mRNA_P-wetherbeei_contig17691.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17691.1.1
Unique NamemRNA_P-wetherbeei_contig17691.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17691.1.1 vs. uniprot
Match: A0A3C0TUF0_9PROT (UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TUF0_9PROT)

HSP 1 Score: 219 bits (559), Expect = 1.280e-69
Identity = 107/127 (84.25%), Postives = 116/127 (91.34%), Query Frame = 1
Query:    1 VEDVPRAMTNRYGILDVASDDGVLVKVKGFVEKPDPSAAPSTLSIIGRYILEPQIFDYLARQQRGAGNEIQLTDAMAAMLATGAYFGMRYEGVRYDCGDKLGFLKANVALALDRPDLASGLRDFLKE 381
            VEDVPRA TNRYGILDV SDDG LVKV+GFVEKPD + APST+SIIGRYIL+PQIFDYLA+QQRGAGNEIQLTDAMAAML TGAY GMRYEG RYDCGDKLGFLKAN+A ALDR DL +GLRDF++E
Sbjct:  161 VEDVPRAFTNRYGILDVESDDGRLVKVRGFVEKPDSAVAPSTMSIIGRYILQPQIFDYLAKQQRGAGNEIQLTDAMAAMLETGAYHGMRYEGRRYDCGDKLGFLKANIAFALDRDDLGAGLRDFIRE 287          
BLAST of mRNA_P-wetherbeei_contig17691.1.1 vs. uniprot
Match: A0A2M7GSI4_9PROT (UTP--glucose-1-phosphate uridylyltransferase (Fragment) n=1 Tax=Rhodospirillales bacterium CG15_BIG_FIL_POST_REV_8_21_14_020_66_15 TaxID=1974092 RepID=A0A2M7GSI4_9PROT)

HSP 1 Score: 172 bits (437), Expect = 5.630e-53
Identity = 83/126 (65.87%), Postives = 102/126 (80.95%), Query Frame = 1
Query:    1 VEDVPRAMTNRYGILDVASDDGVLVKVKGFVEKPDPSAAPSTLSIIGRYILEPQIFDYLARQQRGAGNEIQLTDAMAAMLATGAYFGMRYEGVRYDCGDKLGFLKANVALALDRPDLASGLRDFLK 378
            VEDVPR  T+RYGILDVA D G LV+ KG VEKPDP+ APSTLSIIGRYIL+P++F++LA+ ++GAG EIQLTDAMA  L T  + G+R+EG R+DCG K GF++ANVA A+ RPDLA  LR+ LK
Sbjct:   23 VEDVPRDQTDRYGILDVAEDSGRLVRAKGLVEKPDPAVAPSTLSIIGRYILQPEVFEHLAKHEKGAGGEIQLTDAMAKTLDTVPFHGLRFEGRRFDCGSKAGFIEANVAFAMARPDLAEQLREALK 148          
BLAST of mRNA_P-wetherbeei_contig17691.1.1 vs. uniprot
Match: A0A5A7NF25_9PROT (UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Kordiimonadales bacterium JCM 17843 TaxID=1236965 RepID=A0A5A7NF25_9PROT)

HSP 1 Score: 171 bits (433), Expect = 3.130e-52
Identity = 84/130 (64.62%), Postives = 101/130 (77.69%), Query Frame = 1
Query:    1 VEDVPRAMTNRYGILDVASDDGVLVKVKGFVEKPDPSAAPSTLSIIGRYILEPQIFDYLARQQRGAGNEIQLTDAMAAMLATGAYFGMRYEGVRYDCGDKLGFLKANVALALDRPDLASGLRDFLKEIKV 390
            V DVPR  T+RYGILDV + DG L +VKG VEKP P  APSTLSIIGRYIL+P IFD L R++RGAG EIQLTDAMA ++    + G+R+EG RYDCGDKLGFLKA ++LAL+R DL S L D+LK + +
Sbjct:   32 VMDVPRDHTSRYGILDVGAVDGALSEVKGLVEKPKPQDAPSTLSIIGRYILQPDIFDALERKERGAGGEIQLTDAMARLIGHQPFHGLRFEGTRYDCGDKLGFLKATISLALEREDLGSDLADYLKSLSL 161          
BLAST of mRNA_P-wetherbeei_contig17691.1.1 vs. uniprot
Match: A0A2U1VCC0_9PROT (UTP--glucose-1-phosphate uridylyltransferase n=2 Tax=Azospirillum TaxID=191 RepID=A0A2U1VCC0_9PROT)

