mRNA_P-wetherbeei_contig17499.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17499.1.1 vs. uniprot
Match: A0A7Z9UAK1_9BACT (TatD family deoxyribonuclease n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9UAK1_9BACT) HSP 1 Score: 239 bits (609), Expect = 9.660e-76 Identity = 119/236 (50.42%), Postives = 160/236 (67.80%), Query Frame = 1
Query: 19 VLQRAQSLSVRALVLPSTNLESSRRIAEMAHENAALFATVGFHPHQAAEFDPVSSPRELEKLLEGARA--IGETGLEAHYDFCPWEAQLVSLRYHLELAKSSNLPLILHCREAEQALYDELESFGPFPAGGVVHCFTGGWEMGQKFLDLGFHLGVNGIVTLANANQVHEVAKKAPLQRLLLETDGPYLTPKPFRGHRNEPAMIPLIARAVAELREQSVDDIALVTSRNSEHLFSLP 720
VL A + V+ + P+ +L+S ++ + + +F VG HPH+A++ + LE+ L+ AR +GETGLE HYDF P E+QL SLR HL++AKS+ +P+ILHCRE E+ LY EL+++ PA GVVHCFTG WE Q+FL+LGFH+G+ GIVT A+ VHEVA++ PL+RLL+ETDGPYL P PFRG N P IP I VAELRE S D I T++N+ +F LP
Sbjct: 23 VLLNAANAGVKRFIAPALHLDSHTQLCTIEEKFPQVFPAVGVHPHEASDERSEGLHQALEERLDQARVPIVGETGLEGHYDFVPMESQLESLRIHLDVAKSTGVPIILHCRETEELLYQELKTYN-LPAAGVVHCFTGTWEWAQRFLELGFHIGLTGIVTFKKADDVHEVARQIPLERLLVETDGPYLAPIPFRGKTNMPEYIPHIVNRVAELRESSPDAIGRCTAQNTVDVFRLP 257
BLAST of mRNA_P-wetherbeei_contig17499.1.1 vs. uniprot
Match: A0A6F9E027_9BACL (D-amino acyl-tRNA deacylase n=4 Tax=Kyrpidia TaxID=1129704 RepID=A0A6F9E027_9BACL) HSP 1 Score: 202 bits (515), Expect = 1.540e-61 Identity = 105/237 (44.30%), Postives = 144/237 (60.76%), Query Frame = 1
Query: 7 DWMEVLQRAQSLSVRALVLPSTNLESSRRIAEMAHENAALFATVGFHPHQAAEFDPVSSPRELEKLLEGAR--AIGETGLEAHYDFCPWEAQLVSLRYHLELAKSSNLPLILHCREAEQALYDELESFGPFPAGGVVHCFTGGWEMGQKFLDLGFHLGVNGIVTLANANQVHEVAKKAPLQRLLLETDGPYLTPKPFRGHRNEPAMIPLIARAVAELREQSVDDIALVTSRNSEHLF 711
D E+++RA+ V A+V+P +L SS R E+AH L+A VG HPH A+ D + + L L + R AIGE GL+ HYD P + Q H+ LA+ NLP+I+H REA + L+ G GGV+HCF+G W+M Q+ L LGF+L G VT NA + EVA + P RLL+ETD PYLTP+P+RG RNEPA + L+A +A++RE + +AL T N+ LF
Sbjct: 18 DLAEIVERAEQAGVEAVVVPGYDLPSSERALELAHRFDILYAAVGIHPHDASSADEAAMEK-LRLLAKEDRVVAIGEIGLDYHYDHSPRDVQREVFERHIALARELNLPVIVHDREAHADTLEILKQAGASEVGGVMHCFSGSWDMAQECLHLGFYLSFGGPVTFKNARRPKEVAAQVPEDRLLIETDAPYLTPEPYRGKRNEPAYVALVAETLAKIRETEPEQLALATRENARRLF 253
BLAST of mRNA_P-wetherbeei_contig17499.1.1 vs. uniprot
Match: A0A1N6F131_9BACT (TatD DNase family protein n=1 Tax=Singulisphaera sp. GP187 TaxID=1882752 RepID=A0A1N6F131_9BACT) HSP 1 Score: 200 bits (509), Expect = 1.830e-60 Identity = 106/243 (43.62%), Postives = 148/243 (60.91%), Query Frame = 1
