mRNA_P-wetherbeei_contig17605.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17605.2.1
Unique NamemRNA_P-wetherbeei_contig17605.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17605.2.1 vs. uniprot
Match: UPI001993F317 (Septal ring lytic transglycosylase RlpA family protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=UPI001993F317)

HSP 1 Score: 328 bits (842), Expect = 1.400e-107
Identity = 178/271 (65.68%), Postives = 206/271 (76.01%), Query Frame = 3
Query:  477 LSLVLALGACSSARVREDPAPAVSAPAGKPAASPGAARPGAFYKDDGPGVNPPDFDKIADAQPRREPLHRFANNPYQVFGKDYVPIRTAGAYRERGIGSWYGRRYHGQKTSNGEIYDMYAMTAAHPTLPIPSYARVTSVANGRSVVVRINDRGPFHSGRVIDLSYVAAYKLGYAQGGSTLVEVESLLPEGGQVAAAAP--ARPXXXXXXQAA-------PLPVSSTASGVFLQLGAFSVRDNAEVFRAKVYKELAWLNDPIEVSAQGALFR 1262
            L++ +AL  CSS   R  P P   A +G+PAA P     G +YKDDGPG N PD D + DA PR E  HRFANNPYQVFGKDYVP+R +G +R+RG+ SWYGRRYHGQKTS+GEIYDM+AMTAAHPTLPIPSYARVTSV+NG+SVVVRINDRGPF S RVIDLSYVAAYKLGY Q GSTLV+VE + P+    A AAP  A P       +        PLPVS+ ASGV+LQLGAFS+RDNAE FRA+VYK+LAWLND ++V+AQG LFR
Sbjct:   10 LAIAIALAGCSSGPKRSVPEPGSQA-SGRPAAKPPGG--GGYYKDDGPGDNAPDLDNVTDAVPRVERPHRFANNPYQVFGKDYVPVRVSGDFRQRGVASWYGRRYHGQKTSSGEIYDMHAMTAAHPTLPIPSYARVTSVSNGKSVVVRINDRGPFLSDRVIDLSYVAAYKLGYIQAGSTLVDVEVVTPDTPLRATAAPPVASPAVAMAPLSPATPSISPPLPVSADASGVYLQLGAFSMRDNAESFRARVYKDLAWLNDSMQVNAQGGLFR 277          
BLAST of mRNA_P-wetherbeei_contig17605.2.1 vs. uniprot
Match: A0A1F3Y8T6_9PROT (Endolytic peptidoglycan transglycosylase RlpA n=1 Tax=Betaproteobacteria bacterium RBG_16_66_20 TaxID=1797479 RepID=A0A1F3Y8T6_9PROT)

HSP 1 Score: 325 bits (834), Expect = 2.970e-106
Identity = 176/300 (58.67%), Postives = 215/300 (71.67%), Query Frame = 3
Query:  471 VALSLVLALGACSSARVREDPAPAVSAPAGKP--AASPGAARPGAFYKDDGPGVNPP-DFDKIADAQPRREPLHRFANNPYQVFGKDYVPIRTAGAYRERGIGSWYGRRYHGQKTSNGEIYDMYAMTAAHPTLPIPSYARVTSVANGRSVVVRINDRGPFHSGRVIDLSYVAAYKLGYAQGGSTLVEVESLLPEGGQVAAAAPARPXXXXXXQAAPLPVSST-ASGVFLQLGAFSVRDNAEVFRAKVYKELAWLNDPIEVSAQGALFRLQLGPYKSQDEARRMAERIQAELNLKPVLLVK 1358
            V +   LA+  C +    E P  AV  P+ +   AA P A+  GA+YKDDGPG NPP +   I DA P+ EPLHRFAN PYQVFG+DY P+  A  +++ GIGSWYGRR+HG  TS+GE YDMYAMTAAHPTLPIPSY RVT++ANGRSVVVRINDRGPFHS R+IDLSY AA+KLGY + GS  VEVESLLP                   + AP+  + T  +GVFLQLG FS R+ AE FR +VY+ELAWL++ I+V A GALFRL LGPY+SQDEAR +A+RIQ+E NL+P+L+V+