HSP 1 Score: 173 bits (438), Expect = 2.450e-51
Identity = 83/127 (65.35%), Postives = 99/127 (77.95%), Query Frame = 1
Query:    1 VEDVPRAMTNRYGILDVASDDGVLVKVKGFVEKPDPSAAPSTLSIIGRYILEPQIFDYLARQQRGAGNEIQLTDAMAAMLATGAYFGMRYEGVRYDCGDKLGFLKANVALALDRPDLASGLRDFLKE 381
            V DVPR  T RYGILDV SDDG L KV+G VEKP P  APSTLSIIGRYIL P++FD+L  QQ GAG EIQLTDAMA ++ T  + G+R+EG RYDCGDK+GF++A +A AL RPDL+  +RD LK+
Sbjct:  161 VVDVPREHTRRYGILDVESDDGRLAKVRGLVEKPKPEEAPSTLSIIGRYILMPEVFDHLENQQTGAGGEIQLTDAMAKLIGTQPFHGLRFEGTRYDCGDKIGFVEATIAYALSRPDLSDKVRDLLKK 287          
BLAST of mRNA_P-wetherbeei_contig17691.1.1 vs. uniprot
Match: A0A7U7AZ09_9PROT (UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Rhodospirillaceae bacterium LM-1 TaxID=2682548 RepID=A0A7U7AZ09_9PROT)

HSP 1 Score: 172 bits (437), Expect = 6.800e-51
Identity = 83/130 (63.85%), Postives = 97/130 (74.62%), Query Frame = 1
Query:    1 VEDVPRAMTNRYGILDVASDDGVLVKVKGFVEKPDPSAAPSTLSIIGRYILEPQIFDYLARQQRGAGNEIQLTDAMAAMLATGAYFGMRYEGVRYDCGDKLGFLKANVALALDRPDLASGLRDFLKEIKV 390
            V DVPR  T RYGILDV  DDG L + KG VEKP+P  APSTLSIIGRYIL P++FDYL  QQRGAG E+QLTDAMA  +    + G+R+EG R+DCGDK+GFL ANV   LDRPDLA   R+ LK I++
Sbjct:  185 VMDVPREHTKRYGILDVEKDDGKLARAKGLVEKPEPDVAPSTLSIIGRYILHPKVFDYLELQQRGAGGEVQLTDAMAKTIGQVPFHGLRFEGQRFDCGDKVGFLAANVVYGLDRPDLADEFREVLKSIEI 314          
BLAST of mRNA_P-wetherbeei_contig17691.1.1 vs. uniprot
Match: A0A1G7ZI95_9PROT (UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Roseospirillum parvum TaxID=83401 RepID=A0A1G7ZI95_9PROT)

HSP 1 Score: 172 bits (435), Expect = 7.550e-51
Identity = 85/128 (66.41%), Postives = 97/128 (75.78%), Query Frame = 1
Query:    1 VEDVPRAMTNRYGILDVASDDGVLVKVKGFVEKPDPSAAPSTLSIIGRYILEPQIFDYLARQQRGAGNEIQLTDAMAAMLATGAYFGMRYEGVRYDCGDKLGFLKANVALALDRPDLASGLRDFLKEI 384
            VEDVPR  TNRYGILDV SDDG L +  G VEKP P  APSTL+IIGRY+L P IF  L RQ+ GAGNEIQLTDAMAA L T  + G R++G R+DCGDK GF+KA V+ ALDRPDL  G+  +LKEI
Sbjct:  161 VEDVPREHTNRYGILDVKSDDGRLAEAAGLVEKPRPEVAPSTLAIIGRYVLTPDIFPMLERQEPGAGNEIQLTDAMAATLGTIPFHGTRFDGTRFDCGDKTGFIKATVSFALDRPDLRDGVAAYLKEI 288          
BLAST of mRNA_P-wetherbeei_contig17691.1.1 vs. uniprot
Match: A0A2E9XYY4_9PROT (UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E9XYY4_9PROT)

HSP 1 Score: 171 bits (434), Expect = 9.320e-51
Identity = 82/128 (64.06%), Postives = 99/128 (77.34%), Query Frame = 1
Query:    1 VEDVPRAMTNRYGILDVASDDGVLVKVKGFVEKPDPSAAPSTLSIIGRYILEPQIFDYLARQQRGAGNEIQLTDAMAAMLATGAYFGMRYEGVRYDCGDKLGFLKANVALALDRPDLASGLRDFLKEI 384
            V DVPR  T RYGILDV SDDG L +V+G VEKPDP  APSTLS+IGRYIL P++F+YL R+++GAG EIQLTDAMA ++    + G+R+EG R+DCGDKLGFLKA VA  LDR DL  GL  +L +I
Sbjct:  159 VMDVPREHTARYGILDVGSDDGHLAEVRGLVEKPDPVEAPSTLSVIGRYILMPEVFEYLGRKEKGAGGEIQLTDAMAQLIGAQPFHGLRFEGTRFDCGDKLGFLKATVAFGLDRDDLREGLGKYLSDI 286          
BLAST of mRNA_P-wetherbeei_contig17691.1.1 vs. uniprot
Match: A0A5A7MU38_9PROT (UTP--glucose-1-phosphate uridylyltransferase n=3 Tax=Iodidimonas TaxID=2066486 RepID=A0A5A7MU38_9PROT)