Query: 1 RDDWMEVLQRAQSLSVRALVLPSTNLESSRRIAEMAHENAALFATVGFHPHQAAEFDPVSSPRELEKLLE-GARAIGETGLEAHYDFCPWEAQLVSLRYHLELAKSSNLPLILHCREAEQALYDELESFGPFPAGGVVHCFTGGWEMGQKFLDLGFHLGVNGIVTLANA--NQVHEVAKKAPLQRLLLETDGPYLTPKPFRGHRNEPAMIPLIARAVAELREQSVDDIALVTSRNSEHLFSLP 720
RDD VL+RA++ VR +V T S +A++A E+A +FA VG HP+ A+E P R L L E A+GETGL+ H+D P+ Q + HLEL + + LPL++HCRE++Q L +L F P GV+H FTG W+ Q FLDLG H+ G+VT N + + EVA + PL RLL+ETD PYL+P P RG NEPA + A +A++R + D+A +T+ N+ LF+LP
Sbjct: 24 RDDLPAVLERARTAGVRQIVAIGTTANDSESVAQIAREHAGVFAAVGIHPNDASEATPTDWQRVLALLEEPNVVALGETGLDRHWDRTPFPLQQEWFQRHLELGRQTGLPLVIHCRESQQDLIAQLTQFQA-PVHGVLHSFTGSWDDAQAFLDLGLHVSFAGMVTFTNRTLDSLREVAARVPLDRLLVETDSPYLSPHPHRGVSNEPARVTFTAERLAQVRALPLADLAQITTANARRLFNLP 265
BLAST of mRNA_P-wetherbeei_contig17499.1.1 vs. uniprot
Match: UPI000D643CEE (TatD family hydrolase n=1 Tax=Moorella sp. Hama-1 TaxID=2138101 RepID=UPI000D643CEE) HSP 1 Score: 199 bits (507), Expect = 2.400e-60 Identity = 105/239 (43.93%), Postives = 146/239 (61.09%), Query Frame = 1
Query: 7 DWMEVLQRAQSLSVRALVLPSTNLESSRRIAEMAHENAALFATVGFHPHQAAEFDPVSSPRELEKLLEGAR--AIGETGLEAHYDFCPWEAQLVSLRYHLELAKSSNLPLILHCREAEQALYDELESFGPFPAGGVVHCFTGGWEMGQKFLDLGFHLGVNGIVTLANANQVHEVAKKAPLQRLLLETDGPYLTPKPFRGHRNEPAMIPLIARAVAELREQSVDDIALVTSRNSEHLFSL 717
D EV+ R + V LV ++ SSRR E AH + + A V HPH A FD + + L R AIGETGL+ + + P + Q R+HLELA+ LP+I+H R+A + L+ GP PAGGV+HCF+G WEM ++ L+LGF++ G VT NA + +A + PL+RLL+ETD PYLTP+P RGHRNEPA + L+A A+A R Q+V++IA T+ N+ LF +
Sbjct: 19 DLDEVMGRLEEAGVVGLVNVGYDVPSSRRAVEQAHSRSYIHAAVAVHPHDALSFD-AEAEATIRGLARDGRVVAIGETGLDYYRNLSPRQRQQEVFRWHLELAREWRLPVIIHDRDAHEDTLRILKKAGPLPAGGVLHCFSGSWEMARECLELGFYISFAGPVTFKNAVKQRAIAARVPLERLLIETDCPYLTPEPHRGHRNEPAYVGLVAAALAAARGQTVEEIATATATNARQLFGM 256
BLAST of mRNA_P-wetherbeei_contig17499.1.1 vs. uniprot
Match: A0A7C2VIZ6_9BACT (TatD family deoxyribonuclease n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7C2VIZ6_9BACT) HSP 1 Score: 197 bits (501), Expect = 2.690e-59 Identity = 114/247 (46.15%), Postives = 148/247 (59.92%), Query Frame = 1