Sbjct:    4 VVIVAFLAVSGCGTISRNEAPPAAVERPSPEKSAAAPPAASGKGAYYKDDGPGANPPPNLGAIPDAVPKPEPLHRFANRPYQVFGRDYAPVAGAAPFKQIGIGSWYGRRFHGAPTSSGEPYDMYAMTAAHPTLPIPSYVRVTNIANGRSVVVRINDRGPFHSDRIIDLSYTAAWKLGYVEVGSARVEVESLLP------------------GKTAPVQEAKTETNGVFLQLGVFSAREAAENFRVRVYRELAWLSETIQVIAGGALFRLHLGPYRSQDEARTIADRIQSEFNLRPLLVVR 285          
BLAST of mRNA_P-wetherbeei_contig17605.2.1 vs. uniprot
Match: A0A1F3ZCX1_9PROT (Endolytic peptidoglycan transglycosylase RlpA n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17 TaxID=1797484 RepID=A0A1F3ZCX1_9PROT)

HSP 1 Score: 327 bits (838), Expect = 6.970e-106
Identity = 185/339 (54.57%), Postives = 229/339 (67.55%), Query Frame = 3
Query:  429 GLRERPVSGMLRAAVALSLVLALGACSSARV-----REDPAPAV---SAPAGKPAASPGAARPGAFYKDDGPG-VNPPDFDKIADAQPRREPLHRFANNPYQVFGKDYVPIRTAGAYRERGIGSWYGRRYHGQKTSNGEIYDMYAMTAAHPTLPIPSYARVTSVANGRSVVVRINDRGPFHSGRVIDLSYVAAYKLGYAQGGSTLVEVESLLPEGGQVAAAAPAR--------PXXXXXXQAAP------------LPVSSTASGVFLQLGAFSVRDNAEVFRAKVYKELAWLNDPIEVSAQGALFRLQLGPYKSQDEARRMAERIQAELNLKPVLLVK 1358
            G+  R   G L     L+ VLAL AC SA V     REDP  A     AP   PAA+  A+R GA+YKDDGPG   PPD DKIADAQPR EPLHRFANNPY VFG+DYVP+++   +R+ GIGSWYGR++HGQ+T++GEIYDMY MTAAHPTLPIPSY RV +  NGRSV+VR+NDRGPFH+GRVIDLS+ AA++LGY   GS  ++VE L  E   +A  AP R        P       AAP               +  ASGV+LQLGAFS RDNAE FRA+VY+E+AWLND IEV  +  ++RL LGPYK + EA  +AER++ +++L PV +++
Sbjct:   18 GIAHRAACGALVPVWVLAAVLALTACGSAPVAPVIEREDPGRAAVRTPAPGAAPAAA--ASRGGAYYKDDGPGDAPPPDLDKIADAQPRMEPLHRFANNPYNVFGRDYVPLKSLAPFRQSGIGSWYGRKFHGQRTASGEIYDMYGMTAAHPTLPIPSYVRVLNQQNGRSVIVRVNDRGPFHAGRVIDLSFAAAFRLGYVIAGSAPLQVELLQAE--DIAKLAPQRGAVPVTVLPAEPGAGAAAPGGDREPSKPAVLSAAAPAASGVYLQLGAFSARDNAESFRARVYREVAWLNDAIEVLQREGIYRLHLGPYKDRGEATGVAERLKRDIDLNPVFVIR 352          
BLAST of mRNA_P-wetherbeei_contig17605.2.1 vs. uniprot
Match: A0A1F4B8V7_9PROT (Endolytic peptidoglycan transglycosylase RlpA n=4 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4B8V7_9PROT)

HSP 1 Score: 321 bits (822), Expect = 1.120e-104
Identity = 170/297 (57.24%), Postives = 210/297 (70.71%), Query Frame = 3
Query:  471 VALSLVLALGACSSARVREDPAPAVSAPAGKPAASPGAARPGAFYKDDGPG-VNPPDFDKIADAQPRREPLHRFANNPYQVFGKDYVPIRTAGAYRERGIGSWYGRRYHGQKTSNGEIYDMYAMTAAHPTLPIPSYARVTSVANGRSVVVRINDRGPFHSGRVIDLSYVAAYKLGYAQGGSTLVEVESLLPEGGQVAAAAPARPXXXXXXQAAPLPVSSTASGVFLQLGAFSVRDNAEVFRAKVYKELAWLNDPIEVSAQGALFRLQLGPYKSQDEARRMAERIQAELNLKPVLLVK 1358
