mRNA_P-wetherbeei_contig17651.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17651.1.1
Unique NamemRNA_P-wetherbeei_contig17651.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17651.1.1 vs. uniprot
Match: A0A1F8QCN8_9CHLR (Histidine kinase n=1 Tax=Chloroflexi bacterium RBG_16_54_18 TaxID=1797648 RepID=A0A1F8QCN8_9CHLR)

HSP 1 Score: 264 bits (675), Expect = 7.100e-79
Identity = 131/257 (50.97%), Postives = 187/257 (72.76%), Query Frame = 1
Query:    4 ENRHLVESLCSQAALALEHLRMADEVQRNQVLEATEKLQTALLNSVSHDLHTPLASLSGSLDMLADPDVELGADTRKSLLELAREQSGRLRRLVNNLLDMTRVEAGGLRLNIQPTEPADLIGAALEHCREVLEGATLKLEVADDLPTVPVDFVLMVQVLSNLIENAVKYSGENSQLEIAVSV-DEHFVIKVRDRGVGIPAVDLERIFERFYRVQAPDKVRGSGLGLSISKGIVECHGGTIRAANRSGGGTEVTIDMP 771
            E R L+E+   QAALA+E  ++A++ Q  Q+L+ATEKLQTALLNS+SHDL TPL S++G+L  L++  + + A   + L++ ARE++ R+ RLV NLL+MTR+EAG +R+  QP +  D IG ALE+  E L+   + + + +++P +P+DFVL+VQVL NLI+NA+KYS   S +EI   + D+   + V DRG+GIP  DLER+FE+FYR++ P+K+ G+GLGLSISKGI+E HGG I A NR GGGT +T  +P
Sbjct:  631 EQRRLLETFSRQAALAIERAQLAEQAQEAQLLQATEKLQTALLNSISHDLRTPLVSITGALSSLSEGGLAMDARVHQDLVDTAREEADRMNRLVGNLLNMTRLEAGAMRVTKQPGDMQDAIGTALENYEETLQERMVSVNIEENIPLIPMDFVLVVQVLVNLIDNALKYSPPGSPVEIQARLADQEMRVNVDDRGIGIPEDDLERVFEKFYRIERPEKISGTGLGLSISKGIIEAHGGRIWAENRLGGGTSITFSLP 887          
BLAST of mRNA_P-wetherbeei_contig17651.1.1 vs. uniprot
Match: A0A3N5HQD0_9BACT (Histidine kinase (Fragment) n=1 Tax=bacterium TaxID=1869227 RepID=A0A3N5HQD0_9BACT)

HSP 1 Score: 257 bits (656), Expect = 3.300e-78
Identity = 130/258 (50.39%), Postives = 184/258 (71.32%), Query Frame = 1
Query:    1 PENRHLVESLCSQAALALEHLRMADEVQRNQVLEATEKLQTALLNSVSHDLHTPLASLSGSLDMLADPDVELGADTRKSLLELAREQSGRLRRLVNNLLDMTRVEAGGLRLNIQPTEPADLIGAALEHCREVLEGATLKLEVADDLPTVPVDFVLMVQVLSNLIENAVKYSGENSQLEI-AVSVDEHFVIKVRDRGVGIPAVDLERIFERFYRVQAPDKVRGSGLGLSISKGIVECHGGTIRAANRSGGGTEVTIDMP 771
            P+ R L+E+   Q ALA+E  ++A++ +  Q+L+ATE+LQTALLNS+SHDL TPL S++G+L  L+D    +     + L++ AR+++ R+ RLV NLL+MTR+EAG +R+  QP +  D IG ALE+  + L    +   + +++P VP+DFVL+VQVL NL++NA+KYS   S +EI A  V +   + V DRG+GIPA DL++IFE+FYRVQ P+K+ G+GLGLSISKGIVE HGG I A NR GGGT +T  +P
Sbjct:  362 PDQRRLLETFSRQVALAIERAQLAEQAKEAQLLQATERLQTALLNSISHDLRTPLVSITGALSSLSDDGPSMDPQIHQDLVDTARDEADRMNRLVGNLLNMTRLEAGAMRVTKQPGDIQDAIGTALENLNDDLGERKVSFNIENNIPLVPMDFVLIVQVLVNLVDNALKYSELESPVEIQARQVGQEIYVSVNDRGIGIPAGDLKQIFEKFYRVQRPEKISGTGLGLSISKGIVEAHGGRIWAENRPGGGTTITFSLP 619          
