mRNA_P-wetherbeei_contig17588.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17588.1.1 vs. uniprot
Match: A0A2W4M8F6_9PROT (Efflux transporter periplasmic adaptor subunit n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4M8F6_9PROT) HSP 1 Score: 286 bits (732), Expect = 3.160e-91 Identity = 154/306 (50.33%), Postives = 211/306 (68.95%), Query Frame = 1
Query: 82 VAAALTQDVQDSDEFPGRIEATQAVKVRARVNGYLNKVLFTPGTEVKQGEVLFEIDPRPFKAKVGEAEAALAATVAQLDLAKLEAARQQQMLSSHATSRREFDAATALVKSLEASRAANRATLANVRLDLEFTRVTAPISGRVGKDEVTVGNLVQGENPDSPVLTTLVSVDPIYVSFEADERAFLKYIATSRGQSLPVQVGLIDETGFPHQAKLQFVDNNVDVASGTVRMRALLDNAARRFTPGLFARVRIEAATGARRVVLVADRAIGTDQSKRFVLVVGDDKLAAYREVHIGRKVGNLRIIESG 999
VA+A + V SD F GR+ A ++V+VRARV GY+ +V F G V++G+VL IDPRPF+A + AEA +AA +L+LA+ E AR +Q++ +ATSR+E D + V A+ A +A +RLDL +TR+ API GRVG+ E+T GNLVQGE PD P+LTT+V++ PIY FE DER +L+Y G+ +PV +GL +E GFP + +L FVDN VD +GTVRMRALLDN+ TPGL+ARV++ + AR V+V DRAIGTDQ ++FV+VV +D A YREV +G + + R+IE G
Sbjct: 39 VASAEARTVVRSDVFTGRLAAVESVEVRARVTGYIEEVRFKQGEMVRKGDVLMIIDPRPFEANMARAEAEVAAAKTRLELARKELARSEQLVKVNATSRQELDQRASAVDDALAALRAAQAQANRLRLDLAYTRIVAPIDGRVGRIEITAGNLVQGEIPDPPLLTTIVAITPIYAEFEVDERVYLEYGLNKPGKRMPVYIGLANEEGFPRKGELVFVDNQVDPTTGTVRMRALLDNSDGSLTPGLYARVKLADESQAREAVVVPDRAIGTDQDRKFVMVVDEDNKATYREVKLGPLLAHERVIERG 344
BLAST of mRNA_P-wetherbeei_contig17588.1.1 vs. uniprot
Match: A0A841HKI6_9GAMM (RND family efflux transporter MFP subunit n=1 Tax=Povalibacter uvarum TaxID=732238 RepID=A0A841HKI6_9GAMM) HSP 1 Score: 275 bits (703), Expect = 1.270e-86 Identity = 161/337 (47.77%), Postives = 217/337 (64.39%), Query Frame = 1
Query: 13 LSACQPPAPPSXXXXXXXXXXVSVAAALTQDVQDSDEFPGRIEATQAVKVRARVNGYLNKVLFTPGTEVKQGEVLFEIDPRPFKAKVGEAEAALAATVAQLDLAKLEAARQQQMLSSHATSRREFDAATALVKSLEASRAANRATLANVRLDLEFTRVTAPISGRVGKDEVTVGNLVQGENPDSPVLTTLVSVDPIYVSFEADERAFLKYI--------ATSRGQSLPVQVGLIDETGFPHQAKLQFVDNNVDVASGTVRMRALLDNAARRFTPGLFARVRIEAATGARRVVLVADRAIGTDQSKRFVLVVGDDKLAAYREVHIGRKVGNLRIIESG 999
LS C A PS V+VAAAL +DV + DEF GR+EA ++V++R RV GY+ V FT G+ V+QG++LF IDPRP++A + +A A L A+ +LA+ + AR +++L+ A S+ E+D + +A+ AA +A + + RLDLEFTRVTAPISGRV K EVT GNLV +P+LTT+VS+DPIYVSFE DE+ +LKY A+SR + PVQ+GL +E G+PH + FVDN +D +GT+R RA N FTPGLFARV++ + VLV DRA+GTDQS++FV VV D YR V IGR LRI++ G