Query: 4 DDWMEVLQRAQSLSVRALVLPSTNLESS----RRIAEMAHENAALFATVGFHPHQAAEFDPVSSPRELEKLLE--GARAIGETGLEAHYDFCPWEAQLVSLRYHLELAKSSNLPLILHCREAEQALYDELESFGPFPAGGVVHCFTGGWEMGQKFLDLGFHLGVNGIVTLAN-ANQVHEVAKKAPLQRLLLETDGPYLTPKPFRGHRNEPAMIPLIARAVAELREQSVDDIALVTSRNSEHLFSLPL 723
+DW + L+RA+++ V A++ +L SS R++ E + A LFA V HPH A + + R L KL + G AIGE GL+ HY F P EAQ + LELA LP+ILH REA + + FG P GV HCFTG W Q +L +GF +G+ GIVT A V EVA K PL+RLLLETD PYLTP P RG RNEPA +PLIA+ +A+ R ++ +A +T RN+ LF LPL
Sbjct: 17 EDWQDALRRAKAVGVIAVINIGYDLPSSERAVRQVGEAPTDGAKLFAAVAVHPHAARGWSDEVAER-LRKLAKQKGVVAIGEIGLDFHYHFSPPEAQYRAFTEQLELAWQLRLPVILHIREAYPEALEVVRRFGK-PVRGVAHCFTGNWGDAQAWLAMGFSIGITGIVTFGRKAEAVSEVATKVPLERLLLETDAPYLTPHPHRGKRNEPAFLPLIAQKIAQCRSVPLERLAAITMRNTISLFDLPL 261
BLAST of mRNA_P-wetherbeei_contig17499.1.1 vs. uniprot
Match: A0A2H6AN19_9BACT (Putative metal-dependent hydrolase YcfH n=2 Tax=Bacteria TaxID=2 RepID=A0A2H6AN19_9BACT) HSP 1 Score: 196 bits (498), Expect = 4.850e-59 Identity = 100/233 (42.92%), Postives = 149/233 (63.95%), Query Frame = 1
Query: 19 VLQRAQSLSVRALVLPSTNLESSRRIAEMAHENAALFATVGFHPHQAAEFDPVSSPRELEKLLEGAR--AIGETGLEAHYDFCPWEAQLVSLRYHLELAKSSNLPLILHCREAEQALYDELESFGPFPAGGVVHCFTGGWEMGQKFLDLGFHLGVNGIVTLANANQVHEVAKKAPLQRLLLETDGPYLTPKPFRGHRNEPAMIPLIARAVAELREQSVDDIALVTSRNSEHLF 711
V++RA + V +V S+NLESS+R E+A +FA VG HPH+A D ELEKLLE + AIGETGL+ HY P E Q+ S + H+ELAK +LPL++H R+A + + L+ GV+HCFTG + +++D+GF++ +GI+T N +++ E A+ P ++LL+ETD PYL P PFRG RNEP+ + +A +AELR + ++ +A T+RN++ LF
Sbjct: 18 VIERALAHGVSRVVAISSNLESSKRTLEIARTFPQVFAAVGVHPHEALSLDK-RVMEELEKLLENTKVVAIGETGLDYHYMNSPREVQIASFKNHIELAKRFSLPLVIHVRDAHEDVVSILKEQISEGIKGVIHCFTGDYLTADRYIDMGFYISFSGIITFKNTDKIREAARMIPPEKLLIETDSPYLAPFPFRGKRNEPSYVVYVAEKIAELRGEPLEKVAEETTRNAKELF 249
BLAST of mRNA_P-wetherbeei_contig17499.1.1 vs. uniprot
Match: UPI001A0A551E (YchF/TatD family DNA exonuclease n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI001A0A551E) HSP 1 Score: 202 bits (513), Expect = 7.200e-59 Identity = 100/244 (40.98%), Postives = 157/244 (64.34%), Query Frame = 1
Query: 4 DDWMEVLQRAQSLSVRALVLPSTNLESSRRIAEMAHENAALFATVGFHPHQAAEFDPVSSPRELEKLLEGAR--AIGETGLEAHYDFCPWEAQLVSLRYHLELAKSSNLPLILHCREAEQALYDELESFGPFPAGGVVHCFTGGWEMGQKFLDLGFHLGVNGIVTLANANQVHEVAKKAPLQRLLLETDGPYLTPKPFRGHRNEPAMIPLIARAVAELREQSVDDIALVTSRNSEHLFSLPLKV 729