BLAST of mRNA_P-wetherbeei_contig17651.1.1 vs. uniprot
Match: A0A1F8PU41_9CHLR (Histidine kinase n=1 Tax=Chloroflexi bacterium RBG_16_52_11 TaxID=1797646 RepID=A0A1F8PU41_9CHLR)

HSP 1 Score: 251 bits (642), Expect = 3.640e-78
Identity = 132/256 (51.56%), Postives = 184/256 (71.88%), Query Frame = 1
Query:    4 ENRHLVESLCSQAALALEHLRMADEVQRNQVLEATEKLQTALLNSVSHDLHTPLASLSGSLDMLADPDVELGADTRKSLLELAREQSGRLRRLVNNLLDMTRVEAGGLRLNIQPTEPADLIGAALEHCREVLEGATLKLEVADDLPTVPVDFVLMVQVLSNLIENAVKYSGENSQLEI-AVSVDEHFVIKVRDRGVGIPAVDLERIFERFYRVQAPDKVRGSGLGLSISKGIVECHGGTIRAANRSGGGTEVTIDM 768
            E   L+E+  SQAALA+EH+++A++ ++ Q+L+ATEK+Q ALLNS+SHDL TPL S++G+L  L + D  L  +TR+ L+E ARE++ RL RLV NLL MTR+EAG +R+ ++P +  DLIG+A+    + L    +++ +  DLP V +DFVL+V  L NL++NA KYS E S +EI A  + +   I + DRGVGIP  DL  IF++FYRV+ P++V G+GLGL+ISKGIVE HGG I AANR GGGT  TI +
Sbjct:  172 EQLRLLEAFSSQAALAIEHVQLAEQSRQIQLLQATEKMQDALLNSISHDLRTPLVSITGALSTLDEQDASLDDETRQDLVETAREEADRLNRLVGNLLQMTRLEAGAIRVVLEPADIEDLIGSAIGQVEDRLVERDIQITIPPDLPMVSLDFVLIVHALGNLLDNASKYSPEGSLIEIEARQLGQEIQISILDRGVGIPPDDLTHIFDKFYRVRHPEQVTGTGLGLAISKGIVEAHGGRIWAANRPGGGTVFTIAL 427          
BLAST of mRNA_P-wetherbeei_contig17651.1.1 vs. uniprot
Match: A0A7C4PN28_9CHLR (Sensor histidine kinase KdpD n=1 Tax=Anaerolinea thermolimosa TaxID=229919 RepID=A0A7C4PN28_9CHLR)

HSP 1 Score: 246 bits (628), Expect = 2.730e-77
Identity = 135/263 (51.33%), Postives = 180/263 (68.44%), Query Frame = 1
Query:    1 PENRHLVESLCSQAALALEHLRMADEVQRNQVLEATEKLQTALLNSVSHDLHTPLASLSGSLDMLADPDV---ELGADTRKSLLELAREQSGRLRRLVNNLLDMTRVEAGGLRLNIQPTEPADLIGAALEHCREVLEGATLKLEVADDLPTVPVDFVLMVQVLSNLIENAVKYSGENSQLEIAVSVDEHFV-IKVRDRGVGIPAVDLERIFERFYRVQAPDKVRGSGLGLSISKGIVECHGGTIRAANRSGGGTEVTIDMPRG 777
            P+ R L+      AALA+E  R+ ++ Q+  +L+ TEKLQ ALLNS+SHDL TPL+++SG++  L + +    EL    R  LLE A E++ RL RLV NLLDMTR+EAG +R++ +P +  DLIGAAL      L G  +   + D+LP V +DFVLMVQVL NL++NA KYS E+S+++I   + E  + I V DRGVGIP  DL+RIF++FYRVQ PD V G+GLGLSI +GIVE HGG I A NR GGG  +T+ +P G
Sbjct:   64 PDQRDLLAGFGHLAALAIERARLNEQAQQAAILQTTEKLQAALLNSISHDLRTPLSTVSGAISSLLEAEQSGEELDDSIRLDLLENADEEADRLNRLVGNLLDMTRLEAGAMRVHKRPCDVRDLIGAALSQAPRRLAGREVHTHIPDNLPDVALDFVLMVQVLYNLLDNAAKYSPESSEIDITAGIHEDELWISVADRGVGIPPDDLQRIFDKFYRVQRPDGVPGTGLGLSICRGIVEVHGGRIWAENRVGGGAVITLAIPVG 326          