Sbjct: 25 LSGCSSEATPSGPAQGTP---VTVAAALQRDVTEWDEFTGRVEAVESVEIRPRVTGYIESVNFTEGSTVRQGDLLFVIDPRPYRAALDKAAAELTRAKARAELARNDIARSEKLLAIKAVSQEEYDQRVNGAREADATVAAAQAAVESARLDLEFTRVTAPISGRVSKAEVTAGNLVTAGAGTAPLLTTVVSIDPIYVSFEGDEQVYLKYTELARRGERASSRDAANPVQMGLANEDGYPHTGTMVFVDNRIDPRTGTIRARASFSNKDGYFTPGLFARVKL-LGHNSYPAVLVDDRAVGTDQSQKFVYVVDADNKVTYRAVKIGRLNDGLRIVQQG 357
BLAST of mRNA_P-wetherbeei_contig17588.1.1 vs. uniprot
Match: A0A7W0JY25_9BACT (Efflux RND transporter periplasmic adaptor subunit n=3 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A7W0JY25_9BACT) HSP 1 Score: 274 bits (700), Expect = 2.430e-86 Identity = 150/316 (47.47%), Postives = 209/316 (66.14%), Query Frame = 1
Query: 76 VSVAAALTQDVQDSDEFPGRIEATQAVKVRARVNGYLNKVLFTPGTEVKQGEVLFEIDPRPFKAKVGEAEAALAATVAQLDLAKLEAARQQQMLSSHATSRREFDAATALVKSLEASRAANRATLANVRLDLEFTRVTAPISGRVGKDEVTVGNLVQGENPDSPVLTTLVSVDPIYVSFEADERAFLKYIA--------TSRGQSLPVQVGLIDETGFPHQAKLQFVDNNVDVASGTVRMRALLDNAARRFTPGLFARVRIEAATGARRVVLVADRAIGTDQSKRFVLVVGDDKLAAYREVHIGRKVGNLRIIESG 999
V+VAA +DV++ DEF GR+EA AV++R RV+GY+++V F G V++G+VLFEIDPRP+ A + AEA L A+ +LA + R +++++ A SR E D+ TA EA+ A A + RLDLE+T+V +PISGRVG+ EVT GNLVQ + D+ +LTT+VS+DPIYV FE DE+ +LKY A SR P+Q+GL DE GFPH+ + FVDN ++ +GT+R RA+ N RFTPGLFAR+R+ +G LV DRA+GTDQ K+FV+V+ D YR V +GR + R+++SG
Sbjct: 36 VTVAAVPERDVREWDEFTGRLEAVDAVEIRPRVSGYIHRVAFNEGNGVRKGQVLFEIDPRPYAAALARAEAELEVARARSELAGRDVIRAERLVAVQAISREELDSRTAGQAENEAAVRAAEAAVTTARLDLEWTKVRSPISGRVGRAEVTEGNLVQAGSADAALLTTVVSLDPIYVYFEGDEQTYLKYSALARDGSRPNSRDNRTPIQLGLSDEQGFPHEGYVDFVDNQLNAEAGTIRFRAVFSNKDHRFTPGLFARIRL-VGSGTYPAKLVLDRAVGTDQDKKFVMVLKPDSTVDYRPVQLGRLIDGFRVVDSG 350
BLAST of mRNA_P-wetherbeei_contig17588.1.1 vs. uniprot
Match: UPI001933B1A2 (efflux RND transporter periplasmic adaptor subunit n=1 Tax=Steroidobacter gossypii TaxID=2805490 RepID=UPI001933B1A2) HSP 1 Score: 274 bits (701), Expect = 3.040e-86 Identity = 150/316 (47.47%), Postives = 214/316 (67.72%), Query Frame = 1
Query: 76 VSVAAALTQDVQDSDEFPGRIEATQAVKVRARVNGYLNKVLFTPGTEVKQGEVLFEIDPRPFKAKVGEAEAALAATVAQLDLAKLEAARQQQMLSSHATSRREFDAATALVKSLEASRAANRATLANVRLDLEFTRVTAPISGRVGKDEVTVGNLVQGENPDSPVLTTLVSVDPIYVSFEADERAFLKYIA--------TSRGQSLPVQVGLIDETGFPHQAKLQFVDNNVDVASGTVRMRALLDNAARRFTPGLFARVRIEAATGARRVVLVADRAIGTDQSKRFVLVVGDDKLAAYREVHIGRKVGNLRIIESG 999
