mRNA_P-wetherbeei_contig17676.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17676.1.1 vs. uniprot
Match: A0A1F4FFR9_9PROT (Uncharacterized protein n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4FFR9_9PROT) HSP 1 Score: 256 bits (653), Expect = 6.230e-79 Identity = 133/272 (48.90%), Postives = 181/272 (66.54%), Query Frame = 3
Query: 576 RMLVALVALFALSGCTALQLGYNNADTLIQWRAGKYFGFEGEQKAELERRVQRFLAWHRKTELPRYSALANGLADRLARGVSQADLVWGYDSFQTLLRQSLVAGAGEAAELLDVLSAAQVGRFVERLEKENRDHAKDYALADPPAERRAKRTRRNLERLEDWFGALSEAQADRVRLYSARAPLDDELRDRDRKRMQRELTAMFRARDARQKLVPWAMAWDQNRDPAYEAMRKDNLREYFGMLMDLDRTLSPEQRERAVRRLRGFAGDFSALV 1391
R + + L AL GC+ ++ Y+NAD ++W+A YF F GEQ EL+ R+ FLAWHR LP+Y+ LA + R+ RGV + DL WGYD+ Q +R++L A A EAA LLD+L A Q+ F +RL +ENR AK+ + +R+ +R +RN+ERLE+WFG+LS+AQ +RVR YSARAP +LR+RDRKR Q EL AM RAR+A+Q+L WA AWD R+ AY + L EYF +L+DLDR L+ EQRE A RL+ +A +L
Sbjct: 4 RAVFVFLLLAALQGCSVTRIAYDNADVFLRWQANSYFDFRGEQSEELDHRLAAFLAWHRAKALPQYAQLAEDASARMLRGVKREDLEWGYDAVQAQIREALGAAAAEAAGLLDLLGADQITHFEQRLAEENRKFAKEQ-VQGTVEQRQQRRVKRNVERLEEWFGSLSDAQLERVRRYSARAPFSADLRERDRKRRQAELLAMLRAREAKQRLARWAGAWDSGRERAYAEAARATLAEYFDLLLDLDRMLTLEQREHAAMRLKRYASLSESLA 274
BLAST of mRNA_P-wetherbeei_contig17676.1.1 vs. uniprot
Match: A0A1F4F5F6_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 TaxID=1797505 RepID=A0A1F4F5F6_9PROT) HSP 1 Score: 256 bits (653), Expect = 8.590e-79 Identity = 134/272 (49.26%), Postives = 181/272 (66.54%), Query Frame = 3
Query: 576 RMLVALVALFALSGCTALQLGYNNADTLIQWRAGKYFGFEGEQKAELERRVQRFLAWHRKTELPRYSALANGLADRLARGVSQADLVWGYDSFQTLLRQSLVAGAGEAAELLDVLSAAQVGRFVERLEKENRDHAKDYALADPPAERRAKRTRRNLERLEDWFGALSEAQADRVRLYSARAPLDDELRDRDRKRMQRELTAMFRARDARQKLVPWAMAWDQNRDPAYEAMRKDNLREYFGMLMDLDRTLSPEQRERAVRRLRGFAGDFSALV 1391
R+ +A A + SGC+ LQ+ Y NAD L++WR Y +G + +LE + FLAWHR LP+Y+ +A+ +R+ARG+S+ DLVWGYD F R+SL A A A LLD L+ QV R R ++NR+ A+++ LA P ERR +R +R +ERLE W G+LSEAQA+RVR YS RAPL DELRDR R+R Q +M RAR+ +++L WA WD +R+PAY A + +L EYF ML++LDR LS EQR +AV R R FA DF++L
Sbjct: 6 RLALAAAAAWLASGCSTLQITYENADLLLRWRLTSYLELQGAEAEQLEGGIASFLAWHRADALPQYARVADEAGERVARGISRDDLVWGYDIFLAQARESLRAAADRIAPLLDRLTPEQVARVERRFAEDNREFAQEF-LAGTPGERRKRRLQRTVERLEGWVGSLSEAQAERVRRYSERAPLVDELRDRYRRRRQAGFVSMLRAREVQRRLTDWAARWDSDREPAYAAASRAHLEEYFSMLLELDRMLSAEQRAKAVARFRSFAEDFTSLA 276
BLAST of mRNA_P-wetherbeei_contig17676.1.1 vs. uniprot