BLAST of mRNA_P-wetherbeei_contig17651.1.1 vs. uniprot
Match: A0A7C3TZ39_9CHLR (Sensor histidine kinase KdpD n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C3TZ39_9CHLR)

HSP 1 Score: 245 bits (625), Expect = 5.050e-77
Identity = 129/257 (50.19%), Postives = 183/257 (71.21%), Query Frame = 1
Query:    4 ENRHLVESLCSQAALALEHLRMADEVQRNQVLEATEKLQTALLNSVSHDLHTPLASLSGSLDMLADPDVELGADTRKSLLELAREQSGRLRRLVNNLLDMTRVEAGGLRLNIQPTEPADLIGAALEHCREVLEGATLKLEVADDLPTVPVDFVLMVQVLSNLIENAVKYSGENSQLEIAVSVDEHFV-IKVRDRGVGIPAVDLERIFERFYRVQAPDKVRGSGLGLSISKGIVECHGGTIRAANRSGGGTEVTIDMP 771
            + R+L++   SQAA+A+E  ++A++ ++  +LEAT K+QTALLNS+SHDL TPLAS++GSL  L D +V L   TR  L+E AR+Q+ RL  LV NLLDMTR+EAG ++   +P +  DLIGAAL    + ++   + +++ DDLP V +DFVLM QVL NL++NA+KYS   + ++I+  + +  V I V DRG+GIP  DL  +F+RFYRV+   +V GSGLGLS+SKGIVE HGG +  A+R GGGT  +I++P
Sbjct:   54 DQRYLLDVFASQAAMAIERAQLAEDARQAYILEATRKMQTALLNSISHDLRTPLASITGSLTSLLDNEVRLDEGTRHDLIETARQQAERLNHLVGNLLDMTRLEAGAMQPVREPCDIQDLIGAALAQLGDRVKERQIAVDLPDDLPMVAMDFVLMTQVLVNLLDNALKYSAPQTIVDISAHLTDTSVQIDVADRGIGIPDDDLPHVFDRFYRVRHAGRVDGSGLGLSLSKGIVELHGGRLTGAHRPGGGTIFSIELP 310          
BLAST of mRNA_P-wetherbeei_contig17651.1.1 vs. uniprot
Match: A0A7X7QAN2_9CHLR (Histidine kinase n=1 Tax=Anaerolineales bacterium TaxID=2073117 RepID=A0A7X7QAN2_9CHLR)

HSP 1 Score: 246 bits (629), Expect = 1.840e-75
Identity = 129/255 (50.59%), Postives = 186/255 (72.94%), Query Frame = 1
Query:   16 LVESLCSQAALALEHLRMADEVQRNQVLEATEKLQTALLNSVSHDLHTPLASLSGSLDMLADPDVELGADTRKSLLELAREQSGRLRRLVNNLLDMTRVEAGGLRLNIQPTEPADLIGAALEHCREVLEGATLKLEVADDLPTVPVDFVLMVQVLSNLIENAVKYSGENSQLEIAVSVDEHFVIKVR--DRGVGIPAVDLERIFERFYRVQAPDKVRGSGLGLSISKGIVECHGGTIRAANRSGGGTEVTIDMPR 774
            +V +  SQAALA+E  ++A   ++ ++L+AT++LQTALLNS+SHDL TPL +++G+L  L + D  L +D R+++   A E++ RL  LV NLL ++R+EAG LRL+ QP + AD +G+AL+   + LEG  + L   DDLP +P DFVL+VQVL+NLI+NA+KYS  +S +E+ + VD   V++V   DRG+G+P  DL  IF++F+RVQ PD V G+GLGLSI++GIVE HGG IRA NR+GGGT V+  +P+
Sbjct:  240 MVTAFASQAALAIERAQLAGAARQVELLQATDRLQTALLNSISHDLRTPLVTITGTLSALDEDDPLLESDVRRAMARAACEEAERLNHLVENLLSISRIEAGALRLSWQPGDLADAVGSALDRLSDRLEGHPIVLIEPDDLPLLPFDFVLIVQVLTNLIDNALKYSAPDSPIEVRL-VDAGAVMRVEVADRGMGVPVEDLGHIFDKFFRVQRPDSVAGTGLGLSIARGIVEAHGGCIRAENRTGGGTLVSFTLPK 493          
BLAST of mRNA_P-wetherbeei_contig17651.1.1 vs. uniprot
