mRNA_P-wetherbeei_contig1759.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1759.1.1
Unique NamemRNA_P-wetherbeei_contig1759.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1759.1.1 vs. uniprot
Match: A0A353LUA3_9PROT (MFS transporter (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A353LUA3_9PROT)

HSP 1 Score: 112 bits (279), Expect = 6.950e-29
Identity = 58/91 (63.74%), Postives = 72/91 (79.12%), Query Frame = 1
Query:    4 AEYAYIFCGILLGIFAGPAQAASRTLLARLAPQNMIGEFYGLYAMTGKATSFLAPLTIGLVTAAFVSQRAGLAVIILFLLSGFLLLLRVRD 276
            AE+AYI  G + GIF GPAQAASR+L+ARLAP+ M  EF+GL+A++GKATSFLAPL IG+ T  F  QR+G+ VI+ FL  GFLLLL VR+
Sbjct:  115 AEWAYICFGSMFGIFGGPAQAASRSLMARLAPRGMAAEFFGLFALSGKATSFLAPLAIGVTTGLFNDQRSGMLVILFFLALGFLLLLPVRE 205          
BLAST of mRNA_P-wetherbeei_contig1759.1.1 vs. uniprot
Match: A0A355T5C4_9HYPH (MFS transporter (Fragment) n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A355T5C4_9HYPH)

HSP 1 Score: 111 bits (278), Expect = 1.670e-28
Identity = 58/90 (64.44%), Postives = 72/90 (80.00%), Query Frame = 1
Query:    7 EYAYIFCGILLGIFAGPAQAASRTLLARLAPQNMIGEFYGLYAMTGKATSFLAPLTIGLVTAAFVSQRAGLAVIILFLLSGFLLLLRVRD 276
            E  Y+  G+L+GI  GPAQAASRT +ARLAP++M+ EF+GLYA++GKATSF+AP  I L TAA  SQRAGL V++ FLL GFLLLL VR+
Sbjct:  140 EQVYMVAGVLIGISGGPAQAASRTFMARLAPKDMMTEFFGLYALSGKATSFVAPFVIALATAAANSQRAGLFVVVAFLLVGFLLLLPVRE 229          
BLAST of mRNA_P-wetherbeei_contig1759.1.1 vs. uniprot
Match: A0A352KE63_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KE63_9PROT)

HSP 1 Score: 112 bits (279), Expect = 6.250e-28
Identity = 58/91 (63.74%), Postives = 72/91 (79.12%), Query Frame = 1
Query:    4 AEYAYIFCGILLGIFAGPAQAASRTLLARLAPQNMIGEFYGLYAMTGKATSFLAPLTIGLVTAAFVSQRAGLAVIILFLLSGFLLLLRVRD 276
            AE+AYI  G + GIF GPAQAASR+L+ARLAP+ M  EF+GL+A++GKATSFLAPL IG+ T  F  QR+G+ VI+ FL  GFLLLL VR+
Sbjct:  217 AEWAYICFGSMFGIFGGPAQAASRSLMARLAPRGMAAEFFGLFALSGKATSFLAPLAIGVTTGLFNDQRSGMLVILFFLALGFLLLLPVRE 307          
BLAST of mRNA_P-wetherbeei_contig1759.1.1 vs. uniprot
Match: UPI0019AB1567 (MFS transporter n=1 Tax=Tardiphaga sp. TaxID=1926292 RepID=UPI0019AB1567)