DD+ EV+ RAQ+ V+ ++ +T++E SR E+A + ++AT G HPH+A+E +S E+ LL + AIGE GL+ HY+ P E Q + + +A+ + LPL++H R+AE+ D L+ GGV+HCF+G ++ ++ L +GF+L + GIVT A+ +HEV K+ P++R+L+ETD PYL P P RG RNEPA + +A +AE++ S+DD+A +TSRN E LF++ +V
Sbjct: 20 DDFPEVINRAQAARVKKIICAATSVEGSRTSIEIAGKYPFIYATAGIHPHEASEVTK-NSYEEITHLLSHNKVVAIGEVGLDYHYEHSPKEIQQAVFKRFIRMAREAGLPLVVHTRDAEKDTLDILKQERASETGGVIHCFSGTMDLAKQCLKMGFYLSIPGIVTFNKASNLHEVVKEVPIERMLIETDSPYLAPVPHRGKRNEPAYVRHVAEKIAEIKGLSLDDVARITSRNCEQLFNIADRV 262
BLAST of mRNA_P-wetherbeei_contig17499.1.1 vs. uniprot
Match: A0A2H5XG27_9BACT (3'-5' ssDNA/RNA exonuclease TatD n=1 Tax=bacterium HR17 TaxID=2035412 RepID=A0A2H5XG27_9BACT) HSP 1 Score: 196 bits (497), Expect = 1.080e-58 Identity = 114/247 (46.15%), Postives = 147/247 (59.51%), Query Frame = 1
Query: 4 DDWMEVLQRAQSLSVRALVLPSTNLESSRRIAEMAH----ENAALFATVGFHPHQAAEF--DPVSSPRELEKLLEGARAIGETGLEAHYDFCPWEAQLVSLRYHLELAKSSNLPLILHCREAEQALYDELESFGPFPAGGVVHCFTGGWEMGQKFLDLGFHLGVNGIVTLAN-ANQVHEVAKKAPLQRLLLETDGPYLTPKPFRGHRNEPAMIPLIARAVAELREQSVDDIALVTSRNSEHLFSLPL 723
+DW EVL+RA++ V A++ +L SS R + AAL A V HPH+A + D + R+L K AIGE GL+ HY F P AQ + LELA LP+ILH R+A + + FG P GV HCFTG W Q +L++GFH+GV GIVT A V EVA K PL+RLLLETD PYL P P+RG RNEPA +PLIA+ VA+ R + V+ +A T+RN+ LF+L L
Sbjct: 19 EDWQEVLRRAKNAGVTAVINIGYDLLSSERAVTQCESVPPDGAALVAAVAVHPHEAHHWNADVAETLRQLAKHP-SVVAIGEIGLDFHYAFSPPAAQYRAFAEQLELAWQLGLPVILHIRDAYPEALEVVRRFGK-PVKGVAHCFTGTWGEAQAWLEVGFHIGVTGIVTFGRKAETVREVAAKVPLERLLLETDAPYLAPTPYRGKRNEPAYLPLIAQKVAQCRSEPVERLAAATTRNAASLFNLTL 263
BLAST of mRNA_P-wetherbeei_contig17499.1.1 vs. uniprot
Match: A0A2N6BYJ1_9DELT (Hydrolase TatD n=1 Tax=Desulfobulbaceae bacterium TaxID=2053307 RepID=A0A2N6BYJ1_9DELT) HSP 1 Score: 194 bits (494), Expect = 1.780e-58 Identity = 99/242 (40.91%), Postives = 146/242 (60.33%), Query Frame = 1
Query: 4 DDWMEVLQRAQSLSVRALVLPSTNLESSRRIAEMAHENAALFATVGFHPHQAAEFDPVSSPRELEKLLEGARAIG--ETGLEAHYDFCPWEAQLVSLRYHLELAKSSNLPLILHCREAEQALYDELESFGPFPAGGVVHCFTGGWEMGQKFLDLGFHLGVNGIVTLANANQVHEVAKKAPLQRLLLETDGPYLTPKPFRGHRNEPAMIPLIARAVAELREQSVDDIALVTSRNSEHLFSLPL 723
DD +E++ RAQ+ V+ + +L+SS +A + ++A VG HPH A E P + R L +L + IG E G++ D+ P Q + L LAK LP+I+H REA + L+ GPFPAGG++HCF+G E+ ++F+DLGF+L + G+VT A ++ E A PL RLL+ETDGP+L P+P+RG RNEPA A +AEL+ S+D++A T+ N+ LF +PL