Match: A0A3N5VLK7_9CHLR (Histidine kinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3N5VLK7_9CHLR)

HSP 1 Score: 254 bits (650), Expect = 2.590e-75
Identity = 130/258 (50.39%), Postives = 185/258 (71.71%), Query Frame = 1
Query:    1 PENRHLVESLCSQAALALEHLRMADEVQRNQVLEATEKLQTALLNSVSHDLHTPLASLSGSLDMLADPDVELGADTRKSLLELAREQSGRLRRLVNNLLDMTRVEAGGLRLNIQPTEPADLIGAALEHCREVLEGATLKLEVADDLPTVPVDFVLMVQVLSNLIENAVKYSGENSQLEIAVS-VDEHFVIKVRDRGVGIPAVDLERIFERFYRVQAPDKVRGSGLGLSISKGIVECHGGTIRAANRSGGGTEVTIDMP 771
            PE R ++ +  +QAALA+E  R+ ++ QR  +L+ATEKLQTALLNS+SHDL TPL S++G+L  L +    L  + R+SL+  ARE++ RL RLV NLL MTR+E+G ++L+ +P +  D+IG ALE   +      +K+ V D+ P VP+DF L+VQV+ NL+ENAVKYS  +S +E++ S VD+   +++ DRGVGIP  DL  +F++FYRVQ  + V G+GLGLSISKGI+E H GTI A  R+GGGT V++++P
Sbjct:  623 PEQRQILAAFANQAALAVERARLVEQAQRADLLQATEKLQTALLNSISHDLRTPLVSITGALTSLDEQSDSLDDENRESLILTAREEADRLNRLVGNLLSMTRIESGAIKLHREPGDIQDVIGTALEQLGKRAANHEIKVNVPDNFPLVPMDFTLIVQVVVNLLENAVKYSSRSSLIEVSASPVDDKARLEIADRGVGIPPEDLTHVFDKFYRVQRSESVSGTGLGLSISKGIIEAHHGTIYARARAGGGTVVSVELP 880          
BLAST of mRNA_P-wetherbeei_contig17651.1.1 vs. uniprot
Match: A0A7C1EVM7_9CHLR (Histidine kinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C1EVM7_9CHLR)

HSP 1 Score: 253 bits (647), Expect = 9.350e-75
Identity = 136/258 (52.71%), Postives = 178/258 (68.99%), Query Frame = 1
Query:    1 PENRHLVESLCSQAALALEHLRMADEVQRNQVLEATEKLQTALLNSVSHDLHTPLASLSGSLDMLADPDVELGADTRKSLLELAREQSGRLRRLVNNLLDMTRVEAGGLRLNIQPTEPADLIGAALEHCREVLEGATLKLEVADDLPTVPVDFVLMVQVLSNLIENAVKYSGENSQLEIAVSVDE-HFVIKVRDRGVGIPAVDLERIFERFYRVQAPDKVRGSGLGLSISKGIVECHGGTIRAANRSGGGTEVTIDMP 771
            PE R L+ES  SQAALA+E  +++D  Q+ QVL+ATEKLQTALLN+VSHDL TPL S++G+L  L D  V+L    R++L+E A +++ RL RLV NLLDMTR+E+G  RL  +P +  D+IGAAL+   + L    ++ ++ D+LP V +DFV M QVL NLI+NA+KY+  N  +EI   + E    I V D G G+P  DL ++F++FYR Q PD V GSGLGLSI KGIVE HGGTIRA NR  GG    I +P
Sbjct:  650 PEQRRLMESFASQAALAIERAQLSDAAQQAQVLKATEKLQTALLNAVSHDLRTPLVSITGALSTLQDDQVQLDERARRTLVENASDEAARLNRLVGNLLDMTRLESGAYRLKREPCDVQDMIGAALDQLSDRLAERLVQTQIDDNLPLVALDFVPMTQVLVNLIDNALKYAPPNRPIEIHARLAETRLQISVADYGPGLPPQDLAKVFDKFYRAQWPDNVSGSGLGLSICKGIVEAHGGTIRAENRLSGGAVFEITLP 907          
BLAST of mRNA_P-wetherbeei_contig17651.1.1 vs. uniprot
Match: A0A1F8NN96_9CHLR (Histidine kinase n=1 Tax=Chloroflexi bacterium RBG_13_68_17 TaxID=1797638 RepID=A0A1F8NN96_9CHLR)

