mRNA_P-wetherbeei_contig17584.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17584.1.1 vs. uniprot
Match: A0A835ZHV4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHV4_9STRA) HSP 1 Score: 160 bits (405), Expect = 4.370e-46 Identity = 84/144 (58.33%), Postives = 107/144 (74.31%), Query Frame = 1
Query: 1 SLENDLDAIDDLVMDRPPAVGRDKVKVFGAWLDSDVAGRKAAKGNRAAHLKAKAARGEELTNAEKGEARTQLVFYEEAIIFLDRGEYDVGAKLLDRAVGYVGEDSRRGGEFKLWLVTALQGVRQDDHAVEVLKRLKFHGEKAFR 432
+LE + D +DD+VMDRP GRD+VK++GAWLD+D+AGR N+AA LKAKAA GE LT+ EKGE VFYEEAII++ +GEYD +LL RAV +VGEDSRRGGEFKLWL ALQGV +D AV +L+ ++ H ++ R
Sbjct: 54 TLEEEFDELDDMVMDRPANKGRDQVKIWGAWLDADIAGRNVGSPNKAAALKAKAAAGEALTDREKGE-----VFYEEAIIYMGKGEYDTAQELLRRAVAFVGEDSRRGGEFKLWLAQALQGVLDNDGAVTLLRSMRTHPDRDVR 192
BLAST of mRNA_P-wetherbeei_contig17584.1.1 vs. uniprot
Match: D7FPX2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPX2_ECTSI) HSP 1 Score: 153 bits (387), Expect = 2.090e-43 Identity = 85/138 (61.59%), Postives = 99/138 (71.74%), Query Frame = 1
Query: 1 SLENDLDAIDDLVMDRPPAVGRDKVKVFGAWLDSDVAGRKAAKGNRAAHLKAKAARGEELTNAEKGEARTQLVFYEEAIIFLDRGEYDVGAKLLDRAVGYVGEDSRRGGEFKLWLVTALQGVRQDDHAVEVLKRLKFH 414
SLE LDAIDD+ MDR P GR+KVK+FGAWLD+DVAGRKA +GNRAA L A+ GEELT+ EK E +FYEEAI + R + D LLD+AV G DSRRGGEFKLW ALQGV +++ AVEVLK LK H
Sbjct: 62 SLEESLDAIDDVFMDRLPGEGREKVKIFGAWLDADVAGRKAGQGNRAAGLIARMKNGEELTDQEKAE-----IFYEEAIALMRRRDCDASVALLDKAVDLAGADSRRGGEFKLWAAQALQGVNRNNQAVEVLKSLKSH 194
BLAST of mRNA_P-wetherbeei_contig17584.1.1 vs. uniprot
Match: A0A7S2V7T9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7T9_9STRA) HSP 1 Score: 117 bits (293), Expect = 3.400e-29 Identity = 66/142 (46.48%), Postives = 96/142 (67.61%), Query Frame = 1
Query: 10 NDLDAIDDLVMDRPPAVGRD-KVKVFGAWLDSDVAGRKAAKGNRAAHLKAKAARGEELTNAEKGEARTQLVFYEEAIIFLDRGEYDVGAKLLDRAVGYVGEDSRRGGEFKLWLVTALQGVRQDDHAVEVLKRLKFHGEKAFR 432
++LD IDDL M+R P D +V+V+GAWLDSD+AGRK A ++ L++K +GE+L +AEK E +F+EEA+ +++ G+YDV KL+ RAV Y G DSRRGG+F+LWL L Q A+++L+ LK H ++ R
Sbjct: 84 DELDVIDDLSMNRSPNDDGDGRVRVYGAWLDSDIAGRKVA--SKTKELRSKMNKGEQLEDAEKAE-----IFFEEAVGYMNSGKYDVSVKLIQRAVEYAGWDSRRGGQFELWLAQGLYAEGQIPDAIKLLRGLKVHRDRDVR 218
BLAST of mRNA_P-wetherbeei_contig17584.1.1 vs. uniprot
Match: A0A6V1UNI6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UNI6_HETAK) HSP 1 Score: 103 bits (258), Expect = 4.680e-24 Identity = 63/143 (44.06%), Postives = 87/143 (60.84%), Query Frame = 1
Query: 4 LENDLDAIDDLVMDRPPAVGRDKVKVFGAWLDSDVAGRKAAKGNRAAHLKAKAARGEELTNAEKGEARTQLVFYEEAIIFLDRGEYDVGAKLLDRAVGYVGEDSRRGGEFKLWLVTALQGVRQDDHAVEVLKRLKFHGEKAFR 432
LE +LD IDD+ M R + RD+VKV+GAWLD+D+AGRKA + +KAK A GE L E+GE +F+EEA+ ++RG Y L+++AV Y G +S RGG F+LWL A+ + + A E LK L H + R