Match: A0A522VTD5_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A522VTD5_9PROT) HSP 1 Score: 243 bits (620), Expect = 5.230e-74 Identity = 128/274 (46.72%), Postives = 174/274 (63.50%), Query Frame = 3
Query: 570 VRRMLVALVALFALSGCTALQLGYNNADTLIQWRAGKYFGFEGEQKAELERRVQRFLAWHRKTELPRYSALANGLADRLARGVSQADLVWGYDSFQTLLRQSLVAGAGEAAELLDVLSAAQVGRFVERLEKENRDHAKDYALADPPAERRAKRTRRNLERLEDWFGALSEAQADRVRLYSARAPLDDELRDRDRKRMQRELTAMFRARDARQKLVPWAMAWDQNRDPAYEAMRKDNLREYFGMLMDLDRTLSPEQRERAVRRLRGFAGDFSALV 1391
+RR+ + L AL L+GC+A + Y +AD ++W+ G+Y G Q EL+ R+ FLAWHR LP+Y+ A R ARG+S+ADLVWGYDSFQ+ +R ++ A A E+A LLD L Q+ +R ++NR A++ D ERR +RT RNLERLE W G LS+AQ +RVR YS RAPL +RDR+R+R+Q E + RAR+A Q+L WA WD+ R+ A+ A + NL E F ML+DL+RTL+ QRE A R +A DF L
Sbjct: 1 MRRLALVLAALALLAGCSATRFAYEHADVFLRWQTGRYLDVHGAQSEELDARIAAFLAWHRAKALPQYAQFAREAEQRFARGISRADLVWGYDSFQSNIRAAMRAAAEESAPLLDRLGPEQIEHLRQRFAEDNRKFAREQLEGDE-GERRKRRTGRNLERLEGWLGGLSDAQVERVRRYSERAPLVGAMRDRERRRLQAEFLDLLRAREAVQRLPDWAQRWDRGREAAFVAAHRANLDELFAMLLDLERTLTLAQRESARARFLDYAADFERLA 273
BLAST of mRNA_P-wetherbeei_contig17676.1.1 vs. uniprot
Match: A0A521YPW4_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521YPW4_9PROT) HSP 1 Score: 236 bits (603), Expect = 2.560e-71 Identity = 130/274 (47.45%), Postives = 170/274 (62.04%), Query Frame = 3
Query: 570 VRRMLVALVALFALSGCTALQLGYNNADTLIQWRAGKYFGFEGEQKAELERRVQRFLAWHRKTELPRYSALANGLADRLARGVSQADLVWGYDSFQTLLRQSLVAGAGEAAELLDVLSAAQVGRFVERLEKENRDHAKDYALADPPAERRAKRTRRNLERLEDWFGALSEAQADRVRLYSARAPLDDELRDRDRKRMQRELTAMFRARDARQKLVPWAMAWDQNRDPAYEAMRKDNLREYFGMLMDLDRTLSPEQRERAVRRLRGFAGDFSALV 1391
V ++ +AL A L CTAL++ Y NADT + WR+G Y + ++ EL R+ F WHR ELP+Y+ +A+ A RL G+S+ DLVWGYDS RQSL AG A LLD L+ QV + ++NR A++ L ERR +R ++ ERLEDW G L+ AQ +RVR YS RAPL DELRDRDRKR+Q E+ M R R A+Q+L A WD+ RDPAY A + +EYF +L+DLDRTL+ EQR RA+ L +A DF L
Sbjct: 4 VPKVTLALAAACMLVACTALRVAYENADTYLHWRSGSYLDLDRKESQELAERIDAFFTWHRAQELPQYARIADEAAQRLDDGLSREDLVWGYDSLVAHARQSLRVAAGRIAPLLDGLTPQQVAHLEKGFAEDNRKFAREN-LRGSEKERRKRRAKKVEERLEDWVGNLTHAQVERVRQYSERAPLYDELRDRDRKRLQAEVLEMVRQRAAQQRLADLAAHWDRGRDPAYAAASEKARQEYFALLLDLDRTLTREQRVRAIANLERYAEDFKVLA 276
BLAST of mRNA_P-wetherbeei_contig17676.1.1 vs. uniprot
Match: A0A1F4E5E7_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_67_28 TaxID=1797503 RepID=A0A1F4E5E7_9PROT) HSP 1 Score: 236 bits (602), Expect = 2.640e-71 Identity = 129/272 (47.43%), Postives = 174/272 (63.97%), Query Frame = 3