HSP 1 Score: 252 bits (643), Expect = 3.940e-74
Identity = 135/259 (52.12%), Postives = 183/259 (70.66%), Query Frame = 1
Query:    1 PENRHLVESLCSQAALALEHLRMADEVQRNQVLEATEKLQTALLNSVSHDLHTPLASLSGSLDMLADPDVELGADT-RKSLLELAREQSGRLRRLVNNLLDMTRVEAGGLRLNIQPTEPADLIGAALEHCREVLEGATLKLEVADDLPTVPVDFVLMVQVLSNLIENAVKYSGENSQLEIAVSVDEHFV-IKVRDRGVGIPAVDLERIFERFYRVQAPDKVRGSGLGLSISKGIVECHGGTIRAANRSGGGTEVTIDMP 771
            PE R  +E + SQA+LA+E  R+ +  ++ +VL+ATEKLQTALL+S+SHDL TPL S++G+L  L + D  L ADT R +L++ A  ++ RL RLV NLLDMTR+EAG LRL+ +P +  D+IGAAL    E L    L L+V +DLP VP+DFV +VQVL NL++NA KYS  ++ +++       F+ I+V DRG+GIP  DL RIF++FYRVQ P+ + G+GLGLSI +GIVE HGG I A NR GGGT +   +P
Sbjct:  656 PEERRTMEVIASQASLAIERARLGEAARQAEVLQATEKLQTALLSSISHDLRTPLVSITGALSSLCE-DASLLADTNRANLIDNAHAEAVRLNRLVGNLLDMTRLEAGALRLSREPCDVQDMIGAALTQMEEALRDRRLTLDVPEDLPLVPMDFVTIVQVLVNLLDNAQKYSSPDTPIDVRARAAGAFLEIEVSDRGLGIPKEDLRRIFDKFYRVQRPESIGGTGLGLSICRGIVEAHGGFIAAENRPGGGTTIAFALP 913          
BLAST of mRNA_P-wetherbeei_contig17651.1.1 vs. uniprot
Match: A0A847FIP1_9CHLR (Histidine kinase n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A847FIP1_9CHLR)

HSP 1 Score: 243 bits (621), Expect = 4.270e-74
Identity = 134/259 (51.74%), Postives = 176/259 (67.95%), Query Frame = 1
Query:    4 ENRHLVESLCSQAALALEHLRMADEVQRNQVLEATEKLQTALLNSVSHDLHTPLASLSGSLDMLADPDVELGADTRKSLLELAREQSGRLRRLVNNLLDMTRVEAGGLRLNIQPTEPADLIGAALEHCREVLEGATLKLEVADDLPTVPVDFVLMVQVLSNLIENAVKYSGENSQLEIAVSVDEHFV-IKVRDRGVGIPAVDLERIFERFYRVQAPDKVRGSGLGLSISKGIVECHGGTIRAANRSGGGTEVTIDMPRG 777
            E R  +++  SQAALA+E   +A+     +VL+ATE+LQTALLNS+SHDL TPL S+ G+L  L +    L  D R+SL++ ARE++ RL RLV NLLDMTR+EAG LRL ++P +  DL+GAA+EH RE L    + + V  DLP VP+DFVLM QVL N+++NA KYS  +  +E+   VD +   I V D    IPA DL R+F++FYRVQ P +V G+GLGLSI KGIVE HGG I A +R  GG  + I +P G
Sbjct:  252 EQRQFLDTFASQAALAIERAHLAELAADAEVLQATERLQTALLNSISHDLRTPLVSIVGALSSLQEDGEGLDLDYRRSLVDNAREEAERLNRLVGNLLDMTRIEAGALRLVLEPCDVQDLVGAAMEHLREGLTSRPVLVNVPSDLPMVPMDFVLMEQVLVNILDNAHKYSPPDLPIELRAWVDGNEARIDVADNAPQIPAGDLNRVFDKFYRVQVPRQVSGTGLGLSICKGIVEAHGGRIWAEHRPEGGNVLRIALPLG 510          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17651.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1F8QCN8_9CHLR7.100e-7950.97Histidine kinase n=1 Tax=Chloroflexi bacterium RBG... [more]
A0A3N5HQD0_9BACT3.300e-7850.39Histidine kinase (Fragment) n=1 Tax=bacterium TaxI... [more]