            +AL+L L L  C     RE               +P A   G +YKDDGPG   PP+ D + DA PR EPLHRFAN PYQVFG+DYVP+   G +R+RG  SWYGRR++G KTS+GE YDMYAMTAAHPTLPIPSYARVT+VA GRSVVVR+NDRGPFH+ R IDLSY AAYKLGYA+ GS LV++++++P     AAAAPA P                  GV+LQLGAF+ R++AE FRA+V +ELAWL+D I V A GAL+RL LGPY+S DEAR +A+RI+AELN+ P+++V+
Sbjct:    4 LALALALTLSGCGMFAKRE---------------APRATPQGGYYKDDGPGDAPPPNLDAVPDAVPRDEPLHRFANRPYQVFGRDYVPLAAVGPFRQRGRASWYGRRFNGGKTSSGEPYDMYAMTAAHPTLPIPSYARVTNVATGRSVVVRVNDRGPFHADRAIDLSYTAAYKLGYAEAGSALVDIQAIVPGASVAAAAAPAPP----------------GKGVYLQLGAFAARESAESFRARVLRELAWLSDAIHVVAGGALYRLHLGPYRSSDEARPVADRIRAELNVAPLVVVR 269          
BLAST of mRNA_P-wetherbeei_contig17605.2.1 vs. uniprot
Match: A0A1F4EX76_9PROT (Endolytic peptidoglycan transglycosylase RlpA n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_67_28 TaxID=1797503 RepID=A0A1F4EX76_9PROT)

HSP 1 Score: 317 bits (813), Expect = 2.730e-103
Identity = 170/297 (57.24%), Postives = 211/297 (71.04%), Query Frame = 3
Query:  471 VALSLVLALGACSSARVREDPAPAVSAPAGKPAASPGAARPGAFYKDDGPGVNPP-DFDKIADAQPRREPLHRFANNPYQVFGKDYVPIRTAGAYRERGIGSWYGRRYHGQKTSNGEIYDMYAMTAAHPTLPIPSYARVTSVANGRSVVVRINDRGPFHSGRVIDLSYVAAYKLGYAQGGSTLVEVESLLPEGGQVAAAAPARPXXXXXXQAAPLPVSSTASGVFLQLGAFSVRDNAEVFRAKVYKELAWLNDPIEVSAQGALFRLQLGPYKSQDEARRMAERIQAELNLKPVLLVK 1358
            +A+ L  +L  C     RE  APA              A  G +YKDDGPG  PP D   + DA PR EPLHRFAN PYQVFG+DY+P+     +R+RG  SWYGRR+HG KTS+GE+YDMYAM+AAHPTLPIPSYARVT VA+GRSVVVRINDRGPFHS R IDLSY AA+KLG+A+ GS LV++ES+LP    +AAA+P                ++ A GV+LQLGAFSVR++AE FR ++ +ELAWL+D I V A GALFR+ LGPY+SQD+AR +AERI+AELN+ P+ +V+
Sbjct:    4 LAVVLAFSLSGCGLLAKREPAAPA--------------APKGGYYKDDGPGDTPPRDLHTVPDAVPRDEPLHRFANRPYQVFGRDYLPLAAPAPFRQRGTASWYGRRFHGGKTSSGELYDMYAMSAAHPTLPIPSYARVTHVASGRSVVVRINDRGPFHSERAIDLSYAAAFKLGFAELGSALVDIESVLPREPALAAASPP---------------AAEAGGVYLQLGAFSVRESAENFRVRMVRELAWLSDAIHVVAGGALFRVHLGPYRSQDQARPVAERIRAELNMVPLFVVR 271          
BLAST of mRNA_P-wetherbeei_contig17605.2.1 vs. uniprot
Match: A0A1F4AWB2_9PROT (Endolytic peptidoglycan transglycosylase RlpA n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_66_14 TaxID=1797490 RepID=A0A1F4AWB2_9PROT)

HSP 1 Score: 314 bits (805), Expect = 4.260e-102
Identity = 168/297 (56.57%), Postives = 209/297 (70.37%), Query Frame = 3
Query:  471 VALSLVLALGACSSARVREDPAPAVSAPAGKPAASPGAARPGAFYKDDGPGVNPP-DFDKIADAQPRREPLHRFANNPYQVFGKDYVPIRTAGAYRERGIGSWYGRRYHGQKTSNGEIYDMYAMTAAHPTLPIPSYARVTSVANGRSVVVRINDRGPFHSGRVIDLSYVAAYKLGYAQGGSTLVEVESLLPEGGQVAAAAPARPXXXXXXQAAPLPVSSTASGVFLQLGAFSVRDNAEVFRAKVYKELAWLNDPIEVSAQGALFRLQLGPYKSQDEARRMAERIQAELNLKPVLLVK 1358