Sbjct: 6 DDCLEIIDRAQAAGVKTIFTVGIDLQSSEAAVHLAGRHDNIYALVGIHPHHAREAGPAAY-RRLSELAGDTKVIGYGEIGIDLCKDYAPVALQKKAYLEQLHLAKELELPVIIHDREAHAEIIAGLQEVGPFPAGGLIHCFSGDKEVARRFVDLGFYLSIPGVVTFKKALEIQEAAASIPLDRLLVETDGPFLAPEPWRGKRNEPAYTLYTAEKIAELKNISLDEVARRTTANAARLFQIPL 246
BLAST of mRNA_P-wetherbeei_contig17499.1.1 vs. uniprot
Match: A0A840UZJ8_9DELT (TatD DNase family protein n=1 Tax=Desulfoprunum benzoelyticum TaxID=1506996 RepID=A0A840UZJ8_9DELT) HSP 1 Score: 193 bits (491), Expect = 5.040e-58 Identity = 104/234 (44.44%), Postives = 145/234 (61.97%), Query Frame = 1
Query: 19 VLQRAQSLSVRALVLPSTNLESSRRIAEMAHENAALFATVGFHPHQ---AAEFDPVSSPRELEKLLEGARAIGETGLEAHYDFCPWEAQLVSLRYHLELAKSSNLPLILHCREAEQALYDELESFGPFPAGGVVHCFTGGWEMGQKFLDLGFHLGVNGIVTLANANQVHEVAKKAPLQRLLLETDGPYLTPKPFRGHRNEPAMIPLIARAVAELREQSVDDIALVTSRNSEHLF 711
V++RA+ V ++ +LESS++ +A + + A+VG HPH +AE + R +E+ E GE GL+ +CP E Q R LELAK+ NLP+I+H R+A + + LE GPFPAGGV+HCF+G + M + +DLGF L V GIVT NAN + EVA+K PL LLLETDGP+L P+P+RG RNEPA I A +A+LR S++ +A T+ N+ LF
Sbjct: 11 VIERARQKKVEQIITIGIDLESSKKAVSLAGKYPGVRASVGIHPHDLPSSAESTYAAIVRLVEENREHIAGYGEIGLDYAKMYCPMELQQHHFRIQLELAKTLNLPVIIHDRDAHEDVLRILEQCGPFPAGGVMHCFSGDYTMACRTIDLGFFLSVPGIVTFKNANNLREVARKVPLTSLLLETDGPFLAPQPWRGKRNEPAYILATAACIADLRNISLEHLARTTTANATALF 244 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17499.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17499.1.1 >prot_P-wetherbeei_contig17499.1.1 ID=prot_P-wetherbeei_contig17499.1.1|Name=mRNA_P-wetherbeei_contig17499.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=240bp MEVLQRAQSLSVRALVLPSTNLESSRRIAEMAHENAALFATVGFHPHQAAback to top mRNA from alignment at P-wetherbeei_contig17499:693..1424- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17499.1.1 ID=mRNA_P-wetherbeei_contig17499.1.1|Name=mRNA_P-wetherbeei_contig17499.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=732bp|location=Sequence derived from alignment at P-wetherbeei_contig17499:693..1424- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17499:693..1424- >mRNA_P-wetherbeei_contig17499.1.1 ID=mRNA_P-wetherbeei_contig17499.1.1|Name=mRNA_P-wetherbeei_contig17499.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=720bp|location=Sequence derived from alignment at P-wetherbeei_contig17499:693..1424- (Phaeothamnion wetherbeei SAG_119_79)back to top |