A0A1F8PU41_9CHLR3.640e-7851.56Histidine kinase n=1 Tax=Chloroflexi bacterium RBG... [more]
A0A7C4PN28_9CHLR2.730e-7751.33Sensor histidine kinase KdpD n=1 Tax=Anaerolinea t... [more]
A0A7C3TZ39_9CHLR5.050e-7750.19Sensor histidine kinase KdpD n=1 Tax=Anaerolineae ... [more]
A0A7X7QAN2_9CHLR1.840e-7550.59Histidine kinase n=1 Tax=Anaerolineales bacterium ... [more]
A0A3N5VLK7_9CHLR2.590e-7550.39Histidine kinase n=1 Tax=Chloroflexi bacterium Tax... [more]
A0A7C1EVM7_9CHLR9.350e-7552.71Histidine kinase n=1 Tax=Chloroflexi bacterium Tax... [more]
A0A1F8NN96_9CHLR3.940e-7452.12Histidine kinase n=1 Tax=Chloroflexi bacterium RBG... [more]
A0A847FIP1_9CHLR4.270e-7451.74Histidine kinase n=1 Tax=Anaerolineaceae bacterium... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17651contigP-wetherbeei_contig17651:432..1211 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog926569.ANT_09250
PFAMsDUF4118,GAF,HATPase_c,HisKA
Model size780
Max annot lvl200795|Chloroflexi
KEGG koko:K07646
KEGG Pathwayko02020,map02020
KEGG ModuleM00454
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.45e-71
EggNOG OGsCOG0642@1|root,COG2205@2|Bacteria,2G6KS@200795|Chloroflexi
EC2.7.13.3
Descriptionhistidine kinase A domain protein
Cds size780
COG categoryT
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko02022
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186122.3239956-CDS-P-wetherbeei_contig17651:431..12111683186122.3239956-CDS-P-wetherbeei_contig17651:431..1211Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17651 432..1211 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17651.1.1prot_P-wetherbeei_contig17651.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17651 432..1211 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17651.1.1

>prot_P-wetherbeei_contig17651.1.1 ID=prot_P-wetherbeei_contig17651.1.1|Name=mRNA_P-wetherbeei_contig17651.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=260bp
PENRHLVESLCSQAALALEHLRMADEVQRNQVLEATEKLQTALLNSVSHD
LHTPLASLSGSLDMLADPDVELGADTRKSLLELAREQSGRLRRLVNNLLD
MTRVEAGGLRLNIQPTEPADLIGAALEHCREVLEGATLKLEVADDLPTVP
VDFVLMVQVLSNLIENAVKYSGENSQLEIAVSVDEHFVIKVRDRGVGIPA
VDLERIFERFYRVQAPDKVRGSGLGLSISKGIVECHGGTIRAANRSGGGT
EVTIDMPRG*