HSP 1 Score: 105 bits (263), Expect = 2.550e-27
Identity = 52/91 (57.14%), Postives = 72/91 (79.12%), Query Frame = 1
Query:    4 AEYAYIFCGILLGIFAGPAQAASRTLLARLAPQNMIGEFYGLYAMTGKATSFLAPLTIGLVTAAFVSQRAGLAVIILFLLSGFLLLLRVRD 276
            AE AY+  G L+GI  GP QAASRTLL R+AP++ I +F+GL+A+TGK TSF+ PL IG++TA   SQ+AG+AV++LF ++G +LL RV+D
Sbjct:   47 AERAYLALGCLIGIAGGPLQAASRTLLIRMAPKDRIAQFFGLFALTGKVTSFIGPLMIGILTAITASQKAGMAVLVLFFVAGLVLLARVKD 137          
BLAST of mRNA_P-wetherbeei_contig1759.1.1 vs. uniprot
Match: A0A351T2C6_9PROT (MFS transporter n=4 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A351T2C6_9PROT)

HSP 1 Score: 112 bits (279), Expect = 3.810e-27
Identity = 58/91 (63.74%), Postives = 72/91 (79.12%), Query Frame = 1
Query:    4 AEYAYIFCGILLGIFAGPAQAASRTLLARLAPQNMIGEFYGLYAMTGKATSFLAPLTIGLVTAAFVSQRAGLAVIILFLLSGFLLLLRVRD 276
            AE+AYI  G + GIF GPAQAASR+L+ARLAP+ M  EF+GL+A++GKATSFLAPL IG+ T  F  QR+G+ VI+ FL  GFLLLL VR+
Sbjct:  349 AEWAYICFGSMFGIFGGPAQAASRSLMARLAPRGMAAEFFGLFALSGKATSFLAPLAIGVTTGLFNDQRSGMLVILFFLALGFLLLLPVRE 439          
BLAST of mRNA_P-wetherbeei_contig1759.1.1 vs. uniprot
Match: A0A2E5BUC0_9HYPH (MFS transporter n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2E5BUC0_9HYPH)

HSP 1 Score: 111 bits (278), Expect = 6.250e-27
Identity = 60/92 (65.22%), Postives = 72/92 (78.26%), Query Frame = 1
Query:    1 TAEYAYIFCGILLGIFAGPAQAASRTLLARLAPQNMIGEFYGLYAMTGKATSFLAPLTIGLVTAAFVSQRAGLAVIILFLLSGFLLLLRVRD 276
             AE  Y+F G+L+G+  GPAQAASRT LARLAP  M+ EF+GLYA++GKATSF+APL IGLVTAA   QRAGL V++ FL  G LLLL VR+
Sbjct:  368 VAEGFYLFGGVLIGLSGGPAQAASRTFLARLAPPEMMNEFFGLYALSGKATSFIAPLVIGLVTAAAGHQRAGLFVVLGFLFVGLLLLLPVRE 459          
BLAST of mRNA_P-wetherbeei_contig1759.1.1 vs. uniprot
Match: A0A2Z4UNQ2_9HYPH (Vacuole effluxer Atg22 like protein n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2Z4UNQ2_9HYPH)

HSP 1 Score: 111 bits (277), Expect = 9.310e-27
Identity = 58/90 (64.44%), Postives = 72/90 (80.00%), Query Frame = 1
Query:    7 EYAYIFCGILLGIFAGPAQAASRTLLARLAPQNMIGEFYGLYAMTGKATSFLAPLTIGLVTAAFVSQRAGLAVIILFLLSGFLLLLRVRD 276
            E  Y+  G+L+GI  GPAQAASRT +ARLAP++M+ EF+GLYA++GKATSF+AP  I L TAA  SQRAGL V++ FLL GFLLLL VR+
Sbjct:  380 EQVYMAAGVLIGISGGPAQAASRTFMARLAPKDMMTEFFGLYALSGKATSFVAPFVIALATAAANSQRAGLFVVVAFLLVGFLLLLPVRE 469          
BLAST of mRNA_P-wetherbeei_contig1759.1.1 vs. uniprot
Match: A0A2D8XHN0_9HYPH (MFS domain-containing protein n=1 Tax=Parvibaculum sp. TaxID=2024848 RepID=A0A2D8XHN0_9HYPH)