            +A++L LAL  C     R              AA P     G +YKDDGPG +PP +   + DA+PR EPLHRFAN PYQVFG+DYVP    G YRERGI SWYGRR+HG +TS+GE+YDMYAMTAAHPTLPIPSYARV+ V + RSVVVRINDRGPFHSGR IDLSY AAY+LG    GS LV++E+++P  G VAAA PA                + A GV+LQLGAFS R++AE FRA++ +EL WL + I+V A GAL+RL LGP++SQDEAR +AERI++EL++ P+ +V+
Sbjct:    4 LAVALALALAGCGMFAKR--------------AAEPQPPAKGGYYKDDGPGESPPANLHALPDAEPRAEPLHRFANRPYQVFGRDYVPRTAIGPYRERGIASWYGRRFHGGQTSSGELYDMYAMTAAHPTLPIPSYARVSRVGDRRSVVVRINDRGPFHSGRAIDLSYAAAYRLGVVGDGSALVDIEAVVPGAGPVAAATPA----------------AEAKGVYLQLGAFSARESAENFRARLQRELTWLTETIQVIAAGALYRLHLGPFRSQDEARPVAERIRSELDVSPLFVVR 270          
BLAST of mRNA_P-wetherbeei_contig17605.2.1 vs. uniprot
Match: A0A1F4B659_9PROT (Endolytic peptidoglycan transglycosylase RlpA n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_65_24 TaxID=1797489 RepID=A0A1F4B659_9PROT)

HSP 1 Score: 315 bits (807), Expect = 2.280e-101
Identity = 182/340 (53.53%), Postives = 223/340 (65.59%), Query Frame = 3
Query:  459 LRAAVALSLVLALGACSSARVREDPAPAVSAPAGKPAASPGAARP--GAFYKDDGPGVNPP-DFDKIADAQPRREPLHRFANNPYQVFGKDYVPIRTAGAYRERGIGSWYGRRYHGQKTSNGEIYDMYAMTAAHPTLPIPSYARVTSVANGRSVVVRINDRGPFHSGRVIDLSYVAAYKLGYAQGGSTLVEVESLL-----------------------PEGGQV--------------AAAAPARPXXXXXXQAAPLPVSSTASGVFLQLGAFSVRDNAEVFRAKVYKELAWLNDPIEVSAQGALFRLQLGPYKSQDEARRMAERIQAELNLKPVLLVK 1358
            LR A+AL+  L L AC SA  R        A A KP A+  A R   G +Y+DDGPG NPP + D+I DA+PR EPLHRFANNPY VFG  YVP RT   YR+ GIGSWYGR++HGQ+TS GE YDMYAM+AAH TLPIPSYARVT++ANGRSV+VRINDRGPFHSGR+IDLSY AAYKLGYA  GS  VEVE++                        P   +V               AA+  +P      QA  +PV + A G++LQLGAFS RDNAE FR +VY++LAWLN+ I++  +  +FRL LGPY+S+DEA  MAE+I+  L  KPV++V+
Sbjct:    4 LRFALALAPALILAACGSAPKRAAVERNTGAIAPKPTAAATAPRGSGGGYYQDDGPGDNPPANLDQIEDAEPRLEPLHRFANNPYTVFGLQYVPYRTLAPYRQHGIGSWYGRKFHGQRTSGGEPYDMYAMSAAHATLPIPSYARVTNLANGRSVIVRINDRGPFHSGRLIDLSYAAAYKLGYAGAGSASVEVEAITREDMPLIAARRRQAVPPVTAASAPRANEVQPVAETQALAPVILTAASALQPEPAKPVQA--IPVDAEAGGIYLQLGAFSGRDNAENFRIRVYQQLAWLNEAIQIFPREGMFRLHLGPYRSRDEANGMAEKIREALQFKPVVVVR 341          
BLAST of mRNA_P-wetherbeei_contig17605.2.1 vs. uniprot
Match: A0A1F3YIS5_9PROT (Endolytic peptidoglycan transglycosylase RlpA n=3 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F3YIS5_9PROT)