Query: 576 RMLVALVALFALSGCTALQLGYNNADTLIQWRAGKYFGFEGEQKAELERRVQRFLAWHRKTELPRYSALANGLADRLARGVSQADLVWGYDSFQTLLRQSLVAGAGEAAELLDVLSAAQVGRFVERLEKENRDHAKDYALADPPAERRAKRTRRNLERLEDWFGALSEAQADRVRLYSARAPLDDELRDRDRKRMQRELTAMFRARDARQKLVPWAMAWDQNRDPAYEAMRKDNLREYFGMLMDLDRTLSPEQRERAVRRLRGFAGDFSALV 1391
R+ +L+AL L+GC+A +L Y++AD L++WRA +Y G Q EL+ RV FLAWHR LP Y+ A RLAR +S+ADLVW YDS T +R ++ A A E+A LLD L Q+ +R +NR AK+ D ERR +R +RN+ERLE+W G LS+AQ +RVR YS RAPL +RDR+R+R+Q E AM RAR+A ++L WA W+++R+ A+ A + N F +L+DLDR L+P QRE A RLR FA DF L
Sbjct: 3 RLWRSLLALALLAGCSATRLAYDHADLLLRWRAERYLDVHGAQSEELDARVAAFLAWHRAHALPLYARFAREAESRLARELSRADLVWSYDSLHTHIRAAMRAAAEESAPLLDRLGPEQIEHVQQRFADDNRKFAKEQLEGDD-GERRKRRVKRNVERLEEWLGGLSDAQVERVRQYSERAPLVGAMRDRERRRLQAEFLAMLRAREAGKRLADWAEHWERHREAAFVAAHRANRDALFDLLLDLDRMLTPAQRESAQARLREFAVDFERLA 273
BLAST of mRNA_P-wetherbeei_contig17676.1.1 vs. uniprot
Match: A0A0S8BCT3_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium SG8_39 TaxID=1703390 RepID=A0A0S8BCT3_9PROT) HSP 1 Score: 233 bits (593), Expect = 7.460e-70 Identity = 126/276 (45.65%), Postives = 173/276 (62.68%), Query Frame = 3
Query: 576 RMLVALVALFALSGCTALQLGYNNADTLIQWRAGKYFGFEGEQKAELERRVQRFLAWHRKTELPRYSALANGLADRLARGVSQADLVWGYDSFQTLLRQSLVAGAGEAAELLDVLSAAQVGRFVERLEKENRDHAKDYALADPPAERRAKRTRRNLERLEDWFGALSEAQADRVRLYSARAPLDDELRDRDRKRMQRELTAMFRARDARQKLVPWAMAWDQNRDPAYEAMRKDNLREYFGMLMDLDRTLSPEQRERAVRRLRGFAGDFSALVAAAG 1403
R ++A +AL AL+GC+A Q+ Y+N TL++WRA Y G Q L++R+++FLAWHR LP+Y+ALA A R+ RG+++ADL WGYD+F+ L + L A A E A +LD L+ Q+ +R+E++N A + D A RR +R RN+ RLE+WFGAL+ Q D VR Y+ APL LR +DR+R Q EL + R R A+++LV WA WD+ R PAY + +L YF ML+ +DRTLS EQR R R FA DF L A G
Sbjct: 5 RDVLAGLALLALAGCSATQVVYDNGATLLRWRATSYLDVHGAQSKALDQRIEKFLAWHRSAALPKYAALAESCARRVERGLTRADLEWGYDAFRAELDEGLRAAARELAPILDGLTPEQIAHLAQRIEEDNETFAHEQLDGDE-AGRRRRRMERNVTRLEEWFGALTATQRDAVRRYTESAPLVGALRAQDRRRRQAELLTILRTRSAQRRLVDWAAGWDRGRAPAYAKASRVHLEAYFDMLLAIDRTLSAEQRAATATRFRRFAQDFEQLARADG 279
BLAST of mRNA_P-wetherbeei_contig17676.1.1 vs. uniprot
Match: A0A1F4EH04_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14 TaxID=1797501 RepID=A0A1F4EH04_9PROT) HSP 1 Score: 232 bits (591), Expect = 1.580e-69 Identity = 128/277 (46.21%), Postives = 176/277 (63.54%), Query Frame = 3
Query: 570 VRRMLVALVALFALSGCTALQLGYNNADTLIQWRAGKYFGFEGEQKAELERRVQRFLAWHRKTELPRYSALANGLADRLARGVSQADLVWGYDSFQTLLRQSLVAGAGEAAELLDVLSAAQVGRFVERLEKENRDHAKDYALADPPAERRAKRTRRNLERLEDWFGALSEAQADRVRLYSARAPLDDELRDRDRKRMQRELTAMFRARDARQKLVPWAMAWDQNRDPAYEAMRKDNLREYFGMLMDLDRTLSPEQRERAVRRLRGFAGDFSALVAAA 1400