HSP 1 Score: 171 bits (434), Expect = 1.010e-50
Identity = 84/130 (64.62%), Postives = 101/130 (77.69%), Query Frame = 1
Query:    1 VEDVPRAMTNRYGILDVASDDGVLVKVKGFVEKPDPSAAPSTLSIIGRYILEPQIFDYLARQQRGAGNEIQLTDAMAAMLATGAYFGMRYEGVRYDCGDKLGFLKANVALALDRPDLASGLRDFLKEIKV 390
            V DVPR  TNRYGILDV + DG L +VKG VEKP P  APSTLSIIGRYIL+P IF+ L R++RGAG EIQLTDAMA ++    + G+R+EG RYDCGDKLGFLKA ++LAL+R DL S L D+LK + +
Sbjct:  161 VMDVPRDHTNRYGILDVGAVDGALSEVKGLVEKPKPQDAPSTLSIIGRYILQPDIFEALERKERGAGGEIQLTDAMARLIGHQPFHGLRFEGTRYDCGDKLGFLKATISLALEREDLGSDLADYLKSLSL 290          
BLAST of mRNA_P-wetherbeei_contig17691.1.1 vs. uniprot
Match: W9H6D3_9PROT (UTP--glucose-1-phosphate uridylyltransferase n=6 Tax=Skermanella TaxID=204447 RepID=W9H6D3_9PROT)

HSP 1 Score: 170 bits (431), Expect = 2.790e-50
Identity = 80/128 (62.50%), Postives = 102/128 (79.69%), Query Frame = 1
Query:    1 VEDVPRAMTNRYGILDVASDDGVLVKVKGFVEKPDPSAAPSTLSIIGRYILEPQIFDYLARQQRGAGNEIQLTDAMAAMLATGAYFGMRYEGVRYDCGDKLGFLKANVALALDRPDLASGLRDFLKEI 384
            V DVPR  TNRYGILDVASDDG L  VKG VEKP P  APSTLSIIGRYIL+P++F +L RQ++GAGNEIQLTD+MA ++    + G+R+ G RYDCGD++GFL+AN+A AL+RPD+   +R+ L ++
Sbjct:  161 VVDVPREHTNRYGILDVASDDGRLAAVKGLVEKPKPEVAPSTLSIIGRYILQPEVFGHLDRQEKGAGNEIQLTDSMARLIGEQPFHGLRFTGTRYDCGDRVGFLEANIAFALERPDIGPLVREALAKL 288          
BLAST of mRNA_P-wetherbeei_contig17691.1.1 vs. uniprot
Match: A0A2E3P770_9PROT (UTP--glucose-1-phosphate uridylyltransferase n=7 Tax=Rhodospirillales TaxID=204441 RepID=A0A2E3P770_9PROT)

