17693.1.1prot_P-wetherbeei_contig17693.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17693 529..1377 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17693.1.1

>prot_P-wetherbeei_contig17693.1.1 ID=prot_P-wetherbeei_contig17693.1.1|Name=mRNA_P-wetherbeei_contig17693.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=283bp
MADRDDPFGTKGLPSRAGSLVIVGTGIRTVGQMTTEAVAWIKRADKVLFL
VGDPIAEGAIRSLNPAGAQSLADTYVADQDRTDAYGGMVDRILACLRAGD
LTCAAFYGHPGVFVSPAHEAIRRARAEGFEARMLPGISAEDCLFADLGVD
PGIHGCQSFEATDFVLNRRAPDPTSAVVLWQIGVFGFATHKQGEYALPAM
PILIEKLERIYGPAHPMFLYDGAVLPGVQSIIRQIVAANLMTEPLSAAYT
LYIPPVRAADPDMDAYNRMIALNAAYKEVEEG*
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mRNA from alignment at P-wetherbeei_contig17693:287..1377+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17693.1.1 ID=mRNA_P-wetherbeei_contig17693.1.1|Name=mRNA_P-wetherbeei_contig17693.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1091bp|location=Sequence derived from alignment at P-wetherbeei_contig17693:287..1377+ (Phaeothamnion wetherbeei SAG_119_79)
GGGGCGGAGGGCGACGTGGCCGACGATCGATTGATGGCTTTTTGGGTCGC ACTGGCGACCGATCCGATGAAGCACGAGGCGTTCCTGCGCGAGCCTGACG CGGCGATGGATGCCGCCGGGCTCGACGAGTCCGAGCGCGCCGTCGTGAGG AGCGGCGATGCGCGCACGATCTACACGCGGCTGACTCGCACGGCGCTGCC GTCGGCGCCGCCGGCGCCTGCTTCGCTGCCGGGGAAGAGCTGATGGCCGA TCGCGACGATCCCTTCGGCACCAAGGGCCTGCCGTCGCGCGCCGGGTCGC TGGTGATCGTCGGCACCGGCATCCGCACCGTGGGCCAGATGACCACCGAG GCGGTGGCGTGGATCAAGCGTGCCGACAAGGTGCTCTTTCTGGTCGGCGA TCCGATCGCCGAGGGTGCGATCCGCTCACTCAACCCCGCCGGTGCACAGT CGCTGGCCGACACCTATGTCGCCGACCAGGATCGCACGGATGCCTATGGC GGCATGGTCGATCGCATCCTCGCCTGCCTGCGCGCCGGCGATCTGACCTG CGCGGCCTTCTATGGCCATCCCGGCGTCTTCGTCTCGCCGGCGCACGAGG CAATCCGCCGGGCGCGCGCCGAGGGCTTCGAGGCGCGTATGCTGCCGGGC ATCTCGGCCGAGGATTGCCTGTTCGCCGATCTCGGCGTCGATCCCGGCAT CCATGGCTGCCAGTCCTTCGAGGCCACCGACTTCGTGCTCAACCGGCGCG CGCCCGATCCGACATCGGCGGTGGTGCTGTGGCAGATCGGCGTCTTCGGA TTCGCCACCCACAAGCAGGGCGAGTACGCGTTGCCTGCCATGCCGATCCT GATCGAGAAGCTCGAGCGCATCTACGGCCCGGCCCACCCGATGTTTCTCT ACGATGGCGCGGTGCTGCCGGGTGTCCAGTCGATCATCCGCCAGATCGTC GCGGCCAACCTGATGACCGAGCCGCTCTCGGCCGCCTACACGCTCTACAT CCCGCCCGTGCGCGCCGCCGACCCTGATATGGACGCCTACAATCGCATGA TCGCGCTCAACGCGGCGTACAAGGAAGTGGAAGAGGGATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17693:287..1377+

>mRNA_P-wetherbeei_contig17693.1.1 ID=mRNA_P-wetherbeei_contig17693.1.1|Name=mRNA_P-wetherbeei_contig17693.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=849bp|location=Sequence derived from alignment at P-wetherbeei_contig17693:287..1377+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCCGATCGCGACGATCCCTTCGGCACCAAGGGCCTGCCGTCGCGCGC
CGGGTCGCTGGTGATCGTCGGCACCGGCATCCGCACCGTGGGCCAGATGA
CCACCGAGGCGGTGGCGTGGATCAAGCGTGCCGACAAGGTGCTCTTTCTG
GTCGGCGATCCGATCGCCGAGGGTGCGATCCGCTCACTCAACCCCGCCGG
TGCACAGTCGCTGGCCGACACCTATGTCGCCGACCAGGATCGCACGGATG
CCTATGGCGGCATGGTCGATCGCATCCTCGCCTGCCTGCGCGCCGGCGAT
CTGACCTGCGCGGCCTTCTATGGCCATCCCGGCGTCTTCGTCTCGCCGGC
GCACGAGGCAATCCGCCGGGCGCGCGCCGAGGGCTTCGAGGCGCGTATGC
TGCCGGGCATCTCGGCCGAGGATTGCCTGTTCGCCGATCTCGGCGTCGAT
CCCGGCATCCATGGCTGCCAGTCCTTCGAGGCCACCGACTTCGTGCTCAA
CCGGCGCGCGCCCGATCCGACATCGGCGGTGGTGCTGTGGCAGATCGGCG
TCTTCGGATTCGCCACCCACAAGCAGGGCGAGTACGCGTTGCCTGCCATG
CCGATCCTGATCGAGAAGCTCGAGCGCATCTACGGCCCGGCCCACCCGAT
GTTTCTCTACGATGGCGCGGTGCTGCCGGGTGTCCAGTCGATCATCCGCC
AGATCGTCGCGGCCAACCTGATGACCGAGCCGCTCTCGGCCGCCTACACG
CTCTACATCCCGCCCGTGCGCGCCGCCGACCCTGATATGGACGCCTACAA
TCGCATGATCGCGCTCAACGCGGCGTACAAGGAAGTGGAAGAGGGATGA
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