VSVAAAL ++VQ+ DEF GR+EA ++V++R RV GY+ V F G+ VK+G++LF IDPRP++A + +AEA LA +A+ +LA + R +++L + A SR E+D + +A+ A RA + +L+LEFTRV +PI+GRV + EVT GNLV G + + +LTT+VS+DPIYV+FE DE+ +LKY +SR + PV + L +E GFPH+ ++ FVDN VD +GT+R RA DN TPGLFARV++ + +VVLV DRA+GTDQS++FV VV +D +YR+V +GR LRI+E G
Sbjct: 49 VSVAAALEREVQEWDEFTGRLEAVESVEIRPRVTGYIESVNFDQGSVVKKGDLLFVIDPRPYRAALDQAEAELARAIARAELATNDVERSEKLLDAKAVSREEYDQRINAQRESQANVEAARAAVTAAKLNLEFTRVVSPINGRVSRAEVTAGNLVTGGSTQATLLTTVVSIDPIYVTFEGDEQVYLKYTELARRGDRPSSRDAANPVLMALANEQGFPHEGRMSFVDNQVDPRTGTIRARASFDNKDGYLTPGLFARVKL-LGHSSHKVVLVDDRAVGTDQSEKFVYVVDNDNKVSYRQVKVGRLTDGLRIVEEG 363
BLAST of mRNA_P-wetherbeei_contig17588.1.1 vs. uniprot
Match: UPI00143C62DD (efflux RND transporter periplasmic adaptor subunit n=1 Tax=Solimonas marina TaxID=2714601 RepID=UPI00143C62DD) HSP 1 Score: 273 bits (699), Expect = 5.720e-86 Identity = 161/336 (47.92%), Postives = 218/336 (64.88%), Query Frame = 1
Query: 16 SACQPPAPPSXXXXXXXXXXVSVAAALTQDVQDSDEFPGRIEATQAVKVRARVNGYLNKVLFTPGTEVKQGEVLFEIDPRPFKAKVGEAEAALAATVAQLDLAKLEAARQQQMLSSHATSRREFDAATALVKSLEASRAANRATLANVRLDLEFTRVTAPISGRVGKDEVTVGNLVQGENPDSPVLTTLVSVDPIYVSFEADERAFLKYIA-TSRGQ-------SLPVQVGLIDETGFPHQAKLQFVDNNVDVASGTVRMRALLDNAARRFTPGLFARVRIEAATGARRVVLVADRAIGTDQSKRFVLVVGDDKLAAYREVHIGRKVGNLRIIESG 999
+A PPAP V+V AA+ Q++ D D + GR ATQ V++R RV GY+++V F G+ VKQG++LF+IDPRPF+A++ +A+A LA +Q +LAK EAAR + +L HA SR E+D+ + + AS A +A + + LDL FTRVTAPI GRV + EVT GN V +LT++VSVDPIYV F+ DER++LKY A SRG+ +LPV VGL DE GFPH ++ F+DN +D +GT+R RA+L N RFTPGLFARV++ +G L+ +RAIGTDQSK+FV VV D YR V +G + G LR++ SG
Sbjct: 39 AAATPPAP-----------QVTVRAAVQQNIVDWDTYTGRFAATQRVELRPRVAGYIDRVAFDEGSVVKQGQLLFQIDPRPFQARLDQAKAELARAQSQQELAKTEAARAENLLKVHAISREEYDSRASNLGQTTASLRAAQAAVESAALDLSFTRVTAPIGGRVSRAEVTAGNYVSA---GQTILTSVVSVDPIYVYFDGDERSYLKYAAQASRGERPSERDHALPVFVGLADENGFPHAGRIDFLDNALDPQTGTIRARAVLPNPDGRFTPGLFARVQL-LGSGRHEATLLDERAIGTDQSKKFVYVVDDQNKVQYRAVTLGSEHGGLRVVTSG 359
BLAST of mRNA_P-wetherbeei_contig17588.1.1 vs. uniprot
Match: A0A829Y500_9GAMM (Resistance-nodulation-cell division (RND) multidrug efflux membrane fusion protein MexE n=4 Tax=Steroidobacter TaxID=469322 RepID=A0A829Y500_9GAMM) HSP 1 Score: 272 bits (696), Expect = 1.620e-85 Identity = 153/316 (48.42%), Postives = 210/316 (66.46%), Query Frame = 1