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mRNA from alignment at P-wetherbeei_contig17651:432..1211-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17651.1.1 ID=mRNA_P-wetherbeei_contig17651.1.1|Name=mRNA_P-wetherbeei_contig17651.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=780bp|location=Sequence derived from alignment at P-wetherbeei_contig17651:432..1211- (Phaeothamnion wetherbeei SAG_119_79)
CCGGAGAACCGGCACCTGGTTGAATCTCTTTGTTCCCAAGCGGCGCTGGC TCTCGAACACTTGCGGATGGCGGACGAGGTGCAGAGAAATCAGGTCTTGG AGGCCACCGAGAAGCTCCAGACCGCGCTCTTGAACTCCGTGTCCCATGAC CTGCACACTCCGCTGGCTTCGCTGTCGGGGTCGCTGGATATGCTCGCTGA CCCCGACGTCGAGCTCGGGGCCGATACGCGCAAGAGTCTGCTCGAGTTGG CGAGGGAGCAAAGTGGACGATTACGCCGTTTGGTCAACAATCTGCTCGAT ATGACGCGCGTGGAAGCCGGCGGTTTGCGCCTCAATATCCAGCCTACCGA GCCTGCCGATCTGATCGGGGCCGCCTTGGAGCATTGCCGTGAAGTTCTGG AAGGGGCTACGCTCAAACTCGAAGTGGCCGACGATCTCCCTACGGTTCCG GTGGATTTCGTGCTGATGGTGCAAGTGCTCTCCAATCTCATAGAGAATGC GGTCAAGTATTCCGGCGAGAACAGCCAGCTTGAGATTGCGGTTTCGGTCG ACGAGCATTTCGTGATCAAGGTCCGAGATCGAGGCGTGGGGATTCCCGCG GTCGATCTCGAGCGGATTTTCGAACGGTTTTACCGCGTCCAGGCGCCCGA CAAGGTGCGGGGCAGCGGTCTGGGCCTGTCGATCAGCAAGGGCATCGTAG AGTGCCACGGGGGCACCATCCGAGCGGCCAACCGCAGCGGTGGAGGAACC GAAGTGACGATAGATATGCCGCGGGGCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17651:432..1211-

>mRNA_P-wetherbeei_contig17651.1.1 ID=mRNA_P-wetherbeei_contig17651.1.1|Name=mRNA_P-wetherbeei_contig17651.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=780bp|location=Sequence derived from alignment at P-wetherbeei_contig17651:432..1211- (Phaeothamnion wetherbeei SAG_119_79)
CCGGAGAACCGGCACCTGGTTGAATCTCTTTGTTCCCAAGCGGCGCTGGC
TCTCGAACACTTGCGGATGGCGGACGAGGTGCAGAGAAATCAGGTCTTGG
AGGCCACCGAGAAGCTCCAGACCGCGCTCTTGAACTCCGTGTCCCATGAC
CTGCACACTCCGCTGGCTTCGCTGTCGGGGTCGCTGGATATGCTCGCTGA
CCCCGACGTCGAGCTCGGGGCCGATACGCGCAAGAGTCTGCTCGAGTTGG
CGAGGGAGCAAAGTGGACGATTACGCCGTTTGGTCAACAATCTGCTCGAT
ATGACGCGCGTGGAAGCCGGCGGTTTGCGCCTCAATATCCAGCCTACCGA
GCCTGCCGATCTGATCGGGGCCGCCTTGGAGCATTGCCGTGAAGTTCTGG
AAGGGGCTACGCTCAAACTCGAAGTGGCCGACGATCTCCCTACGGTTCCG
GTGGATTTCGTGCTGATGGTGCAAGTGCTCTCCAATCTCATAGAGAATGC
GGTCAAGTATTCCGGCGAGAACAGCCAGCTTGAGATTGCGGTTTCGGTCG
ACGAGCATTTCGTGATCAAGGTCCGAGATCGAGGCGTGGGGATTCCCGCG
GTCGATCTCGAGCGGATTTTCGAACGGTTTTACCGCGTCCAGGCGCCCGA
CAAGGTGCGGGGCAGCGGTCTGGGCCTGTCGATCAGCAAGGGCATCGTAG
AGTGCCACGGGGGCACCATCCGAGCGGCCAACCGCAGCGGTGGAGGAACC
GAAGTGACGATAGATATGCCGCGGGGCTGA
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