HSP 1 Score: 311 bits (796), Expect = 5.540e-100
Identity = 169/285 (59.30%), Postives = 205/285 (71.93%), Query Frame = 3
Query:  582 AARPGAFYKDDGPGVNPP-DFDKIADAQPRREPLHRFANNPYQVFGKDYVPIRTAGAYRERGIGSWYGRRYHGQKTSNGEIYDMYAMTAAHPTLPIPSYARVTSVANGRSVVVRINDRGPFHSGRVIDLSYVAAYKLGYAQGGSTLVEVESLLPE-------------GGQV------------AAAAPARPXXXXXXQAAPLPVSSTASGVFLQLGAFSVRDNAEVFRAKVYKELAWLNDPIEVSAQGALFRLQLGPYKSQDEARRMAERIQAELNLKPVLLVK 1358
            A RPGA+YKDDGPG NPP D + IADA+P+ EPLHRFANNPY V G+DYVP+RT  AYRERG GSWYGR++HGQ+TS+GE YDMYAMTAAHP LPIPSYARVT+ +NGRSVVVRINDRGPFH+GRVIDLSY AA+KLGY   GS  VEVE++ P+               QV            AAA  ARP       A  +PV + ASGV+LQLGAFS R NAE FR+++  +LAWL+  IE+  +  LFRL LGPY+ + EA  +AERI++ LNL+ V +++
Sbjct:   40 APRPGAYYKDDGPGDNPPSDLEAIADAEPKLEPLHRFANNPYNVLGQDYVPLRTLQAYRERGRGSWYGRKFHGQRTSSGEPYDMYAMTAAHPVLPIPSYARVTNPSNGRSVVVRINDRGPFHTGRVIDLSYTAAWKLGYVANGSAPVEVEAITPKEIASLAARRAPDAAPQVVVAEADVRALPPAAAPEARPFDSTPATA--IPVDAQASGVYLQLGAFSARANAENFRSRLNAQLAWLDRAIEILQRDGLFRLHLGPYRDRAEAGGIAERIRSALNLEAVFVIR 322          
BLAST of mRNA_P-wetherbeei_contig17605.2.1 vs. uniprot
Match: A0A521XPR2_9PROT (Endolytic peptidoglycan transglycosylase RlpA n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521XPR2_9PROT)

HSP 1 Score: 309 bits (792), Expect = 3.290e-99
Identity = 179/333 (53.75%), Postives = 220/333 (66.07%), Query Frame = 3
Query:  471 VALSLVLALGACSSARVREDPAPAVSAPAGKPAASPGAAR--PGAFYKDDGPGVNPP-DFDKIADAQPRREPLHRFANNPYQVFGKDYVPIRTAGAYRERGIGSWYGRRYHGQKTSNGEIYDMYAMTAAHPTLPIPSYARVTSVANGRSVVVRINDRGPFHSGRVIDLSYVAAYKLGYAQGGSTLVEVESLLPEG------------GQVAAAAP-------------------ARPXXXXXXQAAP---LPVSSTASGVFLQLGAFSVRDNAEVFRAKVYKELAWLNDPIEVSAQGALFRLQLGPYKSQDEARRMAERIQAELNLKPVLLVK 1358
            +AL+  L L AC SA  R          A KPA +  A R       +DDGPG NPP + D+I DA+PR EPLHRFANNPY VFG  YVP RT   YR+RGIGSWYGR++HGQ+TS+GE YDMYAM+AAH TLPIPSYARVT++ANGRSV+VR+NDRGPFHSGR++DLSY AAYKLGYA  GS  VEVE++  E               V AAAP                   A         A P   +PV + ASG++LQLGAFS RDNAE FR +VY++LAWLND I+V ++  +FRL+LGPY+++DEA  MAE+I+  L  KPV++V+
Sbjct:    2 LALAAALILAACGSAPKRTTVERDTGVIAPKPATAATAPRGXXXXXXQDDGPGDNPPANLDQIEDAEPRLEPLHRFANNPYTVFGLQYVPYRTLAPYRQRGIGSWYGRKFHGQRTSSGEPYDMYAMSAAHTTLPIPSYARVTNLANGRSVIVRVNDRGPFHSGRLVDLSYAAAYKLGYAGAGSASVEVEAITREDLLMIAARRRLAVPAVTAAAPRSSAEQPVAEKQAMAPAILAAASALQSESAKPVQTIPVDAEASGIYLQLGAFSGRDNAENFRIRVYQQLAWLNDAIQVYSRDGMFRLRLGPYRNRDEANGMAEKIREALQFKPVVVVR 334          