V ++ +ALVA + L+GCTAL++ Y NADT + WR+G Y + ++ EL R+ F AWHR LP+Y+ +A+ A RL G+S+ DLVWGYDS RQSL A A LLD L+ Q+ + ++NR A++ L ERR +R +R ERLEDW G L++AQ +RV+ YS RAPL DELR+RDRKR+Q E+ M R R+A ++L A W++ RDPAY A + +EYF +L+DLDRTL+ EQR RA+ L +A DF L + A
Sbjct: 4 VLKVTLALVAAWMLAGCTALRVAYENADTYLYWRSGAYLDLDRKESQELAERIDAFFAWHRVQALPQYARVADEAAKRLDDGLSREDLVWGYDSLVAHARQSLRVAAERIAPLLDRLTPQQMAHLEKGFAEDNRKFAREN-LRGGEKERRRRRAKRVEERLEDWVGNLTQAQVERVKQYSERAPLYDELRERDRKRLQAEVLQMVRLREAHKRLPELAARWERGRDPAYAAAAEAARQEYFALLLDLDRTLTHEQRVRAIAHLERYAEDFKILASRA 279
BLAST of mRNA_P-wetherbeei_contig17676.1.1 vs. uniprot
Match: A0A537AM72_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537AM72_9PROT) HSP 1 Score: 231 bits (589), Expect = 1.840e-69 Identity = 123/261 (47.13%), Postives = 170/261 (65.13%), Query Frame = 3
Query: 609 LSGCTALQLGYNNADTLIQWRAGKYFGFEGEQKAELERRVQRFLAWHRKTELPRYSALANGLADRLARGVSQADLVWGYDSFQTLLRQSLVAGAGEAAELLDVLSAAQVGRFVERLEKENRDHAKDYALADPPAERRAKRTRRNLERLEDWFGALSEAQADRVRLYSARAPLDDELRDRDRKRMQRELTAMFRARDARQKLVPWAMAWDQNRDPAYEAMRKDNLREYFGMLMDLDRTLSPEQRERAVRRLRGFAGDFSALV 1391
LSGC+ ++L Y+NA+T ++WRA Y FEG EL+ R+ F+AWHR LP+Y+ +A+ R R + ADLVWGYDS R+SL A A + A LLD L+ Q+ RL ++NR ++ L ERR +RT RN+ERLEDW G LS+AQ +RV+ YS RAPL D+LRDRD KR+Q E A+ RA++A+++L WA +D+ R+PAY A + + +EYF M ++LDR+LS +QR RA LR +A DF L
Sbjct: 6 LSGCSTVRLVYDNAETYLRWRAALYLDFEGAMAEELDERIAAFMAWHRAQALPKYAQIADEATRRFERRLQPADLVWGYDSIIAQARESLRAAAVQGAPLLDQLTPQQITHLERRLGEDNRRFQREN-LRGSERERRRRRTERNVERLEDWVGRLSQAQLERVKQYSERAPLLDDLRDRDHKRIQAEFLAIVRAKEAKKRLPDWAANYDRGREPAYVAAVEASRKEYFAMALELDRSLSAQQRARAAGELRRYADDFRTLA 265
BLAST of mRNA_P-wetherbeei_contig17676.1.1 vs. uniprot
Match: A0A537EF21_9PROT (Uncharacterized protein n=3 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537EF21_9PROT) HSP 1 Score: 231 bits (588), Expect = 4.420e-69 Identity = 131/272 (48.16%), Postives = 169/272 (62.13%), Query Frame = 3
Query: 576 RMLVALVALFALSGCTALQLGYNNADTLIQWRAGKYFGFEGEQKAELERRVQRFLAWHRKTELPRYSALANGLADRLARGVSQADLVWGYDSFQTLLRQSLVAGAGEAAELLDVLSAAQVGRFVERLEKENRDHAKDYALADPPAERRAKRTRRNLERLEDWFGALSEAQADRVRLYSARAPLDDELRDRDRKRMQRELTAMFRARDARQKLVPWAMAWDQNRDPAYEAMRKDNLREYFGMLMDLDRTLSPEQRERAVRRLRGFAGDFSALV 1391
R+ LV L L+GC+A +L Y++ADT ++WRAG Y GEQ EL+ R+ F WHR T LP+Y+ L A RL G+S+ D+VWGYDS R+ L A A A +LD LS QV R +E+ E+ AERR +R R +ERLEDW G LS+AQ +RVR +S RAPL E+RDRDRKR+Q EL AM RAR+A+++L A +D RDPAY A + +EYF +L+DLDRTLS EQR AV R +A DF+ L