HSP 1 Score: 108 bits (269), Expect = 2.200e-26
Identity = 57/90 (63.33%), Postives = 69/90 (76.67%), Query Frame = 1
Query:    7 EYAYIFCGILLGIFAGPAQAASRTLLARLAPQNMIGEFYGLYAMTGKATSFLAPLTIGLVTAAFVSQRAGLAVIILFLLSGFLLLLRVRD 276
            E  Y+  GIL+GI  GPAQAASRT +ARLAP  M+ EF+GLYA++GKATSF+AP  I L T A  SQRAGL V++ FLL GF+LLL VR+
Sbjct:  230 EQVYMAAGILIGISGGPAQAASRTFMARLAPNEMMTEFFGLYALSGKATSFVAPFVIALATVAANSQRAGLFVVVAFLLVGFVLLLPVRE 319          
BLAST of mRNA_P-wetherbeei_contig1759.1.1 vs. uniprot
Match: A0A845Q9K6_9HYPH (MFS transporter n=1 Tax=Pyruvatibacter mobilis TaxID=1712261 RepID=A0A845Q9K6_9HYPH)

HSP 1 Score: 110 bits (274), Expect = 2.470e-26
Identity = 56/90 (62.22%), Postives = 72/90 (80.00%), Query Frame = 1
Query:    7 EYAYIFCGILLGIFAGPAQAASRTLLARLAPQNMIGEFYGLYAMTGKATSFLAPLTIGLVTAAFVSQRAGLAVIILFLLSGFLLLLRVRD 276
            E  Y+  GIL+G+  GPAQAASRTL+AR+AP +M+ EF+GLYA++GKAT+FLAPL I   T A+ SQRAGL VI+ FL+ GF+LLL VR+
Sbjct:  379 EQIYLLFGILIGMAGGPAQAASRTLMARMAPPSMMTEFFGLYALSGKATAFLAPLAIAWATTAYASQRAGLIVIVAFLVIGFMLLLGVRE 468          
BLAST of mRNA_P-wetherbeei_contig1759.1.1 vs. uniprot
Match: A0A081B6I9_9HYPH (Major facilitator superfamily MFS_1 n=1 Tax=Tepidicaulis marinus TaxID=1333998 RepID=A0A081B6I9_9HYPH)

HSP 1 Score: 109 bits (273), Expect = 3.510e-26
Identity = 58/91 (63.74%), Postives = 72/91 (79.12%), Query Frame = 1
Query:    4 AEYAYIFCGILLGIFAGPAQAASRTLLARLAPQNMIGEFYGLYAMTGKATSFLAPLTIGLVTAAFVSQRAGLAVIILFLLSGFLLLLRVRD 276
            AE  Y+  GIL+G+F GPAQAASRTLLARLAP +M+ EF+GLY+++GKATSF+AP  I + T  + SQRAGLAVII FL+ G L LL VR+
Sbjct:  382 AEQVYLLSGILIGVFGGPAQAASRTLLARLAPASMMTEFFGLYSLSGKATSFIAPFAIAVATGIYESQRAGLAVIIGFLVIGLLGLLFVRE 472          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1759.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A353LUA3_9PROT6.950e-2963.74MFS transporter (Fragment) n=1 Tax=Alphaproteobact... [more]
A0A355T5C4_9HYPH1.670e-2864.44MFS transporter (Fragment) n=1 Tax=Rhodobiaceae ba... [more]
A0A352KE63_9PROT6.250e-2863.74Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
UPI0019AB15672.550e-2757.14MFS transporter n=1 Tax=Tardiphaga sp. TaxID=19262... [more]
A0A351T2C6_9PROT3.810e-2763.74MFS transporter n=4 Tax=Alphaproteobacteria bacter... [more]
A0A2E5BUC0_9HYPH6.250e-2765.22MFS transporter n=1 Tax=Rhodobiaceae bacterium Tax... [more]
A0A2Z4UNQ2_9HYPH9.310e-2764.44Vacuole effluxer Atg22 like protein n=1 Tax=Rhodob... [more]
A0A2D8XHN0_9HYPH2.200e-2663.33MFS domain-containing protein n=1 Tax=Parvibaculum... [more]
A0A845Q9K6_9HYPH2.470e-2662.22MFS transporter n=1 Tax=Pyruvatibacter mobilis Tax... [more]
A0A081B6I9_9HYPH3.510e-2663.74Major facilitator superfamily MFS_1 n=1 Tax=Tepidi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1759contigP-wetherbeei_contig1759:131..415 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1282876.BAOK01000002_gene278
Preferred nameMA20_25070
PFAMsATG22
Model size285
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K06902
KEGG TC2.A.1.24,9.A.15.1
KEGG Pathwayko04138,map04138
Hectar predicted targeting categorysignal peptide
Exons1
Evalue2.11e-27
EggNOG OGsCOG2270@1|root,COG2270@2|Bacteria,1MWXB@1224|Proteobacteria,2TSCV@28211|Alphaproteobacteria,4BPRY@82117|unclassified Alphaproteobacteria
DescriptionVacuole effluxer Atg22 like
Cds size285
COG categoryS
BRITEko00000,ko00001,ko02000,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186120.6217458-CDS-P-wetherbeei_contig1759:130..4151683186120.6217458-CDS-P-wetherbeei_contig1759:130..415Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1759 131..415 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1759.1.1prot_P-wetherbeei_contig1759.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1759 131..415 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1759.1.1