Sbjct: 82 LEKELDLIDDITMGRSE-MERDQVKVYGAWLDADIAGRKAGDNRK---IKAKLASGERLAPEERGE-----IFFEEAVKAMNRGRYAESVALIEQAVRYAGRESTRGGGFRLWLAQAVYAQGRREGAREGLKALGTHPDSNIR 215
BLAST of mRNA_P-wetherbeei_contig17584.1.1 vs. uniprot
Match: A0A7S2BT75_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BT75_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 1.550e-16 Identity = 55/138 (39.86%), Postives = 76/138 (55.07%), Query Frame = 1
Query: 4 LENDLDAIDDLVMDRPPAVGRDKVKVFGAWLDSDVAGRKAAKGNRAAHLKAKAARGEELTNAEKGEARTQLVFYEEAIIFLDRGEYDVGAKLLDRAVGYVG-EDSRRGGEFKLWLVTALQGVRQDDHAVEVLKRLKFH 414
+E ++D IDDL M+RP +GRDKVK++G WLD+D+ GRKA K N+AA L T+ + + +F + + GEY L +RAVG VG SRRGGE LW A+ A+ +LK L+ H
Sbjct: 13 VEEEMDRIDDLSMNRPANIGRDKVKMWGVWLDADLVGRKAGK-NQAAFL----------TDEVDDDTMAERIF-SVGVTQMKLGEYAAAGGLFNRAVGLVGGSSSRRGGEIALWEAQAVHANGDVAAALRLLKGLEQH 138
BLAST of mRNA_P-wetherbeei_contig17584.1.1 vs. uniprot
Match: A0A2V3J3V9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3V9_9FLOR) HSP 1 Score: 70.1 bits (170), Expect = 1.750e-11 Identity = 52/155 (33.55%), Postives = 76/155 (49.03%), Query Frame = 1
Query: 1 SLENDLDAIDDLVMDRPPAVGRDKVKVFGAWLDSDVAGRKAAKGNRAAHLKAKAARGEELTNAEKGEARTQLVFYEEAI-----IF------LDRGEYDVGAKLLDRAVGYVGEDSRRGGEFKLWLVTALQGVRQDDHAVEVLKRLKFHGEKAFR 432
SL +D+D +DD++ DR P ++VK+FGAWLD +AGRKA K KA G + +A + V EEA+ IF ++G Y L A G VG SR GG+++LW +L +A +L+ L+ H + R
Sbjct: 54 SLPDDIDQMDDILFDRAPN-NVNQVKLFGAWLDDALAGRKARKNLTPTD---KAVSGSDQADASVQSHKKASVSAEEAVEHSSAIFAKGMTMFNKGFYRQSTALFSEAAGIVGHGSRLGGQYQLWHAQSLDAAGDKRNAASLLESLRMHADPDVR 204 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17584.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17584.1.1 >prot_P-wetherbeei_contig17584.1.1 ID=prot_P-wetherbeei_contig17584.1.1|Name=mRNA_P-wetherbeei_contig17584.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=145bp SLENDLDAIDDLVMDRPPAVGRDKVKVFGAWLDSDVAGRKAAKGNRAAHLback to top mRNA from alignment at P-wetherbeei_contig17584:755..1419+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17584.1.1 ID=mRNA_P-wetherbeei_contig17584.1.1|Name=mRNA_P-wetherbeei_contig17584.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=665bp|location=Sequence derived from alignment at P-wetherbeei_contig17584:755..1419+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17584:755..1419+ >mRNA_P-wetherbeei_contig17584.1.1 ID=mRNA_P-wetherbeei_contig17584.1.1|Name=mRNA_P-wetherbeei_contig17584.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=435bp|location=Sequence derived from alignment at P-wetherbeei_contig17584:755..1419+ (Phaeothamnion wetherbeei SAG_119_79)back to top |