Query: 76 VSVAAALTQDVQDSDEFPGRIEATQAVKVRARVNGYLNKVLFTPGTEVKQGEVLFEIDPRPFKAKVGEAEAALAATVAQLDLAKLEAARQQQMLSSHATSRREFDAATALVKSLEASRAANRATLANVRLDLEFTRVTAPISGRVGKDEVTVGNLVQGENPDSPVLTTLVSVDPIYVSFEADERAFLKYIA--------TSRGQSLPVQVGLIDETGFPHQAKLQFVDNNVDVASGTVRMRALLDNAARRFTPGLFARVRIEAATGARRVVLVADRAIGTDQSKRFVLVVGDDKLAAYREVHIGRKVGNLRIIESG 999
VSVAAAL +DVQ+ DEF GR+EA ++V++R RV GY+ V FT G+ VK+GE+LF IDPRP++A + +AEA LA VA+ +L+ + R +++L A SR E+D + +A+ A RA + +L+LEFTRVTAPI+GRV + VT GNLV G + + +LTTLVS+DPIYV+FE DE+ +LKY +SR + PV + L +E GFPH+ + FVDN VD +GT+R RA +N TPGLFARV++ + + VLV DRAIGTDQS++FV VV + +YR V +GR LRI+E G
Sbjct: 49 VSVAAALERDVQEWDEFTGRLEAVESVEIRPRVTGYIESVNFTEGSIVKKGELLFVIDPRPYRADLSKAEAELARAVARAELSNTDVVRSEKLLGVKAVSREEYDQRLNAQRESQANVEAARAAVTAAKLNLEFTRVTAPITGRVSRAVVTAGNLVTGGSTQATLLTTLVSIDPIYVTFEGDEQVYLKYTELARRGDRPSSRDAANPVLMALANEQGFPHKGAMTFVDNQVDPRTGTIRARASFENKDGYLTPGLFARVKL-LGHSSHKTVLVDDRAIGTDQSQKFVYVVDGENKVSYRSVKVGRLTDGLRIVEDG 363
BLAST of mRNA_P-wetherbeei_contig17588.1.1 vs. uniprot
Match: A0A2D2DPN9_9BURK (Efflux transporter periplasmic adaptor subunit n=11 Tax=Massilia TaxID=149698 RepID=A0A2D2DPN9_9BURK) HSP 1 Score: 271 bits (692), Expect = 1.030e-84 Identity = 143/310 (46.13%), Postives = 214/310 (69.03%), Query Frame = 1
Query: 76 VSVAAALTQDVQDSDEFPGRIEATQAVKVRARVNGYLNKVLFTPGTEVKQGEVLFEIDPRPFKAKVGEAEAALAATVAQLDLAKLEAARQQQMLSSHATSRREFDAATALVKSLEASRAANRATLANVRLDLEFTRVTAPISGRVGKDEVTVGNLVQGENPDSPVLTTLVSVDPIYVSFEADERAFLKY-IATSRGQSLPVQVGLIDETGFPHQAKLQFVDNNVDVASGTVRMRALLDNAARRFTPGLFARVRIEAATGAR-RVVLVADRAIGTDQSKRFVLVVGDDKLAAYREVHIGRKVGNLRIIESG 999
++ A + + V ++ EF GR+EA V +RARVNG++ V F PG+ VK+G++LF IDPRP++A+ AEAA+++ A+ DLAKLE AR +++L A ++REFD + +K L+A+ A +A+L RL+L +T V API GRV K EVT GNLV G + +LT++VS +PIY +F+ DE +L+ +G ++PV++GL +E+GFPH+ KL+FVDN +D A+G+VRMRA+ DN PGLFARV++ + + + VL++DRAIGTDQ+++FV V+G D A YR V +G + LR++ SG
Sbjct: 46 ITAATVIERSVNETQEFSGRLEAVDRVDIRARVNGFITSVNFKPGSVVKKGDILFVIDPRPYQAEANRAEAAVSSARARADLAKLELARAERLLGDKAIAQREFDEKASGLKELDANVRAAQASLEAARLNLSYTNVHAPIGGRVSKAEVTTGNLVDG----TVILTSVVSSNPIYATFDGDEDTYLRVGRVAQKGATVPVKIGLANESGFPHEGKLEFVDNRLDSATGSVRMRAMFDNTDNTLVPGLFARVQLSGSDSTQAKTVLISDRAIGTDQNRKFVYVIGADSKAEYRAVTLGPSIDGLRVVRSG 351
BLAST of mRNA_P-wetherbeei_contig17588.1.1 vs. uniprot
Match: A0A838HDT4_9BACT (Efflux RND transporter periplasmic adaptor subunit n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A838HDT4_9BACT) HSP 1 Score: 270 bits (689), Expect = 1.200e-84 Identity = 156/341 (45.75%), Postives = 219/341 (64.22%), Query Frame = 1