BLAST of mRNA_P-wetherbeei_contig17605.2.1 vs. uniprot
Match: UPI0019CEBB18 (Septal ring lytic transglycosylase RlpA family protein n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=UPI0019CEBB18)

HSP 1 Score: 308 bits (790), Expect = 3.300e-99
Identity = 176/312 (56.41%), Postives = 211/312 (67.63%), Query Frame = 3
Query:  486 VLALGACSSARVREDP--APAVSA-----------------PAGKPAASPGAARPGAFYKDDGPGVNPP-DFDKIADAQPRREPLHRFANNPYQVFGKDYVPIRTAGAYRERGIGSWYGRRYHGQKTSNGEIYDMYAMTAAHPTLPIPSYARVTSVANGRSVVVRINDRGPFHSGRVIDLSYVAAYKLGYAQGGSTLVEVESLLPEG-GQVAAAAPARPXXXXXXQAAPLPVSSTASGVFLQLGAFSVRDNAEVFRAKVYKELAWLNDPIEVSAQGALFRLQLGPYKSQDEARRMAERIQAELNLKPVLLVK 1358
            +LAL  C S   RE P  APA SA                 PAG P AS GA     +YKDDGPG NPP +   I DA PR E  HRFAN PYQVFGKDYVP+  A  +R+ GIGSWYGRR+HG  TS+GE YDMY MTAAHPTLPIPSY RVT+ ANGRSVVVR+NDRGPFH+ R+IDLSY AA+KLGY + GS  VEVE+LLP        A+ A P      QA+     +  +G +L+LGAFS R+ AE FR +V++ELAWL++ I V     +FRL LGPY+SQDEAR +A+RIQAELNL+P+L+ +
Sbjct:   11 LLALAGCGSVSQREAPLEAPAPSAAVQXXXXXXXXXXXXXXPAGMPPASRGA-----YYKDDGPGANPPPNLAAIPDAVPRAERPHRFANRPYQVFGKDYVPVARAAPFRQIGIGSWYGRRFHGAPTSSGEPYDMYGMTAAHPTLPIPSYVRVTNTANGRSVVVRVNDRGPFHANRIIDLSYTAAWKLGYVEAGSARVEVEALLPGSEAPTQQASKAEPAPQFGTQAS----ITEPTGFYLRLGAFSSRETAENFRVRVHRELAWLSEAIRVIGVTTVFRLHLGPYRSQDEARSIADRIQAELNLRPMLVTR 313          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17605.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001993F3171.400e-10765.68Septal ring lytic transglycosylase RlpA family pro... [more]
A0A1F3Y8T6_9PROT2.970e-10658.67Endolytic peptidoglycan transglycosylase RlpA n=1 ... [more]
A0A1F3ZCX1_9PROT6.970e-10654.57Endolytic peptidoglycan transglycosylase RlpA n=1 ... [more]
A0A1F4B8V7_9PROT1.120e-10457.24Endolytic peptidoglycan transglycosylase RlpA n=4 ... [more]
A0A1F4EX76_9PROT2.730e-10357.24Endolytic peptidoglycan transglycosylase RlpA n=1 ... [more]
A0A1F4AWB2_9PROT4.260e-10256.57Endolytic peptidoglycan transglycosylase RlpA n=1 ... [more]
A0A1F4B659_9PROT2.280e-10153.53Endolytic peptidoglycan transglycosylase RlpA n=1 ... [more]
A0A1F3YIS5_9PROT5.540e-10059.30Endolytic peptidoglycan transglycosylase RlpA n=3 ... [more]
A0A521XPR2_9PROT3.290e-9953.75Endolytic peptidoglycan transglycosylase RlpA n=1 ... [more]
UPI0019CEBB183.300e-9956.41Septal ring lytic transglycosylase RlpA family pro... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17605contigP-wetherbeei_contig17605:57..1417 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog62928.azo0179