HSP 1 Score: 170 bits (430), Expect = 3.940e-50
Identity = 83/126 (65.87%), Postives = 100/126 (79.37%), Query Frame = 1
Query:    1 VEDVPRAMTNRYGILDVASDDGVLVKVKGFVEKPDPSAAPSTLSIIGRYILEPQIFDYLARQQRGAGNEIQLTDAMAAMLATGAYFGMRYEGVRYDCGDKLGFLKANVALALDRPDLASGLRDFLK 378
            VEDVP   TN+YGILDVA DDG L + KG VEKPDPS APSTLSIIGRYIL+PQ+F++L R ++GAG EIQLTDAMA  L T  + G+R++G R+DCG K GF++ANVA AL+RPDLA  +R  LK
Sbjct:  161 VEDVPLEDTNKYGILDVAEDDGRLARAKGLVEKPDPSVAPSTLSIIGRYILQPQVFEHLDRHEKGAGGEIQLTDAMAKTLDTVPFHGLRFKGRRFDCGSKAGFIEANVAFALERPDLADRVRATLK 286          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17691.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TUF0_9PROT1.280e-6984.25UTP--glucose-1-phosphate uridylyltransferase n=1 T... [more]
A0A2M7GSI4_9PROT5.630e-5365.87UTP--glucose-1-phosphate uridylyltransferase (Frag... [more]
A0A5A7NF25_9PROT3.130e-5264.62UTP--glucose-1-phosphate uridylyltransferase n=1 T... [more]
A0A2U1VCC0_9PROT2.450e-5165.35UTP--glucose-1-phosphate uridylyltransferase n=2 T... [more]
A0A7U7AZ09_9PROT6.800e-5163.85UTP--glucose-1-phosphate uridylyltransferase n=1 T... [more]
A0A1G7ZI95_9PROT7.550e-5166.41UTP--glucose-1-phosphate uridylyltransferase n=1 T... [more]
A0A2E9XYY4_9PROT9.320e-5164.06UTP--glucose-1-phosphate uridylyltransferase n=1 T... [more]
A0A5A7MU38_9PROT1.010e-5064.62UTP--glucose-1-phosphate uridylyltransferase n=3 T... [more]
W9H6D3_9PROT2.790e-5062.50UTP--glucose-1-phosphate uridylyltransferase n=6 T... [more]
A0A2E3P770_9PROT3.940e-5065.87UTP--glucose-1-phosphate uridylyltransferase n=7 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17691contigP-wetherbeei_contig17691:1..393 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1457393.AZ09_02330
Preferred nameexoN
PFAMsNTP_transferase
Model size393
Max annot lvl204441|Rhodospirillales
KEGG rclassRC00002
KEGG koko:K00963
KEGG ReactionR00289
KEGG Pathwayko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130
KEGG ModuleM00129,M00361,M00362,M00549
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.29e-48
EggNOG OGsCOG1210@1|root,COG1210@2|Bacteria,1MV5F@1224|Proteobacteria,2TRT6@28211|Alphaproteobacteria,2JPPP@204441|Rhodospirillales
EC2.7.7.9
DescriptionUTP--glucose-1-phosphate uridylyltransferase
Cds size372
COG categoryM
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186123.431356-UTR-P-wetherbeei_contig17691:0..211683186123.431356-UTR-P-wetherbeei_contig17691:0..21Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig17691 1..21 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186123.442737-CDS-P-wetherbeei_contig17691:21..3931683186123.442737-CDS-P-wetherbeei_contig17691:21..393Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17691 22..393 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17691.1.1prot_P-wetherbeei_contig17691.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17691 22..393 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17691.1.1

>prot_P-wetherbeei_contig17691.1.1 ID=prot_P-wetherbeei_contig17691.1.1|Name=mRNA_P-wetherbeei_contig17691.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=124bp
MTNRYGILDVASDDGVLVKVKGFVEKPDPSAAPSTLSIIGRYILEPQIFD
YLARQQRGAGNEIQLTDAMAAMLATGAYFGMRYEGVRYDCGDKLGFLKAN
VALALDRPDLASGLRDFLKEIKV*
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mRNA from alignment at P-wetherbeei_contig17691:1..393+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17691.1.1 ID=mRNA_P-wetherbeei_contig17691.1.1|Name=mRNA_P-wetherbeei_contig17691.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=393bp|location=Sequence derived from alignment at P-wetherbeei_contig17691:1..393+ (Phaeothamnion wetherbeei SAG_119_79)
GTGGAAGACGTGCCGCGTGCGATGACCAATCGATATGGCATTCTGGATGT GGCGTCCGACGATGGCGTCCTTGTGAAGGTGAAGGGCTTCGTGGAAAAGC CCGATCCTTCGGCCGCTCCCTCCACCCTGTCCATCATTGGCCGCTATATT CTGGAGCCACAGATTTTTGATTATCTGGCCCGGCAGCAGCGTGGTGCGGG CAATGAAATTCAGCTTACGGACGCCATGGCGGCCATGCTTGCGACCGGGG CCTATTTTGGCATGCGGTATGAAGGGGTGCGCTATGATTGCGGCGACAAG CTGGGGTTTCTCAAGGCGAATGTGGCGCTGGCGCTGGACCGGCCGGATTT GGCGTCCGGGCTTCGGGATTTTCTTAAGGAAATCAAAGTATAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17691:1..393+

>mRNA_P-wetherbeei_contig17691.1.1 ID=mRNA_P-wetherbeei_contig17691.1.1|Name=mRNA_P-wetherbeei_contig17691.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=372bp|location=Sequence derived from alignment at P-wetherbeei_contig17691:1..393+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACCAATCGATATGGCATTCTGGATGTGGCGTCCGACGATGGCGTCCT
TGTGAAGGTGAAGGGCTTCGTGGAAAAGCCCGATCCTTCGGCCGCTCCCT
CCACCCTGTCCATCATTGGCCGCTATATTCTGGAGCCACAGATTTTTGAT
TATCTGGCCCGGCAGCAGCGTGGTGCGGGCAATGAAATTCAGCTTACGGA
CGCCATGGCGGCCATGCTTGCGACCGGGGCCTATTTTGGCATGCGGTATG
AAGGGGTGCGCTATGATTGCGGCGACAAGCTGGGGTTTCTCAAGGCGAAT
GTGGCGCTGGCGCTGGACCGGCCGGATTTGGCGTCCGGGCTTCGGGATTT
TCTTAAGGAAATCAAAGTATAA
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