Query: 1 LALFLSACQPPAPPSXXXXXXXXXXVSVAAALTQDVQDSDEFPGRIEATQAVKVRARVNGYLNKVLFTPGTEVKQGEVLFEIDPRPFKAKVGEAEAALAATVAQLDLAKLEAARQQQMLSSHATSRREFDAATALVKSLEASRAANRATLANVRLDLEFTRVTAPISGRVGKDEVTVGNLVQGENPDSPVLTTLVSVDPIYVSFEADERAFLKY--------IATSRGQSLPVQVGLIDETGFPHQAKLQFVDNNVDVASGTVRMRALLDNAARRFTPGLFARVRIEAATGARRVVLVADRAIGTDQSKRFVLVVGDDKLAAYREVHIGRKVGNLRIIESG 999
+AL S C APP XX V+VA + +++ + DEF GR++A AV++R +V+G + +V FT GTEV++G++LF IDPRP++A++ A+A L T Q +LAK + R Q +++ A SR EFD A ++ AS A A +A RLD+E+TRV +PI GRV + EVT GNLV P + +LTT++S+DPIYV FE DE+ +LKY A+SR P+ +GL +E GFPH+ + FVDN +D ++GT+R RA+ NA FTPGLFAR+++ +G R VLV D AIGTDQ K+FVLV+ D YR + +GR V LRI+ SG
Sbjct: 20 IALIASGCGGDAPPXXXAPQ-----VTVATVIGREINEWDEFTGRLQAVDAVEIRPQVSGKIQRVGFTEGTEVRKGDLLFVIDPRPYQAELDRAQAELERTRTQAELAKRDLERAQTLVAKEAISREEFDIRAAALEESGASIRAAEANVAQARLDVEWTRVRSPIDGRVSRAEVTAGNLVDAGPPSATLLTTVMSIDPIYVYFEGDEQTYLKYGRLSRSGERASSRDSRNPIFLGLSNEEGFPHEGYVDFVDNQLDPSTGTIRARAVFSNARGMFTPGLFARLKL-IGSGRYRAVLVRDSAIGTDQDKKFVLVLKADNTVEYRRIELGRLVEGLRIVSSG 354
BLAST of mRNA_P-wetherbeei_contig17588.1.1 vs. uniprot
Match: A0A1Q6ZKZ5_9BACT (HlyD_D23 domain-containing protein n=1 Tax=Gemmatimonadetes bacterium 13_2_20CM_2_65_7 TaxID=1805202 RepID=A0A1Q6ZKZ5_9BACT) HSP 1 Score: 267 bits (683), Expect = 7.130e-84 Identity = 155/313 (49.52%), Postives = 206/313 (65.81%), Query Frame = 1
Query: 76 VSVAAALTQDVQDSDEFPGRIEATQAVKVRARVNGYLNKVLFTPGTEVKQGEVLFEIDPRPFKAKVGEAEAALAATVAQLDLAKLEAARQQQMLSSHATSRREFDA-ATALVKSLEASRAANRATLANVRLDLEFTRVTAPISGRVGKDEVTVGNLVQGENPDSPVLTTLVSVDPIYVSFEADERAFLKYIATSRGQSL----PVQVGLIDETGFPHQAKLQFVDNNVDVASGTVRMRALLDNAARRFTPGLFARVRIEAATGARRVVLVADRAIGTDQSKRFVLVVGDDKLAAYREVHIGRKVGNLRIIESG 999
V+VAA DV D DEF GR+EA AV++R RV+GY+ +V FT GTEV++GEVLFEIDPRP+ A + AEA L T LA + +R Q+++ + A SR EFD TA + A R A A LA RL+LE+T V +PI+GRV + VTVGNLVQ P + +LTT+VSVDPIY + DE+ +LKY A +R + PV +GL +E GFPH+ L FVDN ++ +GT+R+RA+ N R FTPGLFAR+++ A +G R L+ D AIGTDQ K+FVLV+ D AYR V +G V LR++ +G
Sbjct: 33 VTVAAVAEHDVTDWDEFTGRLEAVDAVEIRPRVSGYITRVAFTEGTEVRRGEVLFEIDPRPYAADLARAEAELERTRTTAALAARDVSRAQRLVEARAISREEFDTRVTAEAEGAAAVRVAE-AALATARLNLEWTEVRSPIAGRVSRAAVTVGNLVQEGPPSATLLTTVVSVDPIYAYVDGDEQTYLKYAAFARADARAGREPVYLGLANEQGFPHKGYLDFVDNRLNPETGTIRLRAVFPNKERLFTPGLFARLKL-AGSGHYRAPLILDGAIGTDQDKKFVLVLNPDSTLAYRPVQLGPLVQGLRVVATG 343