Preferred namerlpA
PFAMsDPBB_1,SPOR
Model size1361
Max annot lvl206389|Rhodocyclales
KEGG koko:K03642
Hectar predicted targeting categorysignal peptide
Exons1
Evalue8.75e-97
EggNOG OGsCOG0797@1|root,COG3087@1|root,COG0797@2|Bacteria,COG3087@2|Bacteria,1MZ8S@1224|Proteobacteria,2VJAN@28216|Betaproteobacteria,2KUPW@206389|Rhodocyclales
DescriptionLytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
Cds size906
COG categoryDM
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186121.1983697-CDS-P-wetherbeei_contig17605:56..9621683186121.1983697-CDS-P-wetherbeei_contig17605:56..962Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17605 57..962 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186121.2126718-UTR-P-wetherbeei_contig17605:962..14171683186121.2126718-UTR-P-wetherbeei_contig17605:962..1417Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig17605 963..1417 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17605.2.1prot_P-wetherbeei_contig17605.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17605 57..962 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17605.2.1

>prot_P-wetherbeei_contig17605.2.1 ID=prot_P-wetherbeei_contig17605.2.1|Name=mRNA_P-wetherbeei_contig17605.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=302bp
MLRAAVALSLVLALGACSSARVREDPAPAVSAPAGKPAASPGAARPGAFY
KDDGPGVNPPDFDKIADAQPRREPLHRFANNPYQVFGKDYVPIRTAGAYR
ERGIGSWYGRRYHGQKTSNGEIYDMYAMTAAHPTLPIPSYARVTSVANGR
SVVVRINDRGPFHSGRVIDLSYVAAYKLGYAQGGSTLVEVESLLPEGGQV
AAAAPARPAPAPTPQAAPLPVSSTASGVFLQLGAFSVRDNAEVFRAKVYK
ELAWLNDPIEVSAQGALFRLQLGPYKSQDEARRMAERIQAELNLKPVLLV
K*
back to top

mRNA from alignment at P-wetherbeei_contig17605:57..1417-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17605.2.1 ID=mRNA_P-wetherbeei_contig17605.2.1|Name=mRNA_P-wetherbeei_contig17605.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1361bp|location=Sequence derived from alignment at P-wetherbeei_contig17605:57..1417- (Phaeothamnion wetherbeei SAG_119_79)