>prot_P-wetherbeei_contig1759.1.1 ID=prot_P-wetherbeei_contig1759.1.1|Name=mRNA_P-wetherbeei_contig1759.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=95bp
TAEYAYIFCGILLGIFAGPAQAASRTLLARLAPQNMIGEFYGLYAMTGKA
TSFLAPLTIGLVTAAFVSQRAGLAVIILFLLSGFLLLLRVRDAD*
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mRNA from alignment at P-wetherbeei_contig1759:131..415-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1759.1.1 ID=mRNA_P-wetherbeei_contig1759.1.1|Name=mRNA_P-wetherbeei_contig1759.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=285bp|location=Sequence derived from alignment at P-wetherbeei_contig1759:131..415- (Phaeothamnion wetherbeei SAG_119_79)
ACGGCGGAATACGCCTATATTTTCTGCGGCATTCTGCTGGGAATTTTTGC GGGCCCCGCACAGGCCGCCAGCCGCACTTTGCTGGCCCGTTTGGCGCCAC AGAATATGATCGGGGAATTTTACGGTCTTTACGCCATGACCGGCAAGGCC ACTTCGTTTCTGGCGCCGCTGACAATTGGTCTGGTGACGGCGGCCTTTGT ATCGCAGCGCGCCGGGCTGGCGGTGATTATCCTGTTCCTGCTGAGCGGAT TTTTATTATTGCTGCGGGTGCGCGACGCGGATTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1759:131..415-

>mRNA_P-wetherbeei_contig1759.1.1 ID=mRNA_P-wetherbeei_contig1759.1.1|Name=mRNA_P-wetherbeei_contig1759.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=285bp|location=Sequence derived from alignment at P-wetherbeei_contig1759:131..415- (Phaeothamnion wetherbeei SAG_119_79)
ACGGCGGAATACGCCTATATTTTCTGCGGCATTCTGCTGGGAATTTTTGC
GGGCCCCGCACAGGCCGCCAGCCGCACTTTGCTGGCCCGTTTGGCGCCAC
AGAATATGATCGGGGAATTTTACGGTCTTTACGCCATGACCGGCAAGGCC
ACTTCGTTTCTGGCGCCGCTGACAATTGGTCTGGTGACGGCGGCCTTTGT
ATCGCAGCGCGCCGGGCTGGCGGTGATTATCCTGTTCCTGCTGAGCGGAT
TTTTATTATTGCTGCGGGTGCGCGACGCGGATTAG
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