BLAST of mRNA_P-wetherbeei_contig17588.1.1 vs. uniprot
Match: A0A534D4Z3_9GAMM (Efflux RND transporter periplasmic adaptor subunit n=7 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A534D4Z3_9GAMM) HSP 1 Score: 266 bits (679), Expect = 5.470e-83 Identity = 158/313 (50.48%), Postives = 208/313 (66.45%), Query Frame = 1
Query: 76 VSVAAALTQDVQDSDEFPGRIEATQAVKVRARVNGYLNKVLFTPGTEVKQGEVLFEIDPRPFKAKVGEAEAALAATVAQLDLAKLEAARQQQMLSSHATSRREFDAATALVKSLEASRAANRATLANVRLDLEFTRVTAPISGRVGKDEVTVGNLVQGENPDSPVLTTLVSVDPIYVSFEADERAFLKYIATSR-----GQSLPVQVGLIDETGFPHQAKLQFVDNNVDVASGTVRMRALLDNAARRFTPGLFARVRIEAATGARRVVLVADRAIGTDQSKRFVLVVGDDKLAAYREVHIGRKVGNLRIIESG 999
V+VAAA+++ V + DEF GR EA + V+VR RV+GY++ V FT G+E+K+G+VLF IDPRP+ A+ +A A LA E R Q++S HA SR EFD T+ + +A+ A +A L L+LEFTRVTAPI+GR+ + VT GN V +LTTLVS+DPIYVSF+ DE+ +LKY SR G++ PVQVGL DE+G+PHQ + FVDN +D A+GT+R RALLDN R FTPGLFAR+R+ A VL+ D A+GTDQ+ R+VLVVG A YR V +G V LR++ESG
Sbjct: 42 VTVAAAISRKVTEFDEFTGRFEAVERVEVRPRVSGYISSVNFTDGSEIKKGDVLFVIDPRPYVAERDKARAQLAQXXXXXXXXXSERDRATQLVSQHAISREEFDTRTSGSEQAQANVEAAQAALDAAALNLEFTRVTAPIAGRISRALVTSGNFVTN---GQTLLTTLVSLDPIYVSFDGDEKVYLKYTKLSRDGAHDGRN-PVQVGLADESGYPHQGVMVFVDNALDPATGTIRSRALLDNGDRLFTPGLFARLRLLGAHE-HEAVLINDSAVGTDQTVRYVLVVGAGNKAEYRPVQLGPIVDGLRVVESG 349 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17588.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17588.1.1 >prot_P-wetherbeei_contig17588.1.1 ID=prot_P-wetherbeei_contig17588.1.1|Name=mRNA_P-wetherbeei_contig17588.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=333bp LALFLSACQPPAPPSAAGPAAAPPPVSVAAALTQDVQDSDEFPGRIEATQback to top mRNA from alignment at P-wetherbeei_contig17588:1..999- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17588.1.1 ID=mRNA_P-wetherbeei_contig17588.1.1|Name=mRNA_P-wetherbeei_contig17588.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=999bp|location=Sequence derived from alignment at P-wetherbeei_contig17588:1..999- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17588:1..999- >mRNA_P-wetherbeei_contig17588.1.1 ID=mRNA_P-wetherbeei_contig17588.1.1|Name=mRNA_P-wetherbeei_contig17588.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=999bp|location=Sequence derived from alignment at P-wetherbeei_contig17588:1..999- (Phaeothamnion wetherbeei SAG_119_79)back to top |