CTCGTTCCGCCGCTGCGCAGCCTGCGCGACCGCGATGCGCTGCGCGCGGG CCTTGCCGACGGCACCATCGACGTGATCTGCTCGGACCACACGCCGGTCG ACGAGGATGCCAAGCAGATGCCCTTCGGTGAATCCGAGGTCGGCGCGACC GGCCTGGAACTGCTGTTGCCGCTGACGCTGAAGTGGGCTGCCGAAGCGAA GCTGCCGCTCGCAAGGGCGCTCGCCAAAGTGACCAGCGACGCGGCACGCG TGCTGGGCGTGAAATCCGGCCGCATCGAGCCTGGCGCGCCGGCCGACCTC GCCTTGTTCGATCCCGCGGCGCCTTTCCGCGTCGTCCCCGCCGCGCTGCG CAGCCAGGGCAAGAACACCCCCTTCATCGGCTATGAGCTCTCCGGTCGCG TGCGCTGCACGCTGGTGGACGGCAACGTGGTCTACGAGAGCGCCCAGTAA GCGGGATGCTGCGCGCCGCAGTCGCCCTGTCCCTGGTGCTTGCCCTGGGC GCGTGCTCGTCGGCCCGGGTCCGCGAAGATCCGGCGCCCGCTGTATCCGC TCCTGCCGGCAAGCCCGCAGCCTCACCAGGCGCCGCGCGACCGGGCGCCT TCTACAAGGACGACGGCCCGGGCGTGAACCCGCCGGACTTCGACAAGATC GCCGACGCGCAGCCCCGTCGCGAGCCGCTGCACCGGTTCGCCAACAACCC CTACCAGGTCTTCGGCAAGGACTATGTCCCGATCCGTACGGCGGGCGCCT ACCGGGAGCGCGGGATCGGGAGCTGGTACGGGCGCCGTTACCACGGGCAG AAGACTTCCAACGGCGAGATCTACGACATGTACGCGATGACCGCAGCGCA TCCCACGCTGCCGATCCCGAGCTATGCCCGGGTGACGAGCGTGGCCAACG GCCGCAGCGTGGTCGTGCGGATCAACGATCGCGGCCCCTTCCACTCGGGC CGCGTCATCGACCTGTCGTACGTCGCGGCTTACAAACTGGGCTATGCGCA GGGCGGCAGCACCCTCGTCGAGGTCGAGAGCCTTTTGCCCGAGGGCGGGC AGGTGGCGGCAGCCGCACCGGCCAGGCCCGCGCCTGCTCCGACCCCCCAG GCCGCGCCCCTGCCTGTGTCGAGCACGGCCAGCGGCGTGTTCCTGCAGCT GGGCGCGTTCTCCGTGCGCGACAATGCCGAGGTCTTCCGCGCCAAGGTCT ACAAGGAGCTCGCCTGGCTGAACGACCCAATCGAGGTATCGGCCCAGGGC GCGCTGTTCCGGCTCCAGCTCGGGCCCTACAAATCGCAGGATGAAGCCCG CCGCATGGCCGAGCGCATACAGGCGGAACTGAACCTGAAGCCGGTGCTGC TGGTCAAATGA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig17605:57..1417-

>mRNA_P-wetherbeei_contig17605.2.1 ID=mRNA_P-wetherbeei_contig17605.2.1|Name=mRNA_P-wetherbeei_contig17605.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=906bp|location=Sequence derived from alignment at P-wetherbeei_contig17605:57..1417- (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGCGCGCCGCAGTCGCCCTGTCCCTGGTGCTTGCCCTGGGCGCGTG
CTCGTCGGCCCGGGTCCGCGAAGATCCGGCGCCCGCTGTATCCGCTCCTG
CCGGCAAGCCCGCAGCCTCACCAGGCGCCGCGCGACCGGGCGCCTTCTAC
AAGGACGACGGCCCGGGCGTGAACCCGCCGGACTTCGACAAGATCGCCGA
CGCGCAGCCCCGTCGCGAGCCGCTGCACCGGTTCGCCAACAACCCCTACC
AGGTCTTCGGCAAGGACTATGTCCCGATCCGTACGGCGGGCGCCTACCGG
GAGCGCGGGATCGGGAGCTGGTACGGGCGCCGTTACCACGGGCAGAAGAC
TTCCAACGGCGAGATCTACGACATGTACGCGATGACCGCAGCGCATCCCA
CGCTGCCGATCCCGAGCTATGCCCGGGTGACGAGCGTGGCCAACGGCCGC
AGCGTGGTCGTGCGGATCAACGATCGCGGCCCCTTCCACTCGGGCCGCGT
CATCGACCTGTCGTACGTCGCGGCTTACAAACTGGGCTATGCGCAGGGCG
GCAGCACCCTCGTCGAGGTCGAGAGCCTTTTGCCCGAGGGCGGGCAGGTG
GCGGCAGCCGCACCGGCCAGGCCCGCGCCTGCTCCGACCCCCCAGGCCGC
GCCCCTGCCTGTGTCGAGCACGGCCAGCGGCGTGTTCCTGCAGCTGGGCG
CGTTCTCCGTGCGCGACAATGCCGAGGTCTTCCGCGCCAAGGTCTACAAG
GAGCTCGCCTGGCTGAACGACCCAATCGAGGTATCGGCCCAGGGCGCGCT
GTTCCGGCTCCAGCTCGGGCCCTACAAATCGCAGGATGAAGCCCGCCGCA
TGGCCGAGCGCATACAGGCGGAACTGAACCTGAAGCCGGTGCTGCTGGTC
AAATGA
back to top