Sbjct: 6 RLSAILVTLSLLAGCSATRLAYDHADTWLRWRAGNYLDVHGEQAEELDERIDAFHDWHRATALPKYARLCEEAARRLGGGLSREDIVWGYDSLMAQAREGLRAAAERIAPMLDRLSPEQV-RHMEKRFAEDXXXXXXXXXXGSEAERRKRRATRTVERLEDWVGRLSKAQIERVRQFSERAPLYYEMRDRDRKRLQGELLAMVRAREAQKRLPERAANFDHGRDPAYAAASEAARQEYFALLLDLDRTLSAEQRAEAVATFRRYADDFTLLA 276
BLAST of mRNA_P-wetherbeei_contig17676.1.1 vs. uniprot
Match: A0A1F4CYF2_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_19 TaxID=1797504 RepID=A0A1F4CYF2_9PROT) HSP 1 Score: 227 bits (578), Expect = 9.690e-68 Identity = 128/274 (46.72%), Postives = 166/274 (60.58%), Query Frame = 3
Query: 579 MLVALVALFA--LSGCTALQLGYNNADTLIQWRAGKYFGFEGEQKAELERRVQRFLAWHRKTELPRYSALANGLADRLARGVSQADLVWGYDSFQTLLRQSLVAGAGEAAELLDVLSAAQVGRFVERLEKENRDHAKDYALADPPAERRAKRTRRNLERLEDWFGALSEAQADRVRLYSARAPLDDELRDRDRKRMQRELTAMFRARDARQKLVPWAMAWDQNRDPAYEAMRKDNLREYFGMLMDLDRTLSPEQRERAVRRLRGFAGDFSALVA 1394
M A LFA L GC+ ++ Y+NAD ++WRAG Y GEQ EL+ +Q FL WHR LP+Y+ LA+ A RL G+S DLVWGYDS R+SL A A LL+ L Q+ +RL +NR AK + L P +RR +R R +ERLEDW G LS+AQ RVR YS PL E+RDRD +R+Q L + RAR+A ++L + + W++ RDPAY + RE F ML++LDRTLSPEQRERA LR +A +F L A
Sbjct: 1 MRAAAALLFACLLCGCSMVRFAYDNADAYLRWRAGNYLDVHGEQADELDASIQAFLDWHRAQALPQYARLADEAAQRLGDGLSPQDLVWGYDSLVMQARESLRTAAERIAPLLERLDDEQIAHLEQRLADDNRRFAKQF-LRGPERKRRERRAERIVERLEDWVGRLSQAQRARVRRYSESVPLLPEMRDRDNRRLQAGLLELVRAREAEERLAQFVLDWERGRDPAYAQAVAASRRELFTMLLELDRTLSPEQRERASAHLRRYAAEFRLLAA 273 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17676.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17676.1.1 >prot_P-wetherbeei_contig17676.1.1 ID=prot_P-wetherbeei_contig17676.1.1|Name=mRNA_P-wetherbeei_contig17676.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=277bp MLVALVALFALSGCTALQLGYNNADTLIQWRAGKYFGFEGEQKAELERRVback to top mRNA from alignment at P-wetherbeei_contig17676:1..1409+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17676.1.1 ID=mRNA_P-wetherbeei_contig17676.1.1|Name=mRNA_P-wetherbeei_contig17676.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1409bp|location=Sequence derived from alignment at P-wetherbeei_contig17676:1..1409+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17676:1..1409+ >mRNA_P-wetherbeei_contig17676.1.1 ID=mRNA_P-wetherbeei_contig17676.1.1|Name=mRNA_P-wetherbeei_contig17676.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=831bp|location=Sequence derived from alignment at P-wetherbeei_contig17676:1..1409+ (Phaeothamnion wetherbeei SAG_